RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, human

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPAS3-204	ENST00000546849	SLC38A10	Q9HBR0	1119 aa		4.23	□□□□□ -1.73
NPAS3-204	ENST00000546849	POLE4	Q9NR33	117 aa		4.23	□□□□□ -1.73
NPAS3-204	ENST00000546849	BATF3	Q9NR55	127 aa		4.23	□□□□□ -1.73
NPAS3-204	ENST00000546849	RPL26L1	Q9UNX3	145 aa	Known RBP	4.23	□□□□□ -1.73
NPAS3-204	ENST00000546849	ARL2BP	Q9Y2Y0	163 aa		4.23	□□□□□ -1.73
NPAS3-204	ENST00000546849	ATRX	P46100	2492 aa		4.23	□□□□□ -1.73
NPAS3-204	ENST00000546849	TRANK1	O15050	2925 aa		4.23	□□□□□ -1.73
NPAS3-204	ENST00000546849	ZDBF2	Q9HCK1	2354 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	PAPPA2	Q9BXP8	1791 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	CDK5RAP2	Q96SN8	1893 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849		A6NIZ1	184 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849		A8MUA0	341 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	DCTN6	O00399	190 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	SLC16A4	O15374	487 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	MBTPS2	O43462	519 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	PROSC	O94903	275 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	STAMBP	O95630	424 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	OXSR1	O95747	527 aa	Predicted RBP	4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	LGI1	O95970	557 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	OPN1MW	P04001	364 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	OPN1MW2	P0DN77	364 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	OPN1MW3	P0DN78	364 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	GCLM	P48507	274 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	CASP4	P49662	377 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	KPNA2	P52292	529 aa	Known RBP	4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	TAS2R19	P59542	299 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	MYL6	P60660	151 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	PRPS1	P60891	318 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	RAP1B	P61224	184 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	MAGOH	P61326	146 aa	Known RBP	4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	GNB2	P62879	340 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	CCNA1	P78396	465 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	CYP24A1	Q07973	514 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	IFT88	Q13099	833 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	GPM6B	Q13491	265 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	KLF17	Q5JT82	389 aa	Predicted RBP	4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	HHAT	Q5VTY9	493 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	KCTD16	Q68DU8	428 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	C11orf71	Q6IPW1	123 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	DNAJC24	Q6P3W2	148 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	TMIGD1	Q6UXZ0	262 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	KATNAL2	Q8IYT4	538 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	PDIK1L	Q8N165	341 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	MFSD9	Q8NBP5	474 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	FBXO30	Q8TB52	745 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	CDKL2	Q92772	493 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	CCDC127	Q96BQ5	260 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	CYYR1	Q96J86	154 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	PPP1R2P1	Q96PQ5	205 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	XPO6	Q96QU8	1125 aa	Known RBP	4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	TRIM62	Q9BVG3	475 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	VCX3B	Q9H321	246 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	SUDS3	Q9H7L9	328 aa	Predicted RBP	4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	CYP3A43	Q9HB55	503 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	ZNF302	Q9NR11	478 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	PXMP2	Q9NR77	195 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	FGFR1OP2	Q9NVK5	253 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	SMOX	Q9NWM0	555 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	THUMPD1	Q9NXG2	353 aa	Known RBP	4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	RBAK	Q9NYW8	714 aa	Predicted RBP	4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	CLEC4A	Q9UMR7	237 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	POLDIP2	Q9Y2S7	368 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	SCN4A	P35499	1836 aa		4.22	□□□□□ -1.73
NPAS3-204	ENST00000546849	EXOC1L	A0A1B0GW35	172 aa		4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	FAM47DP	A6NHR8	397 aa		4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849		I3L4J1	428 aa		4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	RIPK2	O43353	540 aa		4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	SNN	O75324	88 aa	Predicted RBP	4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	TTC4	O95801	387 aa		4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	IGHG4	P01861	327 aa		4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	GIP	P09681	153 aa	Predicted RBP	4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	ABO	P16442	354 aa		4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	GLP1R	P43220	463 aa		4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	CEBPD	P49716	269 aa	Predicted RBP	4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	TNFRSF17	Q02223	184 aa		4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	TGFBR3	Q03167	851 aa		4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	PDK2	Q15119	407 aa		4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	TFDP3	Q5H9I0	405 aa		4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	MARCH8	Q5T0T0	291 aa		4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	OR4F3	Q6IEY1	312 aa		4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	SLC26A11	Q86WA9	606 aa		4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	PHF13	Q86YI8	300 aa	Predicted RBP	4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	SLC34A3	Q8N130	599 aa		4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	TMEM161B	Q8NDZ6	487 aa		4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	UBE2E3	Q969T4	207 aa		4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	LRRC39	Q96DD0	335 aa		4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	C12orf42	Q96LP6	360 aa		4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	TSNARE1	Q96NA8	513 aa		4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	SLC38A2	Q96QD8	506 aa		4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	SECISBP2	Q96T21	854 aa	Known RBP	4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	P2RY13	Q9BPV8	354 aa		4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	TMEM43	Q9BTV4	400 aa		4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	ACTR6	Q9GZN1	396 aa		4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	ROGDI	Q9GZN7	287 aa		4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	LRRC40	Q9H9A6	602 aa		4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	MYOZ2	Q9NPC6	264 aa		4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	KCNIP1	Q9NZI2	227 aa		4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	SEC14L3	Q9UDX4	400 aa		4.21	□□□□□ -1.74
NPAS3-204	ENST00000546849	KIF25	Q9UIL4	384 aa		4.21	□□□□□ -1.74

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