RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 TRIM15Q9C019 465 aa9.86□□□□□ -0.83
TMEM258-205ENST00000540434 CXorf56Q9H5V9 222 aa9.86□□□□□ -0.83
TMEM258-205ENST00000540434 NGBQ9NPG2 151 aa9.86□□□□□ -0.83
TMEM258-205ENST00000540434 B3GAT2Q9NPZ5 323 aa9.86□□□□□ -0.83
TMEM258-205ENST00000540434 TMCC3Q9ULS5 477 aa9.86□□□□□ -0.83
TMEM258-205ENST00000540434 SAMHD1Q9Y3Z3 626 aaKnown RBP9.86□□□□□ -0.83
TMEM258-205ENST00000540434 IGHV2OR16-5A0A0B4J2B6 119 aa9.85□□□□□ -0.83
TMEM258-205ENST00000540434 PRSS37A4D1T9 235 aa9.85□□□□□ -0.83
TMEM258-205ENST00000540434 OVOL3O00110 214 aa9.85□□□□□ -0.83
TMEM258-205ENST00000540434 TIPRLO75663 272 aa9.85□□□□□ -0.83
TMEM258-205ENST00000540434 TXNDC12O95881 172 aa9.85□□□□□ -0.83
TMEM258-205ENST00000540434 WNT11O96014 354 aa9.85□□□□□ -0.83
TMEM258-205ENST00000540434 CST1P01037 141 aa9.85□□□□□ -0.83
TMEM258-205ENST00000540434 CCL2P13500 99 aa9.85□□□□□ -0.83
TMEM258-205ENST00000540434 HOXB1P14653 301 aaPredicted RBP9.85□□□□□ -0.83
TMEM258-205ENST00000540434 THBS2P35442 1172 aa9.85□□□□□ -0.83
TMEM258-205ENST00000540434 CDKN1AP38936 164 aa9.85□□□□□ -0.83
TMEM258-205ENST00000540434 PTDSS1P48651 473 aaKnown RBP9.85□□□□□ -0.83
TMEM258-205ENST00000540434 CD47Q08722 323 aa9.85□□□□□ -0.83
TMEM258-205ENST00000540434 TAF11Q15544 211 aa9.85□□□□□ -0.83
TMEM258-205ENST00000540434 MICAQ29983 383 aa9.85□□□□□ -0.83
TMEM258-205ENST00000540434 CLEC12AQ5QGZ9 265 aa9.85□□□□□ -0.83
TMEM258-205ENST00000540434 C6orf52Q5T4I8 152 aa9.85□□□□□ -0.83
TMEM258-205ENST00000540434 DPY19L2P2Q6ZN68 376 aa9.85□□□□□ -0.83
TMEM258-205ENST00000540434 ZNF620Q6ZNG0 422 aa9.85□□□□□ -0.83
TMEM258-205ENST00000540434 FOXL2NBQ6ZUU3 175 aa9.85□□□□□ -0.83
TMEM258-205ENST00000540434 AQP11Q8NBQ7 271 aa9.85□□□□□ -0.83
TMEM258-205ENST00000540434 CPEB3Q8NE35 698 aaKnown RBP9.85□□□□□ -0.83
TMEM258-205ENST00000540434 OR4Q3Q8NH05 313 aa9.85□□□□□ -0.83
TMEM258-205ENST00000540434 RADILQ96JH8 1075 aa9.85□□□□□ -0.83
TMEM258-205ENST00000540434 ZNF570Q96NI8 536 aa9.85□□□□□ -0.83
TMEM258-205ENST00000540434 ALG12Q9BV10 488 aa9.85□□□□□ -0.83
TMEM258-205ENST00000540434 FN3KQ9H479 309 aa9.85□□□□□ -0.83
TMEM258-205ENST00000540434 EMC7Q9NPA0 242 aa9.85□□□□□ -0.83
TMEM258-205ENST00000540434 OBP2BQ9NPH6 170 aa9.85□□□□□ -0.83
TMEM258-205ENST00000540434 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.85□□□□□ -0.83
TMEM258-205ENST00000540434 GRHPRQ9UBQ7 328 aa9.85□□□□□ -0.83
TMEM258-205ENST00000540434 REV1Q9UBZ9 1251 aa9.85□□□□□ -0.83
TMEM258-205ENST00000540434 ATP23Q9Y6H3 246 aa9.85□□□□□ -0.83
TMEM258-205ENST00000540434 ARFGEF3Q5TH69 2177 aa9.85□□□□□ -0.83
TMEM258-205ENST00000540434 RYR3Q15413 4870 aa9.84□□□□□ -0.83
TMEM258-205ENST00000540434 OR6C68A6NDL8 312 aa9.84□□□□□ -0.83
TMEM258-205ENST00000540434 CENPBD1B2RD01 187 aa9.84□□□□□ -0.83
TMEM258-205ENST00000540434 BHLHE40O14503 412 aa9.84□□□□□ -0.83
TMEM258-205ENST00000540434 ATP5HO75947 161 aa9.84□□□□□ -0.83
TMEM258-205ENST00000540434 CCNB2O95067 398 aa9.84□□□□□ -0.83
TMEM258-205ENST00000540434 SOX14O95416 240 aa9.84□□□□□ -0.83
TMEM258-205ENST00000540434 OR8G3PP0DMU2 310 aa9.84□□□□□ -0.83
TMEM258-205ENST00000540434 ZNF35P13682 527 aa9.84□□□□□ -0.83
TMEM258-205ENST00000540434 HIST1H1CP16403 213 aaKnown RBP9.84□□□□□ -0.83
TMEM258-205ENST00000540434 LAP3P28838 519 aa9.84□□□□□ -0.83
TMEM258-205ENST00000540434 SDHAP31040 664 aa9.84□□□□□ -0.83
TMEM258-205ENST00000540434 MRPS34P82930 218 aaKnown RBP9.84□□□□□ -0.83
TMEM258-205ENST00000540434 KRR1Q13601 381 aaKnown RBP9.84□□□□□ -0.83
TMEM258-205ENST00000540434 ENDOGQ14249 297 aaKnown RBP9.84□□□□□ -0.83
TMEM258-205ENST00000540434 SGCAQ16586 387 aa9.84□□□□□ -0.83
TMEM258-205ENST00000540434 GSG1Q2KHT4 349 aa9.84□□□□□ -0.83
TMEM258-205ENST00000540434 THEM4Q5T1C6 240 aa9.84□□□□□ -0.83
TMEM258-205ENST00000540434 SLC35F1Q5T1Q4 408 aa9.84□□□□□ -0.83
TMEM258-205ENST00000540434 HIST2H2BDQ6DRA6 164 aa9.84□□□□□ -0.83
TMEM258-205ENST00000540434 C11orf71Q6IPW1 123 aa9.84□□□□□ -0.83
TMEM258-205ENST00000540434 FAM169BQ8N8A8 192 aa9.84□□□□□ -0.83
TMEM258-205ENST00000540434 OR4K13Q8NH42 304 aa9.84□□□□□ -0.83
TMEM258-205ENST00000540434 FANK1Q8TC84 345 aa9.84□□□□□ -0.83
TMEM258-205ENST00000540434 FBXW5Q969U6 566 aa9.84□□□□□ -0.83
TMEM258-205ENST00000540434 ERMAPQ96PL5 475 aaPredicted RBP9.84□□□□□ -0.83
TMEM258-205ENST00000540434 NMNAT3Q96T66 252 aa9.84□□□□□ -0.83
TMEM258-205ENST00000540434 FEVQ99581 238 aa9.84□□□□□ -0.83
TMEM258-205ENST00000540434 TRAF4Q9BUZ4 470 aaPredicted RBP9.84□□□□□ -0.83
TMEM258-205ENST00000540434 NUAK2Q9H093 628 aa9.84□□□□□ -0.83
TMEM258-205ENST00000540434 SYT4Q9H2B2 425 aa9.84□□□□□ -0.83
TMEM258-205ENST00000540434 REEP1Q9H902 201 aa9.84□□□□□ -0.83
TMEM258-205ENST00000540434 VSX1Q9NZR4 365 aaPredicted RBP9.84□□□□□ -0.83
TMEM258-205ENST00000540434 GDF2Q9UK05 429 aaPredicted RBP9.84□□□□□ -0.83
TMEM258-205ENST00000540434 COA3Q9Y2R0 106 aaPredicted RBP9.84□□□□□ -0.83
TMEM258-205ENST00000540434 TMEM129A0AVI4 362 aa9.83□□□□□ -0.84
TMEM258-205ENST00000540434 A6NIZ1 184 aa9.83□□□□□ -0.84
TMEM258-205ENST00000540434 PSKH1P11801 424 aa9.83□□□□□ -0.84
TMEM258-205ENST00000540434 ZNF32P17041 273 aa9.83□□□□□ -0.84
TMEM258-205ENST00000540434 TTKP33981 857 aa9.83□□□□□ -0.84
TMEM258-205ENST00000540434 THBS4P35443 961 aa9.83□□□□□ -0.84
TMEM258-205ENST00000540434 ARR3P36575 388 aa9.83□□□□□ -0.84
TMEM258-205ENST00000540434 RAP1BP61224 184 aa9.83□□□□□ -0.84
TMEM258-205ENST00000540434 RAP1AP62834 184 aa9.83□□□□□ -0.84
TMEM258-205ENST00000540434 PSG4Q00888 419 aa9.83□□□□□ -0.84
TMEM258-205ENST00000540434 C3orf36Q3SXR2 165 aa9.83□□□□□ -0.84
TMEM258-205ENST00000540434 DTX2Q86UW9 622 aa9.83□□□□□ -0.84
TMEM258-205ENST00000540434 OR6V1Q8N148 313 aa9.83□□□□□ -0.84
TMEM258-205ENST00000540434 NPEPL1Q8NDH3 523 aa9.83□□□□□ -0.84
TMEM258-205ENST00000540434 OR10G2Q8NGC3 310 aa9.83□□□□□ -0.84
TMEM258-205ENST00000540434 AKR7LQ8NHP1 331 aa9.83□□□□□ -0.84
TMEM258-205ENST00000540434 GIPC3Q8TF64 312 aa9.83□□□□□ -0.84
TMEM258-205ENST00000540434 RBP7Q96R05 134 aa9.83□□□□□ -0.84
TMEM258-205ENST00000540434 DHRS9Q9BPW9 319 aa9.83□□□□□ -0.84
TMEM258-205ENST00000540434 IFT27Q9BW83 186 aa9.83□□□□□ -0.84
TMEM258-205ENST00000540434 ZNF416Q9BWM5 594 aa9.83□□□□□ -0.84
TMEM258-205ENST00000540434 DGCR6LQ9BY27 220 aa9.83□□□□□ -0.84
TMEM258-205ENST00000540434 RERGLQ9H628 205 aa9.83□□□□□ -0.84
TMEM258-205ENST00000540434 SIAEQ9HAT2 523 aa9.83□□□□□ -0.84
TMEM258-205ENST00000540434 SMURF2Q9HAU4 748 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms