RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 CALHM3Q86XJ0 350 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 KRTCAP2Q8N6L1 136 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 ZIC4Q8N9L1 334 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 DEFB108BQ8NET1 73 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 OR4F15Q8NGB8 312 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 OR1K1Q8NGR3 316 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 FAM110DQ8TAY7 271 aaPredicted RBP5.6□□□□□ -1.51
SDCBP-210ENST00000522843 NRG4Q8WWG1 115 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 BCL2L2Q92843 193 aaPredicted RBP5.6□□□□□ -1.51
SDCBP-210ENST00000522843 SLC25A28Q96A46 364 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 VPS33AQ96AX1 596 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 ASB9Q96DX5 294 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 C16orf58Q96GQ5 468 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 ITCHQ96J02 903 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 ANKRD27Q96NW4 1050 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 OR52E6Q96RD3 313 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 CGREF1Q99674 301 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 PAIP1Q9H074 479 aaKnown RBP5.6□□□□□ -1.51
SDCBP-210ENST00000522843 DCLRE1BQ9H816 532 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 GIMAP4Q9NUV9 329 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 ATAD3AQ9NVI7 634 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 CMTM6Q9NX76 183 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 GIN1Q9NXP7 522 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 RNF7Q9UBF6 113 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 POMPQ9Y244 141 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 LRCH1Q9Y2L9 728 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 POLR3HQ9Y535 204 aaPredicted RBP5.6□□□□□ -1.51
SDCBP-210ENST00000522843 FLVCR1Q9Y5Y0 555 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 PLXNB1O43157 2135 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 TENM2Q9NT68 2774 aa5.6□□□□□ -1.51
SDCBP-210ENST00000522843 ARPC4-TTLL3A0A0A6YYG9 625 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 MDFIC2A0A1B0GVS7 189 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 PRORSD1PA6NEY8 169 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 OR6C65A6NJZ3 312 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 TTC36A6NLP5 189 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 AQP12BA6NM10 295 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 NPIPB9F8W1W9 429 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 H0YHG0 523 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 GPR171O14626 319 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 TIMM23O14925 209 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 FKBP6O75344 327 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 RBMXL2O75526 392 aaKnown RBP5.59□□□□□ -1.51
SDCBP-210ENST00000522843 NUDT14O95848 222 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 IGHV2-5P01817 119 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 LAMP1P11279 417 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 HOXB6P17509 224 aaKnown RBP5.59□□□□□ -1.51
SDCBP-210ENST00000522843 PPIBP23284 216 aaKnown RBP5.59□□□□□ -1.51
SDCBP-210ENST00000522843 PEX2P28328 305 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 RAG2P55895 527 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 NME5P56597 212 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 H3F3AP84243 136 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 MS4A2Q01362 244 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 C2orf80Q0P641 193 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 BNIP2Q12982 314 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 SLC17A1Q14916 467 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 C3orf36Q3SXR2 165 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 SYT14P1Q58G82 188 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 SAXO2Q658L1 398 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 OLFML2AQ68BL7 652 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 C16orf87Q6PH81 154 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 CCBE1Q6UXH8 406 aaPredicted RBP5.59□□□□□ -1.51
SDCBP-210ENST00000522843 C17orf107Q6ZR85 190 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 AQP12AQ8IXF9 295 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 MSRB3Q8IXL7 192 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 PIGXQ8TBF5 258 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 MARS2Q96GW9 593 aaKnown RBP5.59□□□□□ -1.51
SDCBP-210ENST00000522843 ZNF583Q96ND8 569 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 TSSK3Q96PN8 268 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 KCNS3Q9BQ31 491 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 DUSP26Q9BV47 211 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 KAT8Q9H7Z6 458 aaKnown RBP5.59□□□□□ -1.51
SDCBP-210ENST00000522843 GORASP2Q9H8Y8 452 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 NOX3Q9HBY0 568 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 HHATLQ9HCP6 504 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 OBP2BQ9NPH6 170 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 MMP26Q9NRE1 261 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 PLEK2Q9NYT0 353 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 SLC25A37Q9NYZ2 338 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 VAPAQ9P0L0 249 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 ACTR3BQ9P1U1 418 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 UPB1Q9UBR1 384 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 PRDM4Q9UKN5 801 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 NUP50Q9UKX7 468 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 PCLOQ9Y6V0 5065 aa5.59□□□□□ -1.51
SDCBP-210ENST00000522843 GNG14A0A1W2PPG7 69 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 TCRBV3S1A0A5B6 114 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 NME4O00746 187 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 RFXANKO14593 260 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 SYNGR3O43761 229 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 BCAS1O75363 584 aaPredicted RBP5.58□□□□□ -1.52
SDCBP-210ENST00000522843 CIB2O75838 187 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 ZFPL1O95159 310 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 ATP6V1G2O95670 118 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 PMS2P2O95744 297 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 GPANK1O95872 356 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 UMPSP11172 480 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 ANPEPP15144 967 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 HPGDP15428 266 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 LCN1P31025 176 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 HPCAL1P37235 193 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms