RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 MITFO75030 526 aaPredicted RBP13.64□□□□□ -0.23
RPAIN-206ENST00000539417 ENTPD5O75356 428 aa13.64□□□□□ -0.23
RPAIN-206ENST00000539417 FARS2O95363 451 aaKnown RBP13.64□□□□□ -0.23
RPAIN-206ENST00000539417 NPR2P20594 1047 aa13.64□□□□□ -0.23
RPAIN-206ENST00000539417 DNASE1P24855 282 aa13.64□□□□□ -0.23
RPAIN-206ENST00000539417 FASP25445 335 aa13.64□□□□□ -0.23
RPAIN-206ENST00000539417 NOS3P29474 1203 aa13.64□□□□□ -0.23
RPAIN-206ENST00000539417 MEP1BQ16820 701 aa13.64□□□□□ -0.23
RPAIN-206ENST00000539417 FAM27BQ5VT28 67 aa13.64□□□□□ -0.23
RPAIN-206ENST00000539417 ACSM5Q6NUN0 579 aa13.64□□□□□ -0.23
RPAIN-206ENST00000539417 FAHD1Q6P587 224 aa13.64□□□□□ -0.23
RPAIN-206ENST00000539417 C20orf204Q6ZNR8 217 aa13.64□□□□□ -0.23
RPAIN-206ENST00000539417 YTHDF3Q7Z739 585 aaKnown RBP13.64□□□□□ -0.23
RPAIN-206ENST00000539417 JAZF1Q86VZ6 243 aa13.64□□□□□ -0.23
RPAIN-206ENST00000539417 LNX2Q8N448 690 aa13.64□□□□□ -0.23
RPAIN-206ENST00000539417 SLC37A3Q8NCC5 494 aa13.64□□□□□ -0.23
RPAIN-206ENST00000539417 OR52L1Q8NGH7 329 aa13.64□□□□□ -0.23
RPAIN-206ENST00000539417 OR5K1Q8NHB7 308 aa13.64□□□□□ -0.23
RPAIN-206ENST00000539417 AKR7LQ8NHP1 331 aa13.64□□□□□ -0.23
RPAIN-206ENST00000539417 NANOS1Q8WY41 292 aaKnown RBP13.64□□□□□ -0.23
RPAIN-206ENST00000539417 NINJ1Q92982 152 aa13.64□□□□□ -0.23
RPAIN-206ENST00000539417 CCL19Q99731 98 aa13.64□□□□□ -0.23
RPAIN-206ENST00000539417 PKP2Q99959 881 aa13.64□□□□□ -0.23
RPAIN-206ENST00000539417 RNF121Q9H920 327 aa13.64□□□□□ -0.23
RPAIN-206ENST00000539417 POU2F3Q9UKI9 436 aa13.64□□□□□ -0.23
RPAIN-206ENST00000539417 ZNF469Q96JG9 3925 aaPredicted RBP13.64□□□□□ -0.23
RPAIN-206ENST00000539417 PLCE1Q9P212 2302 aa13.63□□□□□ -0.23
RPAIN-206ENST00000539417 IDH3BO43837 385 aa13.63□□□□□ -0.23
RPAIN-206ENST00000539417 KHDRBS3O75525 346 aaKnown RBP13.63□□□□□ -0.23
RPAIN-206ENST00000539417 RAB36O95755 333 aa13.63□□□□□ -0.23
RPAIN-206ENST00000539417 CRYAAP02489 173 aa13.63□□□□□ -0.23
RPAIN-206ENST00000539417 GAAP10253 952 aa13.63□□□□□ -0.23
RPAIN-206ENST00000539417 NR2C1P13056 603 aa13.63□□□□□ -0.23
RPAIN-206ENST00000539417 ZNF35P13682 527 aa13.63□□□□□ -0.23
RPAIN-206ENST00000539417 POU1F1P28069 291 aa13.63□□□□□ -0.23
RPAIN-206ENST00000539417 PYCR1P32322 319 aa13.63□□□□□ -0.23
RPAIN-206ENST00000539417 PSG4Q00888 419 aa13.63□□□□□ -0.23
RPAIN-206ENST00000539417 COX10Q12887 443 aa13.63□□□□□ -0.23
RPAIN-206ENST00000539417 CRMP1Q14194 572 aa13.63□□□□□ -0.23
RPAIN-206ENST00000539417 TESK1Q15569 626 aa13.63□□□□□ -0.23
RPAIN-206ENST00000539417 MSMPQ1L6U9 139 aa13.63□□□□□ -0.23
RPAIN-206ENST00000539417 DEFB113Q30KQ7 82 aa13.63□□□□□ -0.23
RPAIN-206ENST00000539417 PABPC1L2AQ5JQF8 200 aa13.63□□□□□ -0.23
RPAIN-206ENST00000539417 TMEM236Q5W0B7 351 aa13.63□□□□□ -0.23
RPAIN-206ENST00000539417 RPL13AP3Q6NVV1 102 aa13.63□□□□□ -0.23
RPAIN-206ENST00000539417 LYPD4Q6UWN0 246 aa13.63□□□□□ -0.23
RPAIN-206ENST00000539417 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.63□□□□□ -0.23
RPAIN-206ENST00000539417 ATG16L2Q8NAA4 619 aa13.63□□□□□ -0.23
RPAIN-206ENST00000539417 C11orf40Q8WZ69 217 aa13.63□□□□□ -0.23
RPAIN-206ENST00000539417 NRBF2Q96F24 287 aa13.63□□□□□ -0.23
RPAIN-206ENST00000539417 WNT5BQ9H1J7 359 aa13.63□□□□□ -0.23
RPAIN-206ENST00000539417 H3BN98 237 aa13.62□□□□□ -0.23
RPAIN-206ENST00000539417 SERPINA5P05154 406 aa13.62□□□□□ -0.23
RPAIN-206ENST00000539417 CST2P09228 141 aa13.62□□□□□ -0.23
RPAIN-206ENST00000539417 CLUP10909 449 aa13.62□□□□□ -0.23
RPAIN-206ENST00000539417 PSKH1P11801 424 aa13.62□□□□□ -0.23
RPAIN-206ENST00000539417 OSMP13725 252 aa13.62□□□□□ -0.23
RPAIN-206ENST00000539417 ANXA8P13928 327 aa13.62□□□□□ -0.23
RPAIN-206ENST00000539417 MSR1P21757 451 aa13.62□□□□□ -0.23
RPAIN-206ENST00000539417 APEX1P27695 318 aaKnown RBP13.62□□□□□ -0.23
RPAIN-206ENST00000539417 ART1P52961 327 aa13.62□□□□□ -0.23
RPAIN-206ENST00000539417 SLC36A2Q495M3 483 aa13.62□□□□□ -0.23
RPAIN-206ENST00000539417 KRT80Q6KB66 452 aa13.62□□□□□ -0.23
RPAIN-206ENST00000539417 VHLLQ6RSH7 139 aa13.62□□□□□ -0.23
RPAIN-206ENST00000539417 OR2T33Q8NG76 320 aa13.62□□□□□ -0.23
RPAIN-206ENST00000539417 OR51L1Q8NGJ5 315 aa13.62□□□□□ -0.23
RPAIN-206ENST00000539417 OR9Q1Q8NGQ5 310 aa13.62□□□□□ -0.23
RPAIN-206ENST00000539417 MBD6Q96DN6 1003 aa13.62□□□□□ -0.23
RPAIN-206ENST00000539417 SNX18Q96RF0 628 aa13.62□□□□□ -0.23
RPAIN-206ENST00000539417 DHRS9Q9BPW9 319 aa13.62□□□□□ -0.23
RPAIN-206ENST00000539417 HCAR1Q9BXC0 346 aa13.62□□□□□ -0.23
RPAIN-206ENST00000539417 MED20Q9H944 212 aa13.62□□□□□ -0.23
RPAIN-206ENST00000539417 LOC100509620A0A075B734 347 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 SAC3D1A6NKF1 404 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 G3V2T6 193 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 GPRIN2O60269 458 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 RENP00797 406 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 TFP02787 698 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 GYPBP06028 91 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 ZNF23P17027 643 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 TTKP33981 857 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 THBS4P35443 961 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 CDKN1AP38936 164 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 CENPAP49450 140 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 FABP6P51161 128 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 NKX6-1P78426 367 aaPredicted RBP13.61□□□□□ -0.23
RPAIN-206ENST00000539417 GINS1Q14691 196 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 MST1LQ2TV78 715 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 ZNF774Q6NX45 483 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 TMEM53Q6P2H8 277 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 ZBTB46Q86UZ6 589 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 KRTAP1-3Q8IUG1 177 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 GLB1L2Q8IW92 636 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 TEX47Q8TBZ9 253 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 TRAF4Q9BUZ4 470 aaPredicted RBP13.61□□□□□ -0.23
RPAIN-206ENST00000539417 RBM4Q9BWF3 364 aaKnown RBP13.61□□□□□ -0.23
RPAIN-206ENST00000539417 OR2H1Q9GZK4 316 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 CCNB1IP1Q9NPC3 277 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 OAZ3Q9UMX2 235 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 RTTNQ86VV8 2226 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms