RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 LAP3P28838 519 aa17.67■□□□□ 0.42
CCS-208ENST00000533244 ENDOGQ14249 297 aaKnown RBP17.67■□□□□ 0.42
CCS-208ENST00000533244 EFNB3Q15768 340 aa17.67■□□□□ 0.42
CCS-208ENST00000533244 IFT27Q9BW83 186 aa17.67■□□□□ 0.42
CCS-208ENST00000533244 CACNG6Q9BXT2 260 aa17.67■□□□□ 0.42
CCS-208ENST00000533244 KCNN2Q9H2S1 579 aa17.67■□□□□ 0.42
CCS-208ENST00000533244 RNF121Q9H920 327 aa17.67■□□□□ 0.42
CCS-208ENST00000533244 ARFGEF3Q5TH69 2177 aa17.67■□□□□ 0.42
CCS-208ENST00000533244 A0A1W2PPL8 197 aa17.66■□□□□ 0.42
CCS-208ENST00000533244 BHLHE40O14503 412 aa17.66■□□□□ 0.42
CCS-208ENST00000533244 IGHV4-39P01824 125 aa17.66■□□□□ 0.42
CCS-208ENST00000533244 THBS4P35443 961 aa17.66■□□□□ 0.42
CCS-208ENST00000533244 SERPINF1P36955 418 aa17.66■□□□□ 0.42
CCS-208ENST00000533244 SNTB2Q13425 540 aaKnown RBP17.66■□□□□ 0.42
CCS-208ENST00000533244 DAG1Q14118 895 aa17.66■□□□□ 0.42
CCS-208ENST00000533244 CD300LDQ6UXZ3 194 aa17.66■□□□□ 0.42
CCS-208ENST00000533244 TMEM179BQ7Z7N9 219 aa17.66■□□□□ 0.42
CCS-208ENST00000533244 SLC30A7Q8NEW0 376 aa17.66■□□□□ 0.42
CCS-208ENST00000533244 OR10G2Q8NGC3 310 aa17.66■□□□□ 0.42
CCS-208ENST00000533244 OR8D4Q8NGM9 314 aa17.66■□□□□ 0.42
CCS-208ENST00000533244 PLA2G12AQ9BZM1 189 aa17.66■□□□□ 0.42
CCS-208ENST00000533244 NUAK2Q9H093 628 aa17.66■□□□□ 0.42
CCS-208ENST00000533244 YY1AP1Q9H869 796 aa17.66■□□□□ 0.42
CCS-208ENST00000533244 SLC16A7O60669 478 aa17.65■□□□□ 0.42
CCS-208ENST00000533244 NDUFS7O75251 213 aa17.65■□□□□ 0.42
CCS-208ENST00000533244 KHDRBS3O75525 346 aaKnown RBP17.65■□□□□ 0.42
CCS-208ENST00000533244 SNAP29O95721 258 aa17.65■□□□□ 0.42
CCS-208ENST00000533244 PTHP01270 115 aa17.65■□□□□ 0.42
CCS-208ENST00000533244 TP53P04637 393 aaPredicted RBP17.65■□□□□ 0.42
CCS-208ENST00000533244 OR4A8P0C604 315 aa17.65■□□□□ 0.42
CCS-208ENST00000533244 HIST1H1CP16403 213 aaKnown RBP17.65■□□□□ 0.42
CCS-208ENST00000533244 GSTM3P21266 225 aa17.65■□□□□ 0.42
CCS-208ENST00000533244 GUCA1AP43080 201 aaPredicted RBP17.65■□□□□ 0.42
CCS-208ENST00000533244 CBX1P83916 185 aa17.65■□□□□ 0.42
CCS-208ENST00000533244 PABPC1L2AQ5JQF8 200 aa17.65■□□□□ 0.42
CCS-208ENST00000533244 KRT80Q6KB66 452 aa17.65■□□□□ 0.42
CCS-208ENST00000533244 ASRGL1Q7L266 308 aa17.65■□□□□ 0.42
CCS-208ENST00000533244 SYT9Q86SS6 491 aa17.65■□□□□ 0.42
CCS-208ENST00000533244 CPEB3Q8NE35 698 aaKnown RBP17.65■□□□□ 0.42
CCS-208ENST00000533244 WACQ9BTA9 647 aa17.65■□□□□ 0.42
CCS-208ENST00000533244 ZNF416Q9BWM5 594 aa17.65■□□□□ 0.42
CCS-208ENST00000533244 CCNB1IP1Q9NPC3 277 aa17.65■□□□□ 0.42
CCS-208ENST00000533244 IGLV1-36A0A0B4J1U3 117 aa17.64■□□□□ 0.42
CCS-208ENST00000533244 IQCMA0A1B0GVH7 501 aa17.64■□□□□ 0.42
CCS-208ENST00000533244 B9A039 149 aa17.64■□□□□ 0.42
CCS-208ENST00000533244 DCTN6O00399 190 aa17.64■□□□□ 0.42
CCS-208ENST00000533244 CD99P14209 185 aa17.64■□□□□ 0.42
CCS-208ENST00000533244 GLRXP35754 106 aa17.64■□□□□ 0.42
CCS-208ENST00000533244 PSG4Q00888 419 aa17.64■□□□□ 0.42
CCS-208ENST00000533244 PLP2Q04941 152 aa17.64■□□□□ 0.42
CCS-208ENST00000533244 VHLLQ6RSH7 139 aa17.64■□□□□ 0.42
CCS-208ENST00000533244 UGT2A3Q6UWM9 527 aa17.64■□□□□ 0.42
CCS-208ENST00000533244 PAQR4Q8N4S7 273 aaPredicted RBP17.64■□□□□ 0.42
CCS-208ENST00000533244 OR52L1Q8NGH7 329 aa17.64■□□□□ 0.42
CCS-208ENST00000533244 GIPC3Q8TF64 312 aa17.64■□□□□ 0.42
CCS-208ENST00000533244 NMNAT3Q96T66 252 aa17.64■□□□□ 0.42
CCS-208ENST00000533244 NIPSNAP1Q9BPW8 284 aa17.64■□□□□ 0.42
CCS-208ENST00000533244 OR2H1Q9GZK4 316 aa17.64■□□□□ 0.42
CCS-208ENST00000533244 WNT5BQ9H1J7 359 aa17.64■□□□□ 0.42
CCS-208ENST00000533244 PLK3Q9H4B4 646 aa17.64■□□□□ 0.42
CCS-208ENST00000533244 DNAJB9Q9UBS3 223 aa17.64■□□□□ 0.42
CCS-208ENST00000533244 GDF2Q9UK05 429 aaPredicted RBP17.64■□□□□ 0.42
CCS-208ENST00000533244 COA3Q9Y2R0 106 aaPredicted RBP17.64■□□□□ 0.42
CCS-208ENST00000533244 SPEF1Q9Y4P9 236 aa17.64■□□□□ 0.42
CCS-208ENST00000533244 RTTNQ86VV8 2226 aa17.64■□□□□ 0.41
CCS-208ENST00000533244 GPRIN2O60269 458 aa17.64■□□□□ 0.41
CCS-208ENST00000533244 CRABP1P29762 137 aa17.64■□□□□ 0.41
CCS-208ENST00000533244 ERFP50548 548 aa17.64■□□□□ 0.41
CCS-208ENST00000533244 PCBD1P61457 104 aa17.64■□□□□ 0.41
CCS-208ENST00000533244 HSF2Q03933 536 aa17.64■□□□□ 0.41
CCS-208ENST00000533244 KCNMB1Q16558 191 aa17.64■□□□□ 0.41
CCS-208ENST00000533244 MSMPQ1L6U9 139 aa17.64■□□□□ 0.41
CCS-208ENST00000533244 CLEC12AQ5QGZ9 265 aa17.64■□□□□ 0.41
CCS-208ENST00000533244 LEG1Q6P5S2 330 aa17.64■□□□□ 0.41
CCS-208ENST00000533244 DNM1P46Q6ZS02 220 aa17.64■□□□□ 0.41
CCS-208ENST00000533244 JAZF1Q86VZ6 243 aa17.64■□□□□ 0.41
CCS-208ENST00000533244 GLB1L2Q8IW92 636 aa17.64■□□□□ 0.41
CCS-208ENST00000533244 OR4K13Q8NH42 304 aa17.64■□□□□ 0.41
CCS-208ENST00000533244 Q96MF0 132 aa17.64■□□□□ 0.41
CCS-208ENST00000533244 TSSK2Q96PF2 358 aa17.64■□□□□ 0.41
CCS-208ENST00000533244 DDOQ99489 341 aa17.64■□□□□ 0.41
CCS-208ENST00000533244 FEVQ99581 238 aa17.64■□□□□ 0.41
CCS-208ENST00000533244 RACGAP1Q9H0H5 632 aa17.64■□□□□ 0.41
CCS-208ENST00000533244 BARX1Q9HBU1 254 aaPredicted RBP17.64■□□□□ 0.41
CCS-208ENST00000533244 EMC7Q9NPA0 242 aa17.64■□□□□ 0.41
CCS-208ENST00000533244 TIMM10BQ9Y5J6 103 aa17.64■□□□□ 0.41
CCS-208ENST00000533244 TMEM129A0AVI4 362 aa17.63■□□□□ 0.41
CCS-208ENST00000533244 C12orf71A8MTZ7 269 aa17.63■□□□□ 0.41
CCS-208ENST00000533244 IGFBP1P08833 259 aaPredicted RBP17.63■□□□□ 0.41
CCS-208ENST00000533244 GAAP10253 952 aa17.63■□□□□ 0.41
CCS-208ENST00000533244 BMP4P12644 408 aa17.63■□□□□ 0.41
CCS-208ENST00000533244 CCL2P13500 99 aa17.63■□□□□ 0.41
CCS-208ENST00000533244 APEX1P27695 318 aaKnown RBP17.63■□□□□ 0.41
CCS-208ENST00000533244 NOS3P29474 1203 aa17.63■□□□□ 0.41
CCS-208ENST00000533244 LSM6P62312 80 aaKnown RBP17.63■□□□□ 0.41
CCS-208ENST00000533244 GALK2Q01415 458 aa17.63■□□□□ 0.41
CCS-208ENST00000533244 COX10Q12887 443 aa17.63■□□□□ 0.41
CCS-208ENST00000533244 TBC1D28Q2M2D7 210 aa17.63■□□□□ 0.41
CCS-208ENST00000533244 ZNF362Q5T0B9 420 aaPredicted RBP17.63■□□□□ 0.41
CCS-208ENST00000533244 DNM1P34Q6PK57 102 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms