RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 CDKN2AP42771 156 aaKnown RBP6.41□□□□□ -1.38
MSH6-209ENST00000538136 ATP5J2P56134 94 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 SPOCK1Q08629 439 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 ACSF3Q4G176 576 aaPredicted RBP6.41□□□□□ -1.38
MSH6-209ENST00000538136 COQ5Q5HYK3 327 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 AVPI1Q5T686 147 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 MTFR2Q6P444 385 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 FAM57AQ8TBR7 257 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 HGDQ93099 445 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 ITFG2Q969R8 447 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 SLC25A44Q96H78 314 aaPredicted RBP6.41□□□□□ -1.38
MSH6-209ENST00000538136 BCL2L14Q9BZR8 327 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 TINAGL1Q9GZM7 467 aaPredicted RBP6.41□□□□□ -1.38
MSH6-209ENST00000538136 NTMQ9P121 344 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 SLC22A13Q9Y226 551 aa6.41□□□□□ -1.38
MSH6-209ENST00000538136 IGHV3OR16-10A0A075B7F0 116 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 A0A0G2JNJ9 132 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 A0A1B0GUH1 482 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 ZNF670-ZNF695F2Z2N8 137 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 TRMUO75648 421 aaKnown RBP6.4□□□□□ -1.38
MSH6-209ENST00000538136 CYB5AP00167 134 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 LYNP07948 512 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 HTR1AP08908 422 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 IRF2P14316 349 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 CRABP1P29762 137 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 SOX18P35713 384 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 MTNR1AP48039 350 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 FOXO1Q12778 655 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 HLXQ14774 488 aaPredicted RBP6.4□□□□□ -1.38
MSH6-209ENST00000538136 ZNF141Q15928 474 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 ZNF239Q16600 458 aaKnown RBP6.4□□□□□ -1.38
MSH6-209ENST00000538136 ARMC4Q5T2S8 1044 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 TMEM108Q6UXF1 575 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 MOB3CQ70IA8 216 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 BHLHA15Q7RTS1 189 aaPredicted RBP6.4□□□□□ -1.38
MSH6-209ENST00000538136 IL17RDQ8NFM7 739 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 OR13C9Q8NGT0 318 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 PDCD1LG2Q9BQ51 273 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 ZNF416Q9BWM5 594 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 C6orf62Q9GZU0 229 aaPredicted RBP6.4□□□□□ -1.38
MSH6-209ENST00000538136 Q9UFV3 132 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 RCE1Q9Y256 329 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 TSC22D4Q9Y3Q8 395 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 FLNAP21333 2647 aaKnown RBP6.4□□□□□ -1.38
MSH6-209ENST00000538136 MT-ND5P03915 603 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 CELA3BP08861 270 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 CTSSP25774 331 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 CHRNB4P30926 498 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 RIDAP52758 137 aaKnown RBP6.4□□□□□ -1.38
MSH6-209ENST00000538136 LTBQ06643 244 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 TSPAN31Q12999 210 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 RBM39Q14498 530 aaKnown RBP6.4□□□□□ -1.38
MSH6-209ENST00000538136 PDK3Q15120 406 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 TBRG1Q3YBR2 411 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 FNDC7Q5VTL7 733 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 KCTD18Q6PI47 426 aaPredicted RBP6.4□□□□□ -1.38
MSH6-209ENST00000538136 SSC4DQ8WTU2 575 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 STON2Q8WXE9 905 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 WDYHV1Q96HA8 205 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 GORASP2Q9H8Y8 452 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 FKRPQ9H9S5 495 aa6.4□□□□□ -1.38
MSH6-209ENST00000538136 CHMP1AQ9HD42 196 aaPredicted RBP6.4□□□□□ -1.38
MSH6-209ENST00000538136 OR6C68A6NDL8 312 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 HSPB2A8KAH6 182 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 DCTN6O00399 190 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 SYT5O00445 386 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 SYT7O43581 403 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 CSTBP04080 98 aaKnown RBP6.4□□□□□ -1.39
MSH6-209ENST00000538136 HRGP04196 525 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 NR2C1P13056 603 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 ALDH3B1P43353 468 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 ALDH3A2P51648 485 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 ERVS71-1P61550 626 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 PPP3R1P63098 170 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 IGLV3-21P80748 117 aaPredicted RBP6.4□□□□□ -1.39
MSH6-209ENST00000538136 IKZF1Q13422 519 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 HSPB2Q16082 182 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 SWT1Q5T5J6 900 aaKnown RBP6.4□□□□□ -1.39
MSH6-209ENST00000538136 GPR107Q5VW38 600 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 TMEM53Q6P2H8 277 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 TMPRSS11AQ6ZMR5 421 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 BEND4Q6ZU67 534 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 TRAPPC6BQ86SZ2 158 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 NAA40Q86UY6 237 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 CLVS1Q8IUQ0 354 aaPredicted RBP6.4□□□□□ -1.39
MSH6-209ENST00000538136 CHDHQ8NE62 594 aaPredicted RBP6.4□□□□□ -1.39
MSH6-209ENST00000538136 POC1BQ8TC44 478 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 CD300AQ9UGN4 299 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 ING4Q9UNL4 249 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 AHRRA9YTQ3 701 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 ACOT8O14734 319 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 CD2P06729 351 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 ARFIP1P53367 373 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 TPTEP56180 551 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 EDDM3BP56851 147 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 DYNC1I2Q13409 638 aaKnown RBP6.4□□□□□ -1.39
MSH6-209ENST00000538136 SLC18B1Q6NT16 456 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 MDP1Q86V88 176 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 Q8NA96 180 aa6.4□□□□□ -1.39
MSH6-209ENST00000538136 UXS1Q8NBZ7 420 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms