RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 GUCA1AP43080 201 aaPredicted RBP7.54□□□□□ -1.2
COPB1-210ENST00000533533 MAGEA2P43356 314 aa7.54□□□□□ -1.2
COPB1-210ENST00000533533 LIMS1P48059 325 aa7.54□□□□□ -1.2
COPB1-210ENST00000533533 CENPAP49450 140 aa7.54□□□□□ -1.2
COPB1-210ENST00000533533 IDH3GP51553 393 aaPredicted RBP7.54□□□□□ -1.2
COPB1-210ENST00000533533 RAP1BP61224 184 aa7.54□□□□□ -1.2
COPB1-210ENST00000533533 RAP1AP62834 184 aa7.54□□□□□ -1.2
COPB1-210ENST00000533533 FMODQ06828 376 aa7.54□□□□□ -1.2
COPB1-210ENST00000533533 SGCAQ16586 387 aa7.54□□□□□ -1.2
COPB1-210ENST00000533533 ARMC4Q5T2S8 1044 aa7.54□□□□□ -1.2
COPB1-210ENST00000533533 LIPNQ5VXI9 398 aa7.54□□□□□ -1.2
COPB1-210ENST00000533533 PGBD2Q6P3X8 592 aa7.54□□□□□ -1.2
COPB1-210ENST00000533533 SMARCD3Q6STE5 483 aa7.54□□□□□ -1.2
COPB1-210ENST00000533533 CLDN22Q8N7P3 220 aa7.54□□□□□ -1.2
COPB1-210ENST00000533533 LRRC75AQ8NAA5 344 aa7.54□□□□□ -1.2
COPB1-210ENST00000533533 AQP11Q8NBQ7 271 aa7.54□□□□□ -1.2
COPB1-210ENST00000533533 HDAC2Q92769 488 aaKnown RBP7.54□□□□□ -1.2
COPB1-210ENST00000533533 RASD2Q96D21 266 aa7.54□□□□□ -1.2
COPB1-210ENST00000533533 FBXO17Q96EF6 278 aa7.54□□□□□ -1.2
COPB1-210ENST00000533533 Q96M85 177 aa7.54□□□□□ -1.2
COPB1-210ENST00000533533 FOXN4Q96NZ1 517 aa7.54□□□□□ -1.2
COPB1-210ENST00000533533 SORCS2Q96PQ0 1159 aa7.54□□□□□ -1.2
COPB1-210ENST00000533533 GPA33Q99795 319 aa7.54□□□□□ -1.2
COPB1-210ENST00000533533 IFT27Q9BW83 186 aa7.54□□□□□ -1.2
COPB1-210ENST00000533533 LRMDAQ9H2I8 198 aa7.54□□□□□ -1.2
COPB1-210ENST00000533533 RNF121Q9H920 327 aa7.54□□□□□ -1.2
COPB1-210ENST00000533533 SEC61A2Q9H9S3 476 aa7.54□□□□□ -1.2
COPB1-210ENST00000533533 OBP2BQ9NPH6 170 aa7.54□□□□□ -1.2
COPB1-210ENST00000533533 VNN3Q9NY84 501 aa7.54□□□□□ -1.2
COPB1-210ENST00000533533 MOKQ9UQ07 419 aa7.54□□□□□ -1.2
COPB1-210ENST00000533533 SIGLEC7Q9Y286 467 aa7.54□□□□□ -1.2
COPB1-210ENST00000533533 IER3IP1Q9Y5U9 82 aa7.54□□□□□ -1.2
COPB1-210ENST00000533533 PKD1L1Q8TDX9 2849 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 TEX13CA0A0J9YWL9 993 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 A0A1W2PPL8 197 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 FKBP6O75344 327 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 PTP4A3O75365 173 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 TIPRLO75663 272 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 RAB36O95755 333 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 IGHMP01871 453 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 TSPAN19P0C672 248 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 PATE4P0C8F1 98 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 OR8G3PP0DMU2 310 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 ZNF23P17027 643 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 FPR3P25089 353 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 NOS3P29474 1203 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 SLC6A6P31641 620 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 CDAP32320 146 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 PTDSS1P48651 473 aaKnown RBP7.53□□□□□ -1.2
COPB1-210ENST00000533533 RPS6KA3P51812 740 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 SNRPD2P62316 118 aaKnown RBP7.53□□□□□ -1.2
COPB1-210ENST00000533533 TSPAN31Q12999 210 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 KRR1Q13601 381 aaKnown RBP7.53□□□□□ -1.2
COPB1-210ENST00000533533 FHL1Q13642 323 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 CARTPTQ16568 116 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 CLEC12AQ5QGZ9 265 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 FAM205BPQ63HN1 556 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 LRFN4Q6PJG9 635 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 MDP1Q86V88 176 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 JAZF1Q86VZ6 243 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 LRRC18Q8N456 261 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 SLC22A24Q8N4F4 322 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 LINC00471Q8N535 108 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 ZNF540Q8NDQ6 660 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 OR10G2Q8NGC3 310 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 OR52L1Q8NGH7 329 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 MAGEE2Q8TD90 523 aaPredicted RBP7.53□□□□□ -1.2
COPB1-210ENST00000533533 SAMD8Q96LT4 415 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 ERMAPQ96PL5 475 aaPredicted RBP7.53□□□□□ -1.2
COPB1-210ENST00000533533 SLC38A2Q96QD8 506 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 SH3GL3Q99963 347 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 FUZQ9BT04 418 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 ALG12Q9BV10 488 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 MRPL13Q9BYD1 178 aaKnown RBP7.53□□□□□ -1.2
COPB1-210ENST00000533533 KCNN2Q9H2S1 579 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 OR52D1Q9H346 318 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 MMADHCQ9H3L0 296 aaPredicted RBP7.53□□□□□ -1.2
COPB1-210ENST00000533533 NELFAQ9H3P2 528 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 DENND2DQ9H6A0 471 aaPredicted RBP7.53□□□□□ -1.2
COPB1-210ENST00000533533 MYOZ1Q9NP98 299 aaPredicted RBP7.53□□□□□ -1.2
COPB1-210ENST00000533533 TMEM38BQ9NVV0 291 aa7.53□□□□□ -1.2
COPB1-210ENST00000533533 ARPC4-TTLL3A0A0A6YYG9 625 aa7.52□□□□□ -1.21
COPB1-210ENST00000533533 IGHV1-18A0A0C4DH31 117 aa7.52□□□□□ -1.21
COPB1-210ENST00000533533 TCRBV3S1A0A5B6 114 aa7.52□□□□□ -1.21
COPB1-210ENST00000533533 NPIPB13A6NJU9 1138 aa7.52□□□□□ -1.21
COPB1-210ENST00000533533 CENPBD1B2RD01 187 aa7.52□□□□□ -1.21
COPB1-210ENST00000533533 NPIPB4C9JG80 1138 aa7.52□□□□□ -1.21
COPB1-210ENST00000533533 ENTPD5O75356 428 aa7.52□□□□□ -1.21
COPB1-210ENST00000533533 UBL3O95164 117 aa7.52□□□□□ -1.21
COPB1-210ENST00000533533 SOX14O95416 240 aa7.52□□□□□ -1.21
COPB1-210ENST00000533533 GASTP01350 101 aa7.52□□□□□ -1.21
COPB1-210ENST00000533533 CRYAAP02489 173 aa7.52□□□□□ -1.21
COPB1-210ENST00000533533 CELA3BP08861 270 aa7.52□□□□□ -1.21
COPB1-210ENST00000533533 CBR1P16152 277 aa7.52□□□□□ -1.21
COPB1-210ENST00000533533 ZNF26P17031 533 aaPredicted RBP7.52□□□□□ -1.21
COPB1-210ENST00000533533 HOXB6P17509 224 aaKnown RBP7.52□□□□□ -1.21
COPB1-210ENST00000533533 SDHAP31040 664 aa7.52□□□□□ -1.21
COPB1-210ENST00000533533 SERPINF1P36955 418 aa7.52□□□□□ -1.21
COPB1-210ENST00000533533 GIPRP48546 466 aa7.52□□□□□ -1.21
COPB1-210ENST00000533533 GSSP48637 474 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms