RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 IGFBP1P08833 259 aaPredicted RBP5.56□□□□□ -1.52
PRKDC-211ENST00000546304 OSMP13725 252 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 ANPEPP15144 967 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 PSMB1P20618 241 aaKnown RBP5.56□□□□□ -1.52
PRKDC-211ENST00000546304 IGHV1-2P23083 117 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 IL32P24001 234 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 PEX2P28328 305 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 MPGP29372 298 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 THBS2P35442 1172 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 UGT2B10P36537 528 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 ACVR1BP36896 505 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 CD79BP40259 229 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 DAPP51397 102 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 SH3BGRP55822 239 aaPredicted RBP5.56□□□□□ -1.52
PRKDC-211ENST00000546304 CLRN1P58418 232 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 LCN6P62502 163 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 ROR2Q01974 943 aaKnown RBP5.56□□□□□ -1.52
PRKDC-211ENST00000546304 RUNX1T1Q06455 604 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 FMODQ06828 376 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 FAPQ12884 760 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 DAG1Q14118 895 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 P2RY6Q15077 328 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 TRIP10Q15642 601 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 CR1LQ2VPA4 569 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 PGGHGQ32M88 737 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 RFX4Q33E94 735 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 KDM4DQ6B0I6 523 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 STAC2Q6ZMT1 411 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 LINGO2Q7L985 606 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 ABHD12BQ7Z5M8 362 aaPredicted RBP5.56□□□□□ -1.52
PRKDC-211ENST00000546304 CXorf67Q86X51 503 aaPredicted RBP5.56□□□□□ -1.52
PRKDC-211ENST00000546304 C20orf196Q8IYI0 205 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 LNX2Q8N448 690 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 CBR4Q8N4T8 237 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 IQCF1Q8N6M8 205 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 ARIH2OSQ8N7S6 290 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 SYT14Q8NB59 555 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 OR6N1Q8NGY5 312 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 OR4Q3Q8NH05 313 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 HDAC2Q92769 488 aaKnown RBP5.56□□□□□ -1.52
PRKDC-211ENST00000546304 KISS1RQ969F8 398 aaPredicted RBP5.56□□□□□ -1.52
PRKDC-211ENST00000546304 EME1Q96AY2 570 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 LRR1Q96L50 414 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 Q96M85 177 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 ERMAPQ96PL5 475 aaPredicted RBP5.56□□□□□ -1.52
PRKDC-211ENST00000546304 SPATA25Q9BR10 227 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 C9orf16Q9BUW7 83 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 ALG12Q9BV10 488 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 TSSK6Q9BXA6 273 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 GABARAPL3Q9BY60 117 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 ENKD1Q9H0I2 346 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 DCLRE1BQ9H816 532 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 SMURF2Q9HAU4 748 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 RNPEPL1Q9HAU8 725 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 B3GAT2Q9NPZ5 323 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 TAS2R16Q9NYV7 291 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 USE1Q9NZ43 259 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 GLTPQ9NZD2 209 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 GRHPRQ9UBQ7 328 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 UPB1Q9UBR1 384 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 ENOPH1Q9UHY7 261 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 BAIAP2Q9UQB8 552 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 IER3IP1Q9Y5U9 82 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 FBN2P35556 2912 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 SPG11Q96JI7 2443 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 HEATR1Q9H583 2144 aaKnown RBP5.56□□□□□ -1.52
PRKDC-211ENST00000546304 APCP25054 2843 aa5.56□□□□□ -1.52
PRKDC-211ENST00000546304 PRSS37A4D1T9 235 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 RIIAD1A6NNX1 92 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 PRSS44E7EML9 344 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 C16orf97H3BN30 126 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 RPL36A-HNRNPH2H7BZ11 118 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 C19orf84I3L1E1 186 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 ARHGEF9O43307 516 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 MITFO75030 526 aaPredicted RBP5.55□□□□□ -1.52
PRKDC-211ENST00000546304 RAD51DO75771 328 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 SEC14L2O76054 403 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 SLC2A10O95528 541 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 CLDN1O95832 211 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 ACADSP16219 412 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 HIST1H1CP16403 213 aaKnown RBP5.55□□□□□ -1.52
PRKDC-211ENST00000546304 ZNF3P17036 446 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 IGFBP2P18065 325 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 CDH2P19022 906 aaPredicted RBP5.55□□□□□ -1.52
PRKDC-211ENST00000546304 POU1F1P28069 291 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 GRK5P34947 590 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 PCYT1AP49585 367 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 ALDH3A2P51648 485 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 RAD23AP54725 363 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 FOXG1P55316 489 aaPredicted RBP5.55□□□□□ -1.52
PRKDC-211ENST00000546304 TGFBR3Q03167 851 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 FAM27E3Q08E93 113 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 ITGADQ13349 1161 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 CEACAM16Q2WEN9 425 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 PHYHD1Q5SRE7 291 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 C9orf135Q5VTT2 229 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 SLC27A4Q6P1M0 643 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 LEG1Q6P5S2 330 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 PTCHD4Q6ZW05 846 aa5.55□□□□□ -1.52
PRKDC-211ENST00000546304 BHLHA15Q7RTS1 189 aaPredicted RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms