RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 PERPQ96FX8 193 aa11.83□□□□□ -0.52
CD9-208ENST00000538834 SAMD8Q96LT4 415 aa11.83□□□□□ -0.52
CD9-208ENST00000538834 C1orf198Q9H425 327 aa11.83□□□□□ -0.52
CD9-208ENST00000538834 NTN4Q9HB63 628 aa11.83□□□□□ -0.52
CD9-208ENST00000538834 POLE4Q9NR33 117 aa11.83□□□□□ -0.52
CD9-208ENST00000538834 CDH10Q9Y6N8 788 aa11.83□□□□□ -0.52
CD9-208ENST00000538834 NIPBLQ6KC79 2804 aaeCLIP11.83□□□□□ -0.52
CD9-208ENST00000538834 SETD2Q9BYW2 2564 aaPredicted RBP11.83□□□□□ -0.52
CD9-208ENST00000538834 B9A039 149 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 H7C1C5 153 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 CCNB2O95067 398 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 PPP1R3DO95685 299 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 CD99P14209 185 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 ZNF32P17041 273 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 PCSK6P29122 969 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 SLC6A6P31641 620 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 SERPINF1P36955 418 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 RASSF2P50749 326 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 RPS6KA3P51812 740 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 LCN6P62502 163 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 HIST1H3AP68431 136 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 PSG4Q00888 419 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 NPRL3Q12980 569 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 FLOT2Q14254 428 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 HIST2H3PS2Q5TEC6 136 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 RPL13AP3Q6NVV1 102 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 HIST2H3AQ71DI3 136 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 YTHDF3Q7Z739 585 aaKnown RBP11.82□□□□□ -0.52
CD9-208ENST00000538834 LNX2Q8N448 690 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 PAQR4Q8N4S7 273 aaPredicted RBP11.82□□□□□ -0.52
CD9-208ENST00000538834 NPEPL1Q8NDH3 523 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 FANK1Q8TC84 345 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 NSMAFQ92636 917 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 UTP4Q969X6 686 aaKnown RBP11.82□□□□□ -0.52
CD9-208ENST00000538834 TRMT61AQ96FX7 289 aaKnown RBP11.82□□□□□ -0.52
CD9-208ENST00000538834 POM121L2Q96KW2 1035 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 LRGUKQ96M69 825 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 CACNG6Q9BXT2 260 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 PLA2G12AQ9BZM1 189 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 NDEL1Q9GZM8 345 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 NUAK2Q9H093 628 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 WNT5BQ9H1J7 359 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 SYT4Q9H2B2 425 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 REEP1Q9H902 201 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 REV1Q9UBZ9 1251 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 GDF2Q9UK05 429 aaPredicted RBP11.82□□□□□ -0.52
CD9-208ENST00000538834 POU2F3Q9UKI9 436 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 MALRD1Q5VYJ5 2156 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.82□□□□□ -0.52
CD9-208ENST00000538834 ZFHX3Q15911 3703 aa11.82□□□□□ -0.52
CD9-208ENST00000538834 ABCA2Q9BZC7 2435 aa11.81□□□□□ -0.52
CD9-208ENST00000538834 LOC100509620A0A075B734 347 aa11.81□□□□□ -0.52
CD9-208ENST00000538834 A0A096LNT2 108 aa11.81□□□□□ -0.52
CD9-208ENST00000538834 XKRYO14609 159 aa11.81□□□□□ -0.52
CD9-208ENST00000538834 FKBP6O75344 327 aa11.81□□□□□ -0.52
CD9-208ENST00000538834 RAB36O95755 333 aa11.81□□□□□ -0.52
CD9-208ENST00000538834 CST1P01037 141 aa11.81□□□□□ -0.52
CD9-208ENST00000538834 GAAP10253 952 aa11.81□□□□□ -0.52
CD9-208ENST00000538834 HIST1H1CP16403 213 aaKnown RBP11.81□□□□□ -0.52
CD9-208ENST00000538834 MSR1P21757 451 aa11.81□□□□□ -0.52
CD9-208ENST00000538834 LAP3P28838 519 aa11.81□□□□□ -0.52
CD9-208ENST00000538834 CAPZA2P47755 286 aa11.81□□□□□ -0.52
CD9-208ENST00000538834 ATP5J2P56134 94 aa11.81□□□□□ -0.52
CD9-208ENST00000538834 LSM6P62312 80 aaKnown RBP11.81□□□□□ -0.52
CD9-208ENST00000538834 COX10Q12887 443 aa11.81□□□□□ -0.52
CD9-208ENST00000538834 DAG1Q14118 895 aa11.81□□□□□ -0.52
CD9-208ENST00000538834 PABPC1L2AQ5JQF8 200 aa11.81□□□□□ -0.52
CD9-208ENST00000538834 TMEM53Q6P2H8 277 aa11.81□□□□□ -0.52
CD9-208ENST00000538834 UGT2A3Q6UWM9 527 aa11.81□□□□□ -0.52
CD9-208ENST00000538834 OR6V1Q8N148 313 aa11.81□□□□□ -0.52
CD9-208ENST00000538834 LRRC18Q8N456 261 aa11.81□□□□□ -0.52
CD9-208ENST00000538834 GTPBP3Q969Y2 492 aaKnown RBP11.81□□□□□ -0.52
CD9-208ENST00000538834 COX4I2Q96KJ9 171 aa11.81□□□□□ -0.52
CD9-208ENST00000538834 ERMAPQ96PL5 475 aaPredicted RBP11.81□□□□□ -0.52
CD9-208ENST00000538834 NIPSNAP1Q9BPW8 284 aa11.81□□□□□ -0.52
CD9-208ENST00000538834 ZNF416Q9BWM5 594 aa11.81□□□□□ -0.52
CD9-208ENST00000538834 OR2H1Q9GZK4 316 aa11.81□□□□□ -0.52
CD9-208ENST00000538834 RACGAP1Q9H0H5 632 aa11.81□□□□□ -0.52
CD9-208ENST00000538834 EGLN3Q9H6Z9 239 aa11.81□□□□□ -0.52
CD9-208ENST00000538834 B9D1Q9UPM9 204 aa11.81□□□□□ -0.52
CD9-208ENST00000538834 SAMHD1Q9Y3Z3 626 aaKnown RBP11.81□□□□□ -0.52
CD9-208ENST00000538834 ANK3Q12955 4377 aaKnown RBP11.81□□□□□ -0.52
CD9-208ENST00000538834 IGLV3-9A0A075B6K5 115 aa11.8□□□□□ -0.52
CD9-208ENST00000538834 OR6C68A6NDL8 312 aa11.8□□□□□ -0.52
CD9-208ENST00000538834 SOCS2O14508 198 aa11.8□□□□□ -0.52
CD9-208ENST00000538834 KHDRBS3O75525 346 aaKnown RBP11.8□□□□□ -0.52
CD9-208ENST00000538834 PTHP01270 115 aa11.8□□□□□ -0.52
CD9-208ENST00000538834 OR4A8P0C604 315 aa11.8□□□□□ -0.52
CD9-208ENST00000538834 COX5BP10606 129 aa11.8□□□□□ -0.52
CD9-208ENST00000538834 ZNF250P15622 560 aa11.8□□□□□ -0.52
CD9-208ENST00000538834 GSTM3P21266 225 aa11.8□□□□□ -0.52
CD9-208ENST00000538834 PPOXP50336 477 aa11.8□□□□□ -0.52
CD9-208ENST00000538834 SNTB2Q13425 540 aaKnown RBP11.8□□□□□ -0.52
CD9-208ENST00000538834 SGCAQ16586 387 aa11.8□□□□□ -0.52
CD9-208ENST00000538834 CIARTQ8N365 385 aaPredicted RBP11.8□□□□□ -0.52
CD9-208ENST00000538834 AQP11Q8NBQ7 271 aa11.8□□□□□ -0.52
CD9-208ENST00000538834 SLC30A7Q8NEW0 376 aa11.8□□□□□ -0.52
CD9-208ENST00000538834 OR10H5Q8NGA6 315 aa11.8□□□□□ -0.52
CD9-208ENST00000538834 MRPL24Q96A35 216 aaKnown RBP11.8□□□□□ -0.52
CD9-208ENST00000538834 Q96MF0 132 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms