RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 MT-CO3P00414 261 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 EPHA8P29322 1005 aaPredicted RBP14.81□□□□□ -0.04
USP42-207ENST00000521713 CAV3P56539 151 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 SEC61A1P61619 476 aaKnown RBP14.81□□□□□ -0.04
USP42-207ENST00000521713 LCN6P62502 163 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 SRPXP78539 464 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 TFF2Q03403 129 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 SPEM2Q0P670 501 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 MAML2Q8IZL2 1156 aaPredicted RBP14.81□□□□□ -0.04
USP42-207ENST00000521713 LGALS14Q8TCE9 139 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 GPBAR1Q8TDU6 330 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 NIPSNAP3BQ9BS92 247 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 SEMA4CQ9C0C4 833 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 RHBDD3Q9Y3P4 386 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 AIPO00170 330 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 NCR1O76036 304 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 RPS19P39019 145 aaKnown RBP14.81□□□□□ -0.04
USP42-207ENST00000521713 GABREP78334 506 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 DTWD2Q8NBA8 298 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 OR1N1Q8NGS0 311 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 METTL9Q9H1A3 318 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 NDRG3Q9UGV2 375 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 C2orf72A6NCS6 295 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 CD300LBA8K4G0 201 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 CNOT4O95628 575 aaKnown RBP14.8□□□□□ -0.04
USP42-207ENST00000521713 COL9A1P20849 921 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 SIGIRRQ6IA17 410 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 GJC3Q8NFK1 279 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 OR1M1Q8NGA1 313 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 TTC9Q92623 222 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 SLAMF9Q96A28 289 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 CSF3RQ99062 836 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 HINT2Q9BX68 163 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 BCL2L10Q9HD36 194 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 PUS1Q9Y606 427 aaKnown RBP eCLIP14.8□□□□□ -0.04
USP42-207ENST00000521713 A0A0B4J2A0 478 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 C4orf47A7E2U8 309 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 TIMM8AO60220 97 aaPredicted RBP14.8□□□□□ -0.04
USP42-207ENST00000521713 FBXO24O75426 580 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 SBK2P0C263 348 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 ECI1P42126 302 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 ERVK-16P61578 105 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 PDZK1IP1Q13113 114 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 RUNX2Q13950 521 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 BEX5Q5H9J7 111 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 Q6ZPB1 254 aaPredicted RBP14.8□□□□□ -0.04
USP42-207ENST00000521713 DPY19L4Q7Z388 723 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 NANOGP1Q8N7R0 232 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 OR10Z1Q8NGY1 313 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 SHPKQ9UHJ6 478 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 TIMM8BQ9Y5J9 83 aaPredicted RBP14.8□□□□□ -0.04
USP42-207ENST00000521713 PRAMEF27A3QJZ7 478 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 PRPH2P23942 346 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 OR52I1Q8NGK6 324 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 YIPF5Q969M3 257 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 TMEM43Q9BTV4 400 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 ST6GALNAC5Q9BVH7 336 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 NDRG4Q9ULP0 352 aaKnown RBP14.8□□□□□ -0.04
USP42-207ENST00000521713 NRG2O14511 850 aaPredicted RBP14.8□□□□□ -0.04
USP42-207ENST00000521713 DRD3P35462 400 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 GPR85P60893 370 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 SPOCK1Q08629 439 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 DEFB109BQ30KR1 87 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 UBQLN3Q9H347 655 aa14.8□□□□□ -0.04
USP42-207ENST00000521713 MYO10Q9HD67 2058 aa14.79□□□□□ -0.04
USP42-207ENST00000521713 C20orf202A1L168 122 aa14.79□□□□□ -0.04
USP42-207ENST00000521713 PMS2P1A4D2B8 440 aa14.79□□□□□ -0.04
USP42-207ENST00000521713 FXYD4P59646 89 aa14.79□□□□□ -0.04
USP42-207ENST00000521713 Q499Y3 187 aa14.79□□□□□ -0.04
USP42-207ENST00000521713 YRDCQ86U90 279 aaKnown RBP14.79□□□□□ -0.04
USP42-207ENST00000521713 CD163Q86VB7 1156 aa14.79□□□□□ -0.04
USP42-207ENST00000521713 RGS11O94810 467 aa14.79□□□□□ -0.04
USP42-207ENST00000521713 IL2RAP01589 272 aa14.79□□□□□ -0.04
USP42-207ENST00000521713 FOXC1Q12948 553 aa14.79□□□□□ -0.04
USP42-207ENST00000521713 SLC14A1Q13336 389 aa14.79□□□□□ -0.04
USP42-207ENST00000521713 ZNF266Q14584 549 aa14.79□□□□□ -0.04
USP42-207ENST00000521713 STEAP1BQ6NZ63 245 aa14.79□□□□□ -0.04
USP42-207ENST00000521713 OR52H1Q8NGJ2 320 aa14.79□□□□□ -0.04
USP42-207ENST00000521713 MIB2Q96AX9 1013 aa14.79□□□□□ -0.04
USP42-207ENST00000521713 OCSTAMPQ9BR26 566 aa14.79□□□□□ -0.04
USP42-207ENST00000521713 MYEF2Q9P2K5 600 aaKnown RBP14.79□□□□□ -0.04
USP42-207ENST00000521713 A0A087WZY1 265 aa14.79□□□□□ -0.04
USP42-207ENST00000521713 FAM199XQ6PEV8 388 aaPredicted RBP14.79□□□□□ -0.04
USP42-207ENST00000521713 VHLLQ6RSH7 139 aa14.79□□□□□ -0.04
USP42-207ENST00000521713 PLPP5Q8NEB5 264 aa14.79□□□□□ -0.04
USP42-207ENST00000521713 SMIM3Q9BZL3 60 aa14.79□□□□□ -0.04
USP42-207ENST00000521713 MEIS3P1A6NDR6 274 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 FIGNL2A6NMB9 653 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 SERPINA7P05543 415 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 P2RX3P56373 397 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 RPL27P61353 136 aaKnown RBP14.78□□□□□ -0.04
USP42-207ENST00000521713 TNK1Q13470 666 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 ZNF610Q8N9Z0 462 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 RSPRY1Q96DX4 576 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 ZNF831Q5JPB2 1677 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 FRG2CA6NGY1 282 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 GABARAPH6UMI1 98 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 STK17BO94768 372 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 CD53P19397 219 aa14.78□□□□□ -0.04
USP42-207ENST00000521713 CLDN20P56880 219 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms