RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 RNASE12Q5GAN4 147 aaKnown RBP15.33■□□□□ 0.04
PCDHB17P-201ENST00000539533 SLC25A53Q5H9E4 307 aa15.33■□□□□ 0.04
PCDHB17P-201ENST00000539533 TMEM81Q6P7N7 255 aa15.33■□□□□ 0.04
PCDHB17P-201ENST00000539533 TMPRSS12Q86WS5 348 aa15.33■□□□□ 0.04
PCDHB17P-201ENST00000539533 THOC3Q96J01 351 aaKnown RBP15.33■□□□□ 0.04
PCDHB17P-201ENST00000539533 MRGPRX4Q96LA9 322 aa15.33■□□□□ 0.04
PCDHB17P-201ENST00000539533 TSPAN32Q96QS1 320 aa15.33■□□□□ 0.04
PCDHB17P-201ENST00000539533 GRHPRQ9UBQ7 328 aa15.33■□□□□ 0.04
PCDHB17P-201ENST00000539533 FBXO9Q9UK97 447 aaPredicted RBP15.33■□□□□ 0.04
PCDHB17P-201ENST00000539533 ALPK2Q86TB3 2170 aa15.33■□□□□ 0.04
PCDHB17P-201ENST00000539533 BET1O15155 118 aa15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 OR2T1O43869 369 aa15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 SC5DO75845 299 aa15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 TPPPO94811 219 aa15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 SDHAP31040 664 aa15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 SGCBQ16585 318 aa15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 LEG1Q6P5S2 330 aa15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 ZNF417Q8TAU3 575 aa15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 ZMYND19Q96E35 227 aaPredicted RBP15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 C4orf36Q96KX1 117 aa15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 ZNF587Q96SQ5 575 aaPredicted RBP15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 CACNG6Q9BXT2 260 aa15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 TMEM185BQ9H7F4 350 aa15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 PTGES2Q9H7Z7 377 aa15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 ADGRL4Q9HBW9 690 aa15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 COPZ2Q9P299 210 aa15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 ZNF346Q9UL40 294 aaKnown RBP15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 CLEC4AQ9UMR7 237 aa15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 RPS10-NUDT3A0A1W2PQS6 291 aa15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 J3QLW9 94 aa15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 F10P00742 488 aa15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 PLGP00747 810 aaPredicted RBP15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 APEHP13798 732 aaKnown RBP15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 ZNF19P17023 458 aa15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 IL32P24001 234 aa15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 ACVR1BP36896 505 aa15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 TAS2R43P59537 309 aa15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 DGCR2P98153 550 aa15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 RPTNQ6XPR3 784 aa15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 HDDC2Q7Z4H3 204 aa15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 DND1Q8IYX4 353 aaKnown RBP15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 KDM8Q8N371 416 aa15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 ADAMTS14Q8WXS8 1223 aa15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 PGLYRP3Q96LB9 341 aa15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 JSRP1Q96MG2 331 aaPredicted RBP15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 SORCS2Q96PQ0 1159 aa15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 SLC6A5Q9Y345 797 aa15.32■□□□□ 0.04
PCDHB17P-201ENST00000539533 H7C1C5 153 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 ZNF208O43345 1280 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 DXOO77932 396 aaKnown RBP15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 UBL3O95164 117 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 SBK2P0C263 348 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 RAB3BP20337 219 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 CCR6P51684 374 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 LCN6P62502 163 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 EXOSC2Q13868 293 aaKnown RBP15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 OR7A5Q15622 319 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 GSG1Q2KHT4 349 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 ACSM3Q53FZ2 586 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 HSD17B12Q53GQ0 312 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 GPR139Q6DWJ6 353 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 C5orf46Q6UWT4 87 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 BEST3Q8N1M1 668 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 NTNG2Q96CW9 530 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 DDIT4LQ96D03 193 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 ZFP3Q96NJ6 502 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 TSSK2Q96PF2 358 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 NMNAT2Q9BZQ4 307 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 LIN7BQ9HAP6 207 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 MED12Q93074 2177 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 FAM171A2A8MVW0 826 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 PLPP3O14495 311 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 GPR171O14626 319 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 TXNDC12O95881 172 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 SPI1P17947 270 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 MMP15P51511 669 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 OR12D2P58182 307 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 GRK1Q15835 563 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 MESTQ5EB52 335 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 JAZF1Q86VZ6 243 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 MS4A3Q96HJ5 214 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 SGCZQ96LD1 299 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 HAO2Q9NYQ3 351 aa15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 RPH3AQ9Y2J0 694 aaPredicted RBP15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 MRPS7Q9Y2R9 242 aaKnown RBP15.31■□□□□ 0.04
PCDHB17P-201ENST00000539533 MEIKINA0A087WXM9 373 aa15.3■□□□□ 0.04
PCDHB17P-201ENST00000539533 CDRT15L2A8MXV6 281 aa15.3■□□□□ 0.04
PCDHB17P-201ENST00000539533 HCCSP53701 268 aa15.3■□□□□ 0.04
PCDHB17P-201ENST00000539533 ZNF85Q03923 595 aa15.3■□□□□ 0.04
PCDHB17P-201ENST00000539533 ST3GAL2Q16842 350 aa15.3■□□□□ 0.04
PCDHB17P-201ENST00000539533 CLLU1Q5K131 121 aa15.3■□□□□ 0.04
PCDHB17P-201ENST00000539533 DCAF10Q5QP82 559 aa15.3■□□□□ 0.04
PCDHB17P-201ENST00000539533 ZNF227Q86WZ6 799 aa15.3■□□□□ 0.04
PCDHB17P-201ENST00000539533 DTX1Q86Y01 620 aa15.3■□□□□ 0.04
PCDHB17P-201ENST00000539533 HAVCR2Q8TDQ0 301 aa15.3■□□□□ 0.04
PCDHB17P-201ENST00000539533 GIMAP1Q8WWP7 306 aa15.3■□□□□ 0.04
PCDHB17P-201ENST00000539533 CLEC4MQ9H2X3 399 aaPredicted RBP15.3■□□□□ 0.04
PCDHB17P-201ENST00000539533 CNTRLQ7Z7A1 2325 aa15.3■□□□□ 0.04
PCDHB17P-201ENST00000539533 A0A0B4J203 849 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 A0A0G2JMM0 328 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms