RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-223	ENST00000544669	RP2	O75695	350 aa		11.74	□□□□□ -0.53
CPSF7-223	ENST00000544669	RLN1	P04808	185 aa		11.74	□□□□□ -0.53
CPSF7-223	ENST00000544669	GLB1	P16278	677 aa		11.74	□□□□□ -0.53
CPSF7-223	ENST00000544669	IGFBP3	P17936	291 aa	Predicted RBP	11.74	□□□□□ -0.53
CPSF7-223	ENST00000544669	CALCR	P30988	508 aa		11.74	□□□□□ -0.53
CPSF7-223	ENST00000544669	SEC61A1	P61619	476 aa	Known RBP	11.74	□□□□□ -0.53
CPSF7-223	ENST00000544669	LCN6	P62502	163 aa		11.74	□□□□□ -0.53
CPSF7-223	ENST00000544669	ZP2	Q05996	745 aa		11.74	□□□□□ -0.53
CPSF7-223	ENST00000544669	DMWD	Q09019	674 aa		11.74	□□□□□ -0.53
CPSF7-223	ENST00000544669	SRSF5	Q13243	272 aa	Known RBP	11.74	□□□□□ -0.53
CPSF7-223	ENST00000544669	PCK2	Q16822	640 aa		11.74	□□□□□ -0.53
CPSF7-223	ENST00000544669	LYPD8	Q6UX82	237 aa		11.74	□□□□□ -0.53
CPSF7-223	ENST00000544669	H1FNT	Q75WM6	255 aa	Predicted RBP	11.74	□□□□□ -0.53
CPSF7-223	ENST00000544669	RHOU	Q7L0Q8	258 aa		11.74	□□□□□ -0.53
CPSF7-223	ENST00000544669	ADGRE4P	Q86SQ3	457 aa		11.74	□□□□□ -0.53
CPSF7-223	ENST00000544669	COMMD7	Q86VX2	200 aa		11.74	□□□□□ -0.53
CPSF7-223	ENST00000544669	FAM160A2	Q8N612	972 aa	Predicted RBP	11.74	□□□□□ -0.53
CPSF7-223	ENST00000544669	ZNF321P	Q8N8H1	164 aa		11.74	□□□□□ -0.53
CPSF7-223	ENST00000544669	OR4C16	Q8NGL9	310 aa		11.74	□□□□□ -0.53
CPSF7-223	ENST00000544669	TNFAIP8L1	Q8WVP5	186 aa		11.74	□□□□□ -0.53
CPSF7-223	ENST00000544669	ASB5	Q8WWX0	329 aa		11.74	□□□□□ -0.53
CPSF7-223	ENST00000544669	NUDT16L1	Q9BRJ7	211 aa	Known RBP	11.74	□□□□□ -0.53
CPSF7-223	ENST00000544669	SEC22C	Q9BRL7	303 aa		11.74	□□□□□ -0.53
CPSF7-223	ENST00000544669	ABHD6	Q9BV23	337 aa		11.74	□□□□□ -0.53
CPSF7-223	ENST00000544669	LMAN1L	Q9HAT1	526 aa		11.74	□□□□□ -0.53
CPSF7-223	ENST00000544669	FANCF	Q9NPI8	374 aa		11.74	□□□□□ -0.53
CPSF7-223	ENST00000544669	PIPOX	Q9P0Z9	390 aa		11.74	□□□□□ -0.53
CPSF7-223	ENST00000544669	NPIPA1	Q9UND3	350 aa		11.74	□□□□□ -0.53
CPSF7-223	ENST00000544669	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	11.74	□□□□□ -0.53
CPSF7-223	ENST00000544669	IGHV1OR21-1	A0A087WYE8	117 aa		11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	CIB4	A0PJX0	185 aa		11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	TMEM200C	A6NKL6	621 aa		11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	SHISA7	A6NL88	538 aa		11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	DISC1	C4P0D8	188 aa		11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	PYCARD-AS1	I3L0S3	204 aa		11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	WNT11	O96014	354 aa		11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	CYB5A	P00167	134 aa		11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	ERCC1	P07992	297 aa	Predicted RBP	11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	PPP3CB	P16298	524 aa		11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	ANXA7	P20073	488 aa	Known RBP	11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	ARRB1	P49407	418 aa	Predicted RBP	11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	INSM1	Q01101	510 aa	Predicted RBP	11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	C1orf100	Q5SVJ3	147 aa		11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	PHF19	Q5T6S3	580 aa		11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	LIN54	Q6MZP7	749 aa		11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	MAMSTR	Q6ZN01	415 aa		11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	NDUFAF7	Q7L592	441 aa		11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	RABEPK	Q7Z6M1	372 aa		11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	CLEC1A	Q8NC01	280 aa		11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	OR2AK2	Q8NG84	335 aa		11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	OR5L2	Q8NGL0	311 aa		11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	OR1J4	Q8NGS1	313 aa		11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	NUBPL	Q8TB37	319 aa		11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	LRRC20	Q8TCA0	184 aa		11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	PIGK	Q92643	395 aa		11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	SLC25A44	Q96H78	314 aa	Predicted RBP	11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	RBP7	Q96R05	134 aa		11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	CHIA	Q9BZP6	476 aa		11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	C1orf198	Q9H425	327 aa		11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	EXO5	Q9H790	373 aa		11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	APMAP	Q9HDC9	416 aa		11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	PRMT8	Q9NR22	394 aa	Predicted RBP	11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	RAB22A	Q9UL26	194 aa		11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669	B3GALT5	Q9Y2C3	310 aa		11.73	□□□□□ -0.53
CPSF7-223	ENST00000544669		A0A1W2PPC1	479 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	LOC390937	A0A1W2PQ73	354 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	RPS10-NUDT3	A0A1W2PQS6	291 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669		H3BUI4	141 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	B3GALNT1	O75752	331 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	CYC1	P08574	325 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	ITGA5	P08648	1049 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	TBP	P20226	339 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	CSNK1E	P49674	416 aa	Known RBP	11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	MMP16	P51512	607 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	DEFB133	Q30KQ1	61 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	TMEM255A	Q5JRV8	349 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	NHLRC3	Q5JS37	347 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	TOR2A	Q5JU69	321 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	KLHL24	Q6TFL4	600 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669		Q6ZS52	159 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	PRR22	Q8IZ63	422 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	OR8K3	Q8NH51	312 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	OR1L3	Q8NH93	324 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	CEP76	Q8TAP6	659 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	SCARB1	Q8WTV0	552 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	ELMOD3	Q96FG2	381 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	SFXN2	Q96NB2	322 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	GAS2L1	Q99501	681 aa	Predicted RBP	11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	PRRT1	Q99946	306 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	SLC7A5P2	Q9GIP4	190 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	SERINC1	Q9NRX5	453 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	OPN4	Q9UHM6	478 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	GLS2	Q9UI32	602 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	MKL2	Q9ULH7	1088 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	GTF2A1L	Q9UNN4	478 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	VSTM2B	A6NLU5	285 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669		I3L521	148 aa		11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	SOX1	O00570	391 aa	Predicted RBP	11.72	□□□□□ -0.53
CPSF7-223	ENST00000544669	PIAS2	O75928	621 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms