RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 NRN1LQ496H8 165 aa11.68□□□□□ -0.54
RAB5B-203ENST00000546810 BEX5Q5H9J7 111 aa11.68□□□□□ -0.54
RAB5B-203ENST00000546810 SLC27A4Q6P1M0 643 aa11.68□□□□□ -0.54
RAB5B-203ENST00000546810 LEG1Q6P5S2 330 aa11.68□□□□□ -0.54
RAB5B-203ENST00000546810 SLC25A47Q6Q0C1 308 aa11.68□□□□□ -0.54
RAB5B-203ENST00000546810 ZNF627Q7L945 461 aa11.68□□□□□ -0.54
RAB5B-203ENST00000546810 PQLC1Q8N2U9 271 aa11.68□□□□□ -0.54
RAB5B-203ENST00000546810 PARP8Q8N3A8 854 aa11.68□□□□□ -0.54
RAB5B-203ENST00000546810 LNX2Q8N448 690 aa11.68□□□□□ -0.54
RAB5B-203ENST00000546810 OR52N5Q8NH56 324 aa11.68□□□□□ -0.54
RAB5B-203ENST00000546810 ZNF837Q96EG3 531 aaPredicted RBP11.68□□□□□ -0.54
RAB5B-203ENST00000546810 RBM4BQ9BQ04 359 aaKnown RBP11.68□□□□□ -0.54
RAB5B-203ENST00000546810 RBM4Q9BWF3 364 aaKnown RBP11.68□□□□□ -0.54
RAB5B-203ENST00000546810 PLA2G12AQ9BZM1 189 aa11.68□□□□□ -0.54
RAB5B-203ENST00000546810 KCNN2Q9H2S1 579 aa11.68□□□□□ -0.54
RAB5B-203ENST00000546810 TMEM38BQ9NVV0 291 aa11.68□□□□□ -0.54
RAB5B-203ENST00000546810 VSX1Q9NZR4 365 aaPredicted RBP11.68□□□□□ -0.54
RAB5B-203ENST00000546810 REV1Q9UBZ9 1251 aa11.68□□□□□ -0.54
RAB5B-203ENST00000546810 KLHL21Q9UJP4 597 aa11.68□□□□□ -0.54
RAB5B-203ENST00000546810 ORC6Q9Y5N6 252 aa11.68□□□□□ -0.54
RAB5B-203ENST00000546810 A0A096LPE4 126 aa11.67□□□□□ -0.54
RAB5B-203ENST00000546810 ARPC4-TTLL3A0A0A6YYG9 625 aa11.67□□□□□ -0.54
RAB5B-203ENST00000546810 A0A1W2PPZ6 126 aa11.67□□□□□ -0.54
RAB5B-203ENST00000546810 H7C1C5 153 aa11.67□□□□□ -0.54
RAB5B-203ENST00000546810 SLC2A10O95528 541 aa11.67□□□□□ -0.54
RAB5B-203ENST00000546810 THBDP07204 575 aa11.67□□□□□ -0.54
RAB5B-203ENST00000546810 OR8G3PP0DMU2 310 aa11.67□□□□□ -0.54
RAB5B-203ENST00000546810 HIST1H1CP16403 213 aaKnown RBP11.67□□□□□ -0.54
RAB5B-203ENST00000546810 GRK5P34947 590 aa11.67□□□□□ -0.54
RAB5B-203ENST00000546810 LCN6P62502 163 aa11.67□□□□□ -0.54
RAB5B-203ENST00000546810 ESRRGP62508 458 aa11.67□□□□□ -0.54
RAB5B-203ENST00000546810 PGGHGQ32M88 737 aa11.67□□□□□ -0.54
RAB5B-203ENST00000546810 HIKESHIQ53FT3 197 aa11.67□□□□□ -0.54
RAB5B-203ENST00000546810 SLC35F1Q5T1Q4 408 aa11.67□□□□□ -0.54
RAB5B-203ENST00000546810 ZNF704Q6ZNC4 412 aaPredicted RBP11.67□□□□□ -0.54
RAB5B-203ENST00000546810 ZNF771Q7L3S4 317 aaPredicted RBP11.67□□□□□ -0.54
RAB5B-203ENST00000546810 DPPA2Q7Z7J5 298 aa11.67□□□□□ -0.54
RAB5B-203ENST00000546810 ZNF611Q8N823 705 aa11.67□□□□□ -0.54
RAB5B-203ENST00000546810 OR52E2Q8NGJ4 325 aa11.67□□□□□ -0.54
RAB5B-203ENST00000546810 OR8D4Q8NGM9 314 aa11.67□□□□□ -0.54
RAB5B-203ENST00000546810 OR4K13Q8NH42 304 aa11.67□□□□□ -0.54
RAB5B-203ENST00000546810 NSMAFQ92636 917 aa11.67□□□□□ -0.54
RAB5B-203ENST00000546810 C9orf16Q9BUW7 83 aa11.67□□□□□ -0.54
RAB5B-203ENST00000546810 PRRG3Q9BZD7 231 aa11.67□□□□□ -0.54
RAB5B-203ENST00000546810 ESRP2Q9H6T0 727 aaKnown RBP11.67□□□□□ -0.54
RAB5B-203ENST00000546810 SLC25A15Q9Y619 301 aa11.67□□□□□ -0.54
RAB5B-203ENST00000546810 A0A1W2PPL8 197 aa11.66□□□□□ -0.54
RAB5B-203ENST00000546810 RIIAD1A6NNX1 92 aa11.66□□□□□ -0.54
RAB5B-203ENST00000546810 H0YHG0 523 aa11.66□□□□□ -0.54
RAB5B-203ENST00000546810 SLC16A7O60669 478 aa11.66□□□□□ -0.54
RAB5B-203ENST00000546810 KHDRBS3O75525 346 aaKnown RBP11.66□□□□□ -0.54
RAB5B-203ENST00000546810 SEC14L2O76054 403 aa11.66□□□□□ -0.54
RAB5B-203ENST00000546810 UBL3O95164 117 aa11.66□□□□□ -0.54
RAB5B-203ENST00000546810 HMGN1P05114 100 aa11.66□□□□□ -0.54
RAB5B-203ENST00000546810 IGFBP1P08833 259 aaPredicted RBP11.66□□□□□ -0.54
RAB5B-203ENST00000546810 B4GALT1P15291 398 aa11.66□□□□□ -0.54
RAB5B-203ENST00000546810 ZNF3P17036 446 aa11.66□□□□□ -0.54
RAB5B-203ENST00000546810 IGFBP5P24593 272 aa11.66□□□□□ -0.54
RAB5B-203ENST00000546810 CDKN2AP42771 156 aaKnown RBP11.66□□□□□ -0.54
RAB5B-203ENST00000546810 GIPRP48546 466 aa11.66□□□□□ -0.54
RAB5B-203ENST00000546810 CRISP1P54107 249 aa11.66□□□□□ -0.54
RAB5B-203ENST00000546810 MRPS34P82930 218 aaKnown RBP11.66□□□□□ -0.54
RAB5B-203ENST00000546810 FMODQ06828 376 aa11.66□□□□□ -0.54
RAB5B-203ENST00000546810 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.66□□□□□ -0.54
RAB5B-203ENST00000546810 GINS1Q14691 196 aa11.66□□□□□ -0.54
RAB5B-203ENST00000546810 KDM4DQ6B0I6 523 aa11.66□□□□□ -0.54
RAB5B-203ENST00000546810 TMEM108Q6UXF1 575 aa11.66□□□□□ -0.54
RAB5B-203ENST00000546810 SLC22A24Q8N4F4 322 aa11.66□□□□□ -0.54
RAB5B-203ENST00000546810 WDR31Q8NA23 367 aa11.66□□□□□ -0.54
RAB5B-203ENST00000546810 NMD3Q96D46 503 aaKnown RBP11.66□□□□□ -0.54
RAB5B-203ENST00000546810 TRMT61AQ96FX7 289 aaKnown RBP11.66□□□□□ -0.54
RAB5B-203ENST00000546810 NMNAT3Q96T66 252 aa11.66□□□□□ -0.54
RAB5B-203ENST00000546810 BEX2Q9BXY8 128 aa11.66□□□□□ -0.54
RAB5B-203ENST00000546810 SYT4Q9H2B2 425 aa11.66□□□□□ -0.54
RAB5B-203ENST00000546810 RERGLQ9H628 205 aa11.66□□□□□ -0.54
RAB5B-203ENST00000546810 SEC61A2Q9H9S3 476 aa11.66□□□□□ -0.54
RAB5B-203ENST00000546810 SIAEQ9HAT2 523 aa11.66□□□□□ -0.54
RAB5B-203ENST00000546810 FBXL3Q9UKT7 428 aa11.66□□□□□ -0.54
RAB5B-203ENST00000546810 CR1P17927 2039 aa11.65□□□□□ -0.54
RAB5B-203ENST00000546810 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.65□□□□□ -0.54
RAB5B-203ENST00000546810 A0A1W2PR80 420 aa11.65□□□□□ -0.54
RAB5B-203ENST00000546810 HS3ST1O14792 307 aa11.65□□□□□ -0.54
RAB5B-203ENST00000546810 CD79AP11912 226 aa11.65□□□□□ -0.54
RAB5B-203ENST00000546810 PAICSP22234 425 aaKnown RBP11.65□□□□□ -0.54
RAB5B-203ENST00000546810 THBS2P35442 1172 aa11.65□□□□□ -0.54
RAB5B-203ENST00000546810 CENPAP49450 140 aa11.65□□□□□ -0.54
RAB5B-203ENST00000546810 RAD23AP54725 363 aa11.65□□□□□ -0.54
RAB5B-203ENST00000546810 SRSF2Q01130 221 aaKnown RBP11.65□□□□□ -0.54
RAB5B-203ENST00000546810 DAG1Q14118 895 aa11.65□□□□□ -0.54
RAB5B-203ENST00000546810 RCN1Q15293 331 aa11.65□□□□□ -0.54
RAB5B-203ENST00000546810 SGCAQ16586 387 aa11.65□□□□□ -0.54
RAB5B-203ENST00000546810 SLC36A2Q495M3 483 aa11.65□□□□□ -0.54
RAB5B-203ENST00000546810 C6orf52Q5T4I8 152 aa11.65□□□□□ -0.54
RAB5B-203ENST00000546810 C22orf34Q6ZV56 151 aa11.65□□□□□ -0.54
RAB5B-203ENST00000546810 PTCHD4Q6ZW05 846 aa11.65□□□□□ -0.54
RAB5B-203ENST00000546810 SLC16A14Q7RTX9 510 aa11.65□□□□□ -0.54
RAB5B-203ENST00000546810 GLB1L2Q8IW92 636 aa11.65□□□□□ -0.54
RAB5B-203ENST00000546810 SDR9C7Q8NEX9 313 aa11.65□□□□□ -0.54
RAB5B-203ENST00000546810 OR4Q3Q8NH05 313 aa11.65□□□□□ -0.54
RAB5B-203ENST00000546810 EME1Q96AY2 570 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms