RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 CTSFQ9UBX1 484 aa4.09□□□□□ -1.75
TRAV11-201ENST00000539512 TRMT112Q9UI30 125 aaKnown RBP4.09□□□□□ -1.75
TRAV11-201ENST00000539512 FRMPD3Q5JV73 1810 aa4.09□□□□□ -1.76
TRAV11-201ENST00000539512 CTAGE15A4D2H0 777 aa4.08□□□□□ -1.76
TRAV11-201ENST00000539512 H0YHG0 523 aa4.08□□□□□ -1.76
TRAV11-201ENST00000539512 AP3B1O00203 1094 aa4.08□□□□□ -1.76
TRAV11-201ENST00000539512 MRPS12O15235 138 aaKnown RBP4.08□□□□□ -1.76
TRAV11-201ENST00000539512 DPM1O60762 260 aa4.08□□□□□ -1.76
TRAV11-201ENST00000539512 ZNF324O75467 553 aaPredicted RBP4.08□□□□□ -1.76
TRAV11-201ENST00000539512 OR2J3O76001 311 aa4.08□□□□□ -1.76
TRAV11-201ENST00000539512 CTDNEP1O95476 244 aa4.08□□□□□ -1.76
TRAV11-201ENST00000539512 PRB2P02812 416 aaPredicted RBP4.08□□□□□ -1.76
TRAV11-201ENST00000539512 GNAO1P09471 354 aa4.08□□□□□ -1.76
TRAV11-201ENST00000539512 PGAM1P18669 254 aa4.08□□□□□ -1.76
TRAV11-201ENST00000539512 RAB3BP20337 219 aa4.08□□□□□ -1.76
TRAV11-201ENST00000539512 PPM1LQ5SGD2 360 aa4.08□□□□□ -1.76
TRAV11-201ENST00000539512 CARD17Q5XLA6 110 aa4.08□□□□□ -1.76
TRAV11-201ENST00000539512 SASS6Q6UVJ0 657 aa4.08□□□□□ -1.76
TRAV11-201ENST00000539512 ZYG11AQ6WRX3 759 aa4.08□□□□□ -1.76
TRAV11-201ENST00000539512 CTAGE6Q86UF2 777 aa4.08□□□□□ -1.76
TRAV11-201ENST00000539512 PGAM4Q8N0Y7 254 aa4.08□□□□□ -1.76
TRAV11-201ENST00000539512 OR10G2Q8NGC3 310 aa4.08□□□□□ -1.76
TRAV11-201ENST00000539512 SLC38A4Q969I6 547 aa4.08□□□□□ -1.76
TRAV11-201ENST00000539512 LRRC58Q96CX6 371 aa4.08□□□□□ -1.76
TRAV11-201ENST00000539512 WFIKKN1Q96NZ8 548 aa4.08□□□□□ -1.76
TRAV11-201ENST00000539512 OR2A5Q96R48 311 aa4.08□□□□□ -1.76
TRAV11-201ENST00000539512 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.08□□□□□ -1.76
TRAV11-201ENST00000539512 PITPNC1Q9UKF7 332 aa4.08□□□□□ -1.76
TRAV11-201ENST00000539512 GTF3C1Q12789 2109 aa4.07□□□□□ -1.76
TRAV11-201ENST00000539512 RTL8CO15255 209 aa4.07□□□□□ -1.76
TRAV11-201ENST00000539512 CCNB1P14635 433 aa4.07□□□□□ -1.76
TRAV11-201ENST00000539512 ZNF250P15622 560 aa4.07□□□□□ -1.76
TRAV11-201ENST00000539512 ZNF823P16415 610 aa4.07□□□□□ -1.76
TRAV11-201ENST00000539512 CSNK1A1P48729 337 aa4.07□□□□□ -1.76
TRAV11-201ENST00000539512 IGFL3Q6UXB1 125 aa4.07□□□□□ -1.76
TRAV11-201ENST00000539512 NCCRP1Q6ZVX7 275 aaPredicted RBP4.07□□□□□ -1.76
TRAV11-201ENST00000539512 H1FOOQ8IZA3 346 aaPredicted RBP4.07□□□□□ -1.76
TRAV11-201ENST00000539512 OR5W2Q8NH69 310 aa4.07□□□□□ -1.76
TRAV11-201ENST00000539512 SYNPRQ8TBG9 265 aa4.07□□□□□ -1.76
TRAV11-201ENST00000539512 RAB3IL1Q8TBN0 382 aa4.07□□□□□ -1.76
TRAV11-201ENST00000539512 RNF139Q8WU17 664 aa4.07□□□□□ -1.76
TRAV11-201ENST00000539512 PDXPQ96GD0 296 aa4.07□□□□□ -1.76
TRAV11-201ENST00000539512 OR5B12Q96R08 314 aa4.07□□□□□ -1.76
TRAV11-201ENST00000539512 MN1Q10571 1320 aaPredicted RBP4.06□□□□□ -1.76
TRAV11-201ENST00000539512 MAPK8IP3Q9UPT6 1336 aa4.06□□□□□ -1.76
TRAV11-201ENST00000539512 SRP72O76094 671 aaKnown RBP4.06□□□□□ -1.76
TRAV11-201ENST00000539512 AGTP01019 485 aa4.06□□□□□ -1.76
TRAV11-201ENST00000539512 FTH1P02794 183 aa4.06□□□□□ -1.76
TRAV11-201ENST00000539512 SERPINA5P05154 406 aa4.06□□□□□ -1.76
TRAV11-201ENST00000539512 WARSP23381 471 aaKnown RBP4.06□□□□□ -1.76
TRAV11-201ENST00000539512 SLC1A1P43005 524 aa4.06□□□□□ -1.76
TRAV11-201ENST00000539512 PRMT2P55345 433 aa4.06□□□□□ -1.76
TRAV11-201ENST00000539512 RCN1Q15293 331 aa4.06□□□□□ -1.76
TRAV11-201ENST00000539512 KRTAP13-3Q3SY46 172 aa4.06□□□□□ -1.76
TRAV11-201ENST00000539512 PRAMEF20Q5VT98 475 aa4.06□□□□□ -1.76
TRAV11-201ENST00000539512 CERS6Q6ZMG9 384 aa4.06□□□□□ -1.76
TRAV11-201ENST00000539512 SLC16A14Q7RTX9 510 aa4.06□□□□□ -1.76
TRAV11-201ENST00000539512 DNAJC1Q96KC8 554 aaKnown RBP4.06□□□□□ -1.76
TRAV11-201ENST00000539512 HRASLS2Q9NWW9 162 aa4.06□□□□□ -1.76
TRAV11-201ENST00000539512 ZNF222Q9UK12 451 aa4.06□□□□□ -1.76
TRAV11-201ENST00000539512 HECW2Q9P2P5 1572 aa4.06□□□□□ -1.76
TRAV11-201ENST00000539512 ERLIN1O75477 346 aa4.05□□□□□ -1.76
TRAV11-201ENST00000539512 KRT14P02533 472 aa4.05□□□□□ -1.76
TRAV11-201ENST00000539512 AQP2P41181 271 aa4.05□□□□□ -1.76
TRAV11-201ENST00000539512 VSX2P58304 361 aaPredicted RBP4.05□□□□□ -1.76
TRAV11-201ENST00000539512 SRSF5Q13243 272 aaKnown RBP4.05□□□□□ -1.76
TRAV11-201ENST00000539512 SF3A2Q15428 464 aaKnown RBP4.05□□□□□ -1.76
TRAV11-201ENST00000539512 HSP90AB3PQ58FF7 597 aa4.05□□□□□ -1.76
TRAV11-201ENST00000539512 BIVMQ86UB2 503 aa4.05□□□□□ -1.76
TRAV11-201ENST00000539512 FBXL13Q8NEE6 735 aa4.05□□□□□ -1.76
TRAV11-201ENST00000539512 FAM81AQ8TBF8 368 aa4.05□□□□□ -1.76
TRAV11-201ENST00000539512 ABHD3Q8WU67 409 aa4.05□□□□□ -1.76
TRAV11-201ENST00000539512 NTAN1Q96AB6 310 aa4.05□□□□□ -1.76
TRAV11-201ENST00000539512 C20orf24Q9BUV8 137 aa4.05□□□□□ -1.76
TRAV11-201ENST00000539512 RPP21Q9H633 154 aaKnown RBP4.05□□□□□ -1.76
TRAV11-201ENST00000539512 HMG20AQ9NP66 347 aa4.05□□□□□ -1.76
TRAV11-201ENST00000539512 TRIM64CA6NLI5 447 aa4.04□□□□□ -1.76
TRAV11-201ENST00000539512 LYRM9A8MSI8 78 aa4.04□□□□□ -1.76
TRAV11-201ENST00000539512 SIRPB1O00241 398 aa4.04□□□□□ -1.76
TRAV11-201ENST00000539512 VAMP5O95183 116 aa4.04□□□□□ -1.76
TRAV11-201ENST00000539512 ACSM4P0C7M7 580 aa4.04□□□□□ -1.76
TRAV11-201ENST00000539512 IGFBP3P17936 291 aaPredicted RBP4.04□□□□□ -1.76
TRAV11-201ENST00000539512 PSMC3P17980 439 aa4.04□□□□□ -1.76
TRAV11-201ENST00000539512 DCKP27707 260 aa4.04□□□□□ -1.76
TRAV11-201ENST00000539512 CSNK1EP49674 416 aaKnown RBP4.04□□□□□ -1.76
TRAV11-201ENST00000539512 RGS8P57771 180 aaPredicted RBP4.04□□□□□ -1.76
TRAV11-201ENST00000539512 LINC00315P59091 139 aa4.04□□□□□ -1.76
TRAV11-201ENST00000539512 RAB10P61026 200 aa4.04□□□□□ -1.76
TRAV11-201ENST00000539512 TGM3Q08188 693 aa4.04□□□□□ -1.76
TRAV11-201ENST00000539512 RGNQ15493 299 aa4.04□□□□□ -1.76
TRAV11-201ENST00000539512 FAM83EQ2M2I3 478 aa4.04□□□□□ -1.76
TRAV11-201ENST00000539512 ARL9Q6T311 187 aa4.04□□□□□ -1.76
TRAV11-201ENST00000539512 OR4A4PQ8NGN8 299 aa4.04□□□□□ -1.76
TRAV11-201ENST00000539512 ELMO1Q92556 727 aa4.04□□□□□ -1.76
TRAV11-201ENST00000539512 MICU1Q9BPX6 476 aa4.04□□□□□ -1.76
TRAV11-201ENST00000539512 NECAP2Q9NVZ3 263 aa4.04□□□□□ -1.76
TRAV11-201ENST00000539512 ERCC6L2Q5T890 1561 aa4.04□□□□□ -1.76
TRAV11-201ENST00000539512 KLHL41O60662 606 aa4.03□□□□□ -1.76
TRAV11-201ENST00000539512 BCHEP06276 602 aa4.03□□□□□ -1.76
TRAV11-201ENST00000539512 TLX1NBP0CAT3 122 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms