RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 ESRP2Q9H6T0 727 aaKnown RBP10.51□□□□□ -0.73
CHD4-203ENST00000535717 POLE4Q9NR33 117 aa10.51□□□□□ -0.73
CHD4-203ENST00000535717 USE1Q9NZ43 259 aa10.51□□□□□ -0.73
CHD4-203ENST00000535717 CRNNQ9UBG3 495 aaPredicted RBP10.51□□□□□ -0.73
CHD4-203ENST00000535717 FKBP7Q9Y680 259 aa10.51□□□□□ -0.73
CHD4-203ENST00000535717 NOTCH2Q04721 2471 aa10.51□□□□□ -0.73
CHD4-203ENST00000535717 SPG11Q96JI7 2443 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 IGHV1-18A0A0C4DH31 117 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 FAM171A2A8MVW0 826 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 SURF4O15260 269 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 UBL3O95164 117 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 MPZL1O95297 269 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 PLAUP00749 431 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 IGKV3-15P01624 115 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 IGLV1-44P01699 117 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 HMGN1P05114 100 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 CELA3BP08861 270 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 MMP7P09237 267 aaPredicted RBP10.5□□□□□ -0.73
CHD4-203ENST00000535717 MSR1P21757 451 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 CD40P25942 277 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 PYCR1P32322 319 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 ARR3P36575 388 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 POLR2IP36954 125 aaKnown RBP10.5□□□□□ -0.73
CHD4-203ENST00000535717 GUCA1AP43080 201 aaPredicted RBP10.5□□□□□ -0.73
CHD4-203ENST00000535717 ALDH3A2P51648 485 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 NR1H2P55055 460 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 RAB1AP62820 205 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 NPRL3Q12980 569 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 DYNC1I2Q13409 638 aaKnown RBP10.5□□□□□ -0.73
CHD4-203ENST00000535717 ENDOGQ14249 297 aaKnown RBP10.5□□□□□ -0.73
CHD4-203ENST00000535717 GSG1Q2KHT4 349 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 OTPQ5XKR4 325 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 DNM1P34Q6PK57 102 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 UGT2A3Q6UWM9 527 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 TMEM108Q6UXF1 575 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 SLC16A14Q7RTX9 510 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 MYPOPQ86VE0 399 aaPredicted RBP10.5□□□□□ -0.73
CHD4-203ENST00000535717 OR9Q1Q8NGQ5 310 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 ZNRF4Q8WWF5 429 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 NANOS1Q8WY41 292 aaKnown RBP10.5□□□□□ -0.73
CHD4-203ENST00000535717 FBXO17Q96EF6 278 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 ZNF75AQ96N20 296 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 SLC38A2Q96QD8 506 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 SLC29A1Q99808 456 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 TMEM204Q9BSN7 226 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 C9orf16Q9BUW7 83 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 GABARAPL3Q9BY60 117 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 RACGAP1Q9H0H5 632 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 CLEC4MQ9H2X3 399 aaPredicted RBP10.5□□□□□ -0.73
CHD4-203ENST00000535717 MED20Q9H944 212 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 MOV10Q9HCE1 1003 aaKnown RBP10.5□□□□□ -0.73
CHD4-203ENST00000535717 EMC7Q9NPA0 242 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 ENOPH1Q9UHY7 261 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 LRRC42Q9Y546 428 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 CACNA1DQ01668 2161 aa10.5□□□□□ -0.73
CHD4-203ENST00000535717 PDZD2O15018 2839 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 AKAP6Q13023 2319 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 FAM183AA6NL82 134 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 ZAR1LA6NP61 321 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 ABCD4O14678 606 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 CD3EP07766 207 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 CST2P09228 141 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 CECR9P0C854 216 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 GAAP10253 952 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 CLUP10909 449 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 ZNF3P17036 446 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 PTAFRP25105 342 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 PTDSS1P48651 473 aaKnown RBP10.49□□□□□ -0.73
CHD4-203ENST00000535717 CENPAP49450 140 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 IDH3GP51553 393 aaPredicted RBP10.49□□□□□ -0.73
CHD4-203ENST00000535717 SLC25A1P53007 311 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 SPOCK1Q08629 439 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 KCNMB1Q16558 191 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 C3orf36Q3SXR2 165 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 SLC36A2Q495M3 483 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 SLX4IPQ5VYV7 408 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 ZBTB49Q6ZSB9 765 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 DPPA2Q7Z7J5 298 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 CDC20BQ86Y33 519 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 SLC26A10Q8NG04 563 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 OR2T4Q8NH00 348 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 C11orf40Q8WZ69 217 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 PTP4A1Q93096 173 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 EME1Q96AY2 570 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 MS4A3Q96HJ5 214 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 ZNF416Q9BWM5 594 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 HCAR1Q9BXC0 346 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 RIBC2Q9H4K1 309 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 TVP23BQ9NYZ1 205 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 RNF115Q9Y4L5 304 aa10.49□□□□□ -0.73
CHD4-203ENST00000535717 TEX15Q9BXT5 2789 aa10.48□□□□□ -0.73
CHD4-203ENST00000535717 C12orf71A8MTZ7 269 aa10.48□□□□□ -0.73
CHD4-203ENST00000535717 RAB36O95755 333 aa10.48□□□□□ -0.73
CHD4-203ENST00000535717 TFP02787 698 aa10.48□□□□□ -0.73
CHD4-203ENST00000535717 GYPBP06028 91 aa10.48□□□□□ -0.73
CHD4-203ENST00000535717 ZNF14P17017 642 aaPredicted RBP10.48□□□□□ -0.73
CHD4-203ENST00000535717 ZNF32P17041 273 aa10.48□□□□□ -0.73
CHD4-203ENST00000535717 SPI1P17947 270 aa10.48□□□□□ -0.73
CHD4-203ENST00000535717 HSF2Q03933 536 aa10.48□□□□□ -0.73
CHD4-203ENST00000535717 GLO1Q04760 184 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms