RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 OR10H3O60404 316 aa12.86□□□□□ -0.35
USB1-203ENST00000539737 ENTPD5O75356 428 aa12.86□□□□□ -0.35
USB1-203ENST00000539737 PGA4P0DJD7 388 aa12.86□□□□□ -0.35
USB1-203ENST00000539737 PGA3P0DJD8 388 aa12.86□□□□□ -0.35
USB1-203ENST00000539737 ARR3P36575 388 aa12.86□□□□□ -0.35
USB1-203ENST00000539737 IDH3GP51553 393 aaPredicted RBP12.86□□□□□ -0.35
USB1-203ENST00000539737 CDH15P55291 814 aa12.86□□□□□ -0.35
USB1-203ENST00000539737 CLRN1P58418 232 aa12.86□□□□□ -0.35
USB1-203ENST00000539737 GK3PQ14409 553 aa12.86□□□□□ -0.35
USB1-203ENST00000539737 CEACAM16Q2WEN9 425 aa12.86□□□□□ -0.35
USB1-203ENST00000539737 ZBED5Q49AG3 693 aa12.86□□□□□ -0.35
USB1-203ENST00000539737 OR2T5Q6IEZ7 315 aa12.86□□□□□ -0.35
USB1-203ENST00000539737 FAM169BQ8N8A8 192 aa12.86□□□□□ -0.35
USB1-203ENST00000539737 LINC01356Q8N9X3 169 aa12.86□□□□□ -0.35
USB1-203ENST00000539737 IL17RDQ8NFM7 739 aa12.86□□□□□ -0.35
USB1-203ENST00000539737 OR2T29Q8NH02 315 aa12.86□□□□□ -0.35
USB1-203ENST00000539737 TMEM54Q969K7 222 aa12.86□□□□□ -0.35
USB1-203ENST00000539737 ZNF837Q96EG3 531 aaPredicted RBP12.86□□□□□ -0.35
USB1-203ENST00000539737 RSRC1Q96IZ7 334 aaKnown RBP12.86□□□□□ -0.35
USB1-203ENST00000539737 TXNIPQ9H3M7 391 aa12.86□□□□□ -0.35
USB1-203ENST00000539737 YY1AP1Q9H869 796 aa12.86□□□□□ -0.35
USB1-203ENST00000539737 REEP1Q9H902 201 aa12.86□□□□□ -0.35
USB1-203ENST00000539737 GLTPQ9NZD2 209 aa12.86□□□□□ -0.35
USB1-203ENST00000539737 POFUT2Q9Y2G5 429 aa12.86□□□□□ -0.35
USB1-203ENST00000539737 UNC119BA6NIH7 251 aa12.85□□□□□ -0.35
USB1-203ENST00000539737 A6NIZ1 184 aa12.85□□□□□ -0.35
USB1-203ENST00000539737 B9A039 149 aa12.85□□□□□ -0.35
USB1-203ENST00000539737 TNFRSF11BO00300 401 aa12.85□□□□□ -0.35
USB1-203ENST00000539737 EBAG9O00559 213 aa12.85□□□□□ -0.35
USB1-203ENST00000539737 NDUFB2O95178 105 aa12.85□□□□□ -0.35
USB1-203ENST00000539737 ADRA2AP08913 450 aa12.85□□□□□ -0.35
USB1-203ENST00000539737 TACSTD2P09758 323 aa12.85□□□□□ -0.35
USB1-203ENST00000539737 CBR1P16152 277 aa12.85□□□□□ -0.35
USB1-203ENST00000539737 FPR3P25089 353 aa12.85□□□□□ -0.35
USB1-203ENST00000539737 RPL4P36578 427 aaKnown RBP12.85□□□□□ -0.35
USB1-203ENST00000539737 CHN2P52757 468 aa12.85□□□□□ -0.35
USB1-203ENST00000539737 HMGA2P52926 109 aa12.85□□□□□ -0.35
USB1-203ENST00000539737 CTXN1P60606 82 aa12.85□□□□□ -0.35
USB1-203ENST00000539737 RAP1BP61224 184 aa12.85□□□□□ -0.35
USB1-203ENST00000539737 RPL27P61353 136 aaKnown RBP12.85□□□□□ -0.35
USB1-203ENST00000539737 RAP1AP62834 184 aa12.85□□□□□ -0.35
USB1-203ENST00000539737 ACTG1P63261 375 aa12.85□□□□□ -0.35
USB1-203ENST00000539737 NPRL3Q12980 569 aa12.85□□□□□ -0.35
USB1-203ENST00000539737 TOP3AQ13472 1001 aaPredicted RBP12.85□□□□□ -0.35
USB1-203ENST00000539737 LAPTM4AQ15012 233 aa12.85□□□□□ -0.35
USB1-203ENST00000539737 LRRC75AQ8NAA5 344 aa12.85□□□□□ -0.35
USB1-203ENST00000539737 FANK1Q8TC84 345 aa12.85□□□□□ -0.35
USB1-203ENST00000539737 DOK1Q99704 481 aa12.85□□□□□ -0.35
USB1-203ENST00000539737 MYOZ1Q9NP98 299 aaPredicted RBP12.85□□□□□ -0.35
USB1-203ENST00000539737 TCRBV3S1A0A5B6 114 aa12.84□□□□□ -0.35
USB1-203ENST00000539737 CIB2O75838 187 aa12.84□□□□□ -0.35
USB1-203ENST00000539737 CCNB2O95067 398 aa12.84□□□□□ -0.35
USB1-203ENST00000539737 CD14P08571 375 aa12.84□□□□□ -0.35
USB1-203ENST00000539737 ACADSP16219 412 aa12.84□□□□□ -0.35
USB1-203ENST00000539737 GIFP27352 417 aa12.84□□□□□ -0.35
USB1-203ENST00000539737 FHL1Q13642 323 aa12.84□□□□□ -0.35
USB1-203ENST00000539737 EFNB3Q15768 340 aa12.84□□□□□ -0.35
USB1-203ENST00000539737 PHYHD1Q5SRE7 291 aa12.84□□□□□ -0.35
USB1-203ENST00000539737 ARMC4Q5T2S8 1044 aa12.84□□□□□ -0.35
USB1-203ENST00000539737 KRT80Q6KB66 452 aa12.84□□□□□ -0.35
USB1-203ENST00000539737 IGFN1Q86VF2 1251 aa12.84□□□□□ -0.35
USB1-203ENST00000539737 WDFY1Q8IWB7 410 aa12.84□□□□□ -0.35
USB1-203ENST00000539737 FNDC8Q8TC99 324 aa12.84□□□□□ -0.35
USB1-203ENST00000539737 CANT1Q8WVQ1 401 aa12.84□□□□□ -0.35
USB1-203ENST00000539737 GPX7Q96SL4 187 aaPredicted RBP12.84□□□□□ -0.35
USB1-203ENST00000539737 FOXB1Q99853 325 aa12.84□□□□□ -0.35
USB1-203ENST00000539737 ALG12Q9BV10 488 aa12.84□□□□□ -0.35
USB1-203ENST00000539737 CHID1Q9BWS9 393 aa12.84□□□□□ -0.35
USB1-203ENST00000539737 RAB1BQ9H0U4 201 aa12.84□□□□□ -0.35
USB1-203ENST00000539737 NOX3Q9HBY0 568 aa12.84□□□□□ -0.35
USB1-203ENST00000539737 CRNNQ9UBG3 495 aaPredicted RBP12.84□□□□□ -0.35
USB1-203ENST00000539737 FZR1Q9UM11 496 aa12.84□□□□□ -0.35
USB1-203ENST00000539737 SIGLEC7Q9Y286 467 aa12.84□□□□□ -0.35
USB1-203ENST00000539737 SAMHD1Q9Y3Z3 626 aaKnown RBP12.84□□□□□ -0.35
USB1-203ENST00000539737 SPEF1Q9Y4P9 236 aa12.84□□□□□ -0.35
USB1-203ENST00000539737 CMYA5Q8N3K9 4069 aa12.84□□□□□ -0.35
USB1-203ENST00000539737 TRMUO75648 421 aaKnown RBP12.83□□□□□ -0.36
USB1-203ENST00000539737 CST1P01037 141 aa12.83□□□□□ -0.36
USB1-203ENST00000539737 CD79AP11912 226 aa12.83□□□□□ -0.36
USB1-203ENST00000539737 PPOXP50336 477 aa12.83□□□□□ -0.36
USB1-203ENST00000539737 CBX1P83916 185 aa12.83□□□□□ -0.36
USB1-203ENST00000539737 HNRNPA0Q13151 305 aaKnown RBP12.83□□□□□ -0.36
USB1-203ENST00000539737 RIN1Q13671 783 aa12.83□□□□□ -0.36
USB1-203ENST00000539737 MAD2L1BPQ15013 274 aaPredicted RBP12.83□□□□□ -0.36
USB1-203ENST00000539737 HIST3H3Q16695 136 aa12.83□□□□□ -0.36
USB1-203ENST00000539737 C1orf146Q5VVC0 180 aa12.83□□□□□ -0.36
USB1-203ENST00000539737 C1orf94Q6P1W5 598 aa12.83□□□□□ -0.36
USB1-203ENST00000539737 PGBD2Q6P3X8 592 aa12.83□□□□□ -0.36
USB1-203ENST00000539737 SMARCD3Q6STE5 483 aa12.83□□□□□ -0.36
USB1-203ENST00000539737 ZNF813Q6ZN06 617 aa12.83□□□□□ -0.36
USB1-203ENST00000539737 ZNF627Q7L945 461 aa12.83□□□□□ -0.36
USB1-203ENST00000539737 ZER1Q7Z7L7 766 aa12.83□□□□□ -0.36
USB1-203ENST00000539737 OR4C15Q8NGM1 316 aa12.83□□□□□ -0.36
USB1-203ENST00000539737 CLDND2Q8NHS1 167 aa12.83□□□□□ -0.36
USB1-203ENST00000539737 ZNF519Q8TB69 540 aa12.83□□□□□ -0.36
USB1-203ENST00000539737 GNPDA2Q8TDQ7 276 aa12.83□□□□□ -0.36
USB1-203ENST00000539737 MS4A3Q96HJ5 214 aa12.83□□□□□ -0.36
USB1-203ENST00000539737 TSPAN32Q96QS1 320 aa12.83□□□□□ -0.36
USB1-203ENST00000539737 MRPL13Q9BYD1 178 aaKnown RBP12.83□□□□□ -0.36
USB1-203ENST00000539737 SMURF2Q9HAU4 748 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms