RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 FBLP22087 321 aaKnown RBP12.64□□□□□ -0.39
UBE3B-210ENST00000539599 MAPK3P27361 379 aaPredicted RBP12.64□□□□□ -0.39
UBE3B-210ENST00000539599 RPL27P61353 136 aaKnown RBP12.64□□□□□ -0.39
UBE3B-210ENST00000539599 OPCMLQ14982 345 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 GLYATL3Q5SZD4 288 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 C1orf140Q5VVS0 124 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 OLFML2AQ68BL7 652 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 CDH24Q86UP0 819 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 ZNF578Q96N58 590 aaPredicted RBP12.64□□□□□ -0.39
UBE3B-210ENST00000539599 EXOSC3Q9NQT5 275 aaKnown RBP12.64□□□□□ -0.39
UBE3B-210ENST00000539599 ZNF230Q9UIE0 474 aaPredicted RBP12.64□□□□□ -0.39
UBE3B-210ENST00000539599 FBXO4Q9UKT5 387 aa12.64□□□□□ -0.39
UBE3B-210ENST00000539599 TRIOBPQ9H2D6 2365 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 ARID1AO14497 2285 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 FXYD6-FXYD2A0A087WZ82 144 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 TCRBV16S1A1N1A0A5B0 115 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 FITM1A5D6W6 292 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 LILRA5A6NI73 299 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 XRCC3O43542 346 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 CREBL2O60519 120 aaPredicted RBP12.63□□□□□ -0.39
UBE3B-210ENST00000539599 RAG2P55895 527 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 COL28A1Q2UY09 1125 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 SLC22A6Q4U2R8 563 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 ZNF626Q68DY1 528 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 TMED4Q7Z7H5 227 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 SLC38A9Q8NBW4 561 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 OR4S1Q8NGB4 309 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 ZNF519Q8TB69 540 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 SUN5Q8TC36 379 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 PHYHIPQ92561 330 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 C8orf44Q96CB5 159 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 CXorf58Q96LI9 332 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 TINAGL1Q9GZM7 467 aaPredicted RBP12.63□□□□□ -0.39
UBE3B-210ENST00000539599 FXYD6Q9H0Q3 95 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 ZNF304Q9HCX3 659 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 MED11Q9P086 117 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 SDK2Q58EX2 2172 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 SLC22A23A1A5C7 686 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 H7C417 338 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 AP3S2P59780 193 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 OR7A5Q15622 319 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 ELAVL1Q15717 326 aaKnown RBP12.63□□□□□ -0.39
UBE3B-210ENST00000539599 C14orf28Q4W4Y0 310 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 MAMDC2Q7Z304 686 aaPredicted RBP12.63□□□□□ -0.39
UBE3B-210ENST00000539599 KCTD20Q7Z5Y7 419 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 GALNT16Q8N428 558 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 JAGN1Q8N5M9 183 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 ASB5Q8WWX0 329 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 FAM46BQ96A09 425 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 DMRTA2Q96SC8 542 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 TMEM138Q9NPI0 162 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 CENPMQ9NSP4 180 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 ZNF224Q9NZL3 707 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 MTFP1Q9UDX5 166 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 UBQLN2Q9UHD9 624 aa12.63□□□□□ -0.39
UBE3B-210ENST00000539599 IGHV1OR21-1A0A087WYE8 117 aa12.62□□□□□ -0.39
UBE3B-210ENST00000539599 SIGLEC5O15389 551 aa12.62□□□□□ -0.39
UBE3B-210ENST00000539599 TIAF1O95411 115 aa12.62□□□□□ -0.39
UBE3B-210ENST00000539599 IFNGR1P15260 489 aa12.62□□□□□ -0.39
UBE3B-210ENST00000539599 BCKDHBP21953 392 aa12.62□□□□□ -0.39
UBE3B-210ENST00000539599 HOXD11P31277 338 aaPredicted RBP12.62□□□□□ -0.39
UBE3B-210ENST00000539599 EGR3Q06889 387 aa12.62□□□□□ -0.39
UBE3B-210ENST00000539599 SIGLEC14Q08ET2 396 aa12.62□□□□□ -0.39
UBE3B-210ENST00000539599 ELFN2Q5R3F8 820 aa12.62□□□□□ -0.39
UBE3B-210ENST00000539599 TMEM225Q6GV28 225 aa12.62□□□□□ -0.39
UBE3B-210ENST00000539599 ANKRD16Q6P6B7 361 aa12.62□□□□□ -0.39
UBE3B-210ENST00000539599 SYT13Q7L8C5 426 aa12.62□□□□□ -0.39
UBE3B-210ENST00000539599 ZNF679Q8IYX0 411 aa12.62□□□□□ -0.39
UBE3B-210ENST00000539599 SDR16C5Q8N3Y7 309 aa12.62□□□□□ -0.39
UBE3B-210ENST00000539599 ADAMTS18Q8TE60 1221 aa12.62□□□□□ -0.39
UBE3B-210ENST00000539599 ZDHHC12Q96GR4 267 aa12.62□□□□□ -0.39
UBE3B-210ENST00000539599 SPACA5Q96QH8 159 aa12.62□□□□□ -0.39
UBE3B-210ENST00000539599 CMKLR1Q99788 373 aa12.62□□□□□ -0.39
UBE3B-210ENST00000539599 FSCN3Q9NQT6 498 aa12.62□□□□□ -0.39
UBE3B-210ENST00000539599 SLC22A11Q9NSA0 550 aa12.62□□□□□ -0.39
UBE3B-210ENST00000539599 CDV3Q9UKY7 258 aaKnown RBP12.62□□□□□ -0.39
UBE3B-210ENST00000539599 DHDHQ9UQ10 334 aa12.62□□□□□ -0.39
UBE3B-210ENST00000539599 ALG1L2C9J202 215 aa12.62□□□□□ -0.39
UBE3B-210ENST00000539599 PDGFAP04085 211 aa12.62□□□□□ -0.39
UBE3B-210ENST00000539599 ZNF28P17035 718 aa12.62□□□□□ -0.39
UBE3B-210ENST00000539599 CD27P26842 260 aa12.62□□□□□ -0.39
UBE3B-210ENST00000539599 RAB11BQ15907 218 aa12.62□□□□□ -0.39
UBE3B-210ENST00000539599 NKPD1Q17RQ9 610 aa12.62□□□□□ -0.39
UBE3B-210ENST00000539599 COL13A1Q5TAT6 717 aaPredicted RBP12.62□□□□□ -0.39
UBE3B-210ENST00000539599 SIGIRRQ6IA17 410 aa12.62□□□□□ -0.39
UBE3B-210ENST00000539599 DCXRQ7Z4W1 244 aa12.62□□□□□ -0.39
UBE3B-210ENST00000539599 ACBD4Q8NC06 268 aa12.62□□□□□ -0.39
UBE3B-210ENST00000539599 SLC25A44Q96H78 314 aaPredicted RBP12.62□□□□□ -0.39
UBE3B-210ENST00000539599 ZNF576Q9H609 170 aa12.62□□□□□ -0.39
UBE3B-210ENST00000539599 AKAP7Q9P0M2 348 aaPredicted RBP12.62□□□□□ -0.39
UBE3B-210ENST00000539599 FARSAQ9Y285 508 aaKnown RBP12.62□□□□□ -0.39
UBE3B-210ENST00000539599 FRYQ5TBA9 3013 aa12.61□□□□□ -0.39
UBE3B-210ENST00000539599 PLSCR5A0PG75 271 aa12.61□□□□□ -0.39
UBE3B-210ENST00000539599 LINC00862A6NCI5 91 aa12.61□□□□□ -0.39
UBE3B-210ENST00000539599 METTL12A8MUP2 240 aa12.61□□□□□ -0.39
UBE3B-210ENST00000539599 L7N2F9 121 aa12.61□□□□□ -0.39
UBE3B-210ENST00000539599 P2RY10O00398 339 aa12.61□□□□□ -0.39
UBE3B-210ENST00000539599 PLPP3O14495 311 aa12.61□□□□□ -0.39
UBE3B-210ENST00000539599 ADAM10O14672 748 aa12.61□□□□□ -0.39
UBE3B-210ENST00000539599 GDF9O60383 454 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms