RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 SRA1Q9HD15 236 aaKnown RBP6.98□□□□□ -1.29
SSBP3-211ENST00000528787 FBXO9Q9UK97 447 aaPredicted RBP6.98□□□□□ -1.29
SSBP3-211ENST00000528787 B9D1Q9UPM9 204 aa6.98□□□□□ -1.29
SSBP3-211ENST00000528787 TIMM10BQ9Y5J6 103 aa6.98□□□□□ -1.29
SSBP3-211ENST00000528787 CACNA1CQ13936 2221 aa6.98□□□□□ -1.29
SSBP3-211ENST00000528787 FREM1Q5H8C1 2179 aa6.98□□□□□ -1.29
SSBP3-211ENST00000528787 MYO18BQ8IUG5 2567 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 OR6C68A6NDL8 312 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 EFCAB10A6NFE3 127 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 J3QW42 95 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 ZNHIT1O43257 154 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 RAD51DO75771 328 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 COX5BP10606 129 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 EPXP11678 715 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 SPI1P17947 270 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 IGHV1-2P23083 117 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 PTAFRP25105 342 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 KIR2DL3P43628 341 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 MTNR1AP48039 350 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 ENTPD1P49961 510 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 ADAM8P78325 824 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 ARF1P84077 181 aaKnown RBP6.97□□□□□ -1.29
SSBP3-211ENST00000528787 MRPL28Q13084 256 aaKnown RBP6.97□□□□□ -1.29
SSBP3-211ENST00000528787 GGTLC2Q14390 218 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 PPA1Q15181 289 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 GABRA6Q16445 453 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 FBXW10Q5XX13 1052 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 SLC18B1Q6NT16 456 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 LRFN4Q6PJG9 635 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 DEGS2Q6QHC5 323 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 ZNF474Q6S9Z5 364 aaPredicted RBP6.97□□□□□ -1.29
SSBP3-211ENST00000528787 TMEM108Q6UXF1 575 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 STAC2Q6ZMT1 411 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 KCTD20Q7Z5Y7 419 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 OR6V1Q8N148 313 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 IQCF1Q8N6M8 205 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 RELL2Q8NC24 303 aaPredicted RBP6.97□□□□□ -1.29
SSBP3-211ENST00000528787 RHOXF1Q8NHV9 184 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 NSMAFQ92636 917 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 SPTSSAQ969W0 71 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 DCLRE1CQ96SD1 692 aaKnown RBP6.97□□□□□ -1.29
SSBP3-211ENST00000528787 MBOAT4Q96T53 435 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 TEAD3Q99594 435 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 SPOCK3Q9BQ16 436 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 NMNAT2Q9BZQ4 307 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 ACTR6Q9GZN1 396 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 HDHD2Q9H0R4 259 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 OR51V1Q9H2C8 321 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 POLE4Q9NR33 117 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 CNOT2Q9NZN8 540 aaKnown RBP6.97□□□□□ -1.29
SSBP3-211ENST00000528787 KCNN3Q9UGI6 736 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 PRSS50Q9UI38 385 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 TPRKBQ9Y3C4 175 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 CFAP46Q8IYW2 2715 aa6.97□□□□□ -1.29
SSBP3-211ENST00000528787 HCFC1P51610 2035 aa6.96□□□□□ -1.29
SSBP3-211ENST00000528787 IGLV1-36A0A0B4J1U3 117 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 OR6C6A6NF89 314 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 DENRO43583 198 aaKnown RBP6.96□□□□□ -1.3
SSBP3-211ENST00000528787 MRPS14O60783 128 aaKnown RBP6.96□□□□□ -1.3
SSBP3-211ENST00000528787 ZNF254O75437 659 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 LYZL6O75951 148 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 SLC2A10O95528 541 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 IGHV3-9P01782 118 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 CRYAAP02489 173 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 ITGA5P08648 1049 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 TACSTD2P09758 323 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 OR2T7P0C7T2 308 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 CD79AP11912 226 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 B4GALT1P15291 398 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 CBR1P16152 277 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 CTLA4P16410 223 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 MYL12AP19105 171 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 KLK2P20151 261 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 MYF6P23409 242 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 DCKP27707 260 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 APLNRP35414 380 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 RGS6P49758 472 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 AQP4P55087 323 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 RPS23P62266 143 aaKnown RBP6.96□□□□□ -1.3
SSBP3-211ENST00000528787 ACTA2P62736 377 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 GRB2P62993 217 aaKnown RBP6.96□□□□□ -1.3
SSBP3-211ENST00000528787 ACTG2P63267 376 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 ADARB1P78563 741 aaKnown RBP6.96□□□□□ -1.3
SSBP3-211ENST00000528787 EFNB1P98172 346 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 GALK2Q01415 458 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 APOFQ13790 326 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 MAD2L1BPQ15013 274 aaPredicted RBP6.96□□□□□ -1.3
SSBP3-211ENST00000528787 TAF13Q15543 124 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 TBC1D28Q2M2D7 210 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 TBRG1Q3YBR2 411 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 BEX5Q5H9J7 111 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 RBM48Q5RL73 367 aaKnown RBP6.96□□□□□ -1.3
SSBP3-211ENST00000528787 TMEM236Q5W0B7 351 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 SLC16A9Q7RTY1 509 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.96□□□□□ -1.3
SSBP3-211ENST00000528787 CYB561A3Q8NBI2 242 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 SLC26A10Q8NG04 563 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 OR2T27Q8NH04 317 aa6.96□□□□□ -1.3
SSBP3-211ENST00000528787 BCL2L2Q92843 193 aaPredicted RBP6.96□□□□□ -1.3
SSBP3-211ENST00000528787 MYDGFQ969H8 173 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms