RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 OR2T29Q8NH02 315 aa17.82■□□□□ 0.44
TRIM35-203ENST00000521253 SAMD8Q96LT4 415 aa17.82■□□□□ 0.44
TRIM35-203ENST00000521253 ERMAPQ96PL5 475 aaPredicted RBP17.82■□□□□ 0.44
TRIM35-203ENST00000521253 SYT4Q9H2B2 425 aa17.82■□□□□ 0.44
TRIM35-203ENST00000521253 C1orf198Q9H425 327 aa17.82■□□□□ 0.44
TRIM35-203ENST00000521253 PLK3Q9H4B4 646 aa17.82■□□□□ 0.44
TRIM35-203ENST00000521253 CCNB1IP1Q9NPC3 277 aa17.82■□□□□ 0.44
TRIM35-203ENST00000521253 POLE4Q9NR33 117 aa17.82■□□□□ 0.44
TRIM35-203ENST00000521253 VSX1Q9NZR4 365 aaPredicted RBP17.82■□□□□ 0.44
TRIM35-203ENST00000521253 NF1P21359 2839 aa17.82■□□□□ 0.44
TRIM35-203ENST00000521253 VSTM5A8MXK1 200 aa17.81■□□□□ 0.44
TRIM35-203ENST00000521253 SMAD7O15105 426 aaKnown RBP17.81■□□□□ 0.44
TRIM35-203ENST00000521253 DNAJC8O75937 253 aaPredicted RBP17.81■□□□□ 0.44
TRIM35-203ENST00000521253 CCNB2O95067 398 aa17.81■□□□□ 0.44
TRIM35-203ENST00000521253 SCG5P05408 212 aa17.81■□□□□ 0.44
TRIM35-203ENST00000521253 CST2P09228 141 aa17.81■□□□□ 0.44
TRIM35-203ENST00000521253 SLC6A6P31641 620 aa17.81■□□□□ 0.44
TRIM35-203ENST00000521253 CDKN2AP42771 156 aaKnown RBP17.81■□□□□ 0.44
TRIM35-203ENST00000521253 NUDT6P53370 316 aa17.81■□□□□ 0.44
TRIM35-203ENST00000521253 HSF2Q03933 536 aa17.81■□□□□ 0.44
TRIM35-203ENST00000521253 MSMPQ1L6U9 139 aa17.81■□□□□ 0.44
TRIM35-203ENST00000521253 ZNF620Q6ZNG0 422 aa17.81■□□□□ 0.44
TRIM35-203ENST00000521253 SVOPLQ8N434 492 aa17.81■□□□□ 0.44
TRIM35-203ENST00000521253 FOXN4Q96NZ1 517 aa17.81■□□□□ 0.44
TRIM35-203ENST00000521253 SMR3AQ99954 134 aa17.81■□□□□ 0.44
TRIM35-203ENST00000521253 CHID1Q9BWS9 393 aa17.81■□□□□ 0.44
TRIM35-203ENST00000521253 REEP1Q9H902 201 aa17.81■□□□□ 0.44
TRIM35-203ENST00000521253 SLC7A8Q9UHI5 535 aa17.81■□□□□ 0.44
TRIM35-203ENST00000521253 SAMHD1Q9Y3Z3 626 aaKnown RBP17.81■□□□□ 0.44
TRIM35-203ENST00000521253 U3KQV3 271 aa17.81■□□□□ 0.44
TRIM35-203ENST00000521253 ZFHX3Q15911 3703 aa17.81■□□□□ 0.44
TRIM35-203ENST00000521253 IQCMA0A1B0GVH7 501 aa17.8■□□□□ 0.44
TRIM35-203ENST00000521253 TMEM129A0AVI4 362 aa17.8■□□□□ 0.44
TRIM35-203ENST00000521253 DHRS12A0PJE2 317 aa17.8■□□□□ 0.44
TRIM35-203ENST00000521253 SLC16A7O60669 478 aa17.8■□□□□ 0.44
TRIM35-203ENST00000521253 PTHP01270 115 aa17.8■□□□□ 0.44
TRIM35-203ENST00000521253 GASTP01350 101 aa17.8■□□□□ 0.44
TRIM35-203ENST00000521253 MSR1P21757 451 aa17.8■□□□□ 0.44
TRIM35-203ENST00000521253 GLRXP35754 106 aa17.8■□□□□ 0.44
TRIM35-203ENST00000521253 PSG4Q00888 419 aa17.8■□□□□ 0.44
TRIM35-203ENST00000521253 ENDOGQ14249 297 aaKnown RBP17.8■□□□□ 0.44
TRIM35-203ENST00000521253 FLOT2Q14254 428 aa17.8■□□□□ 0.44
TRIM35-203ENST00000521253 TBC1D28Q2M2D7 210 aa17.8■□□□□ 0.44
TRIM35-203ENST00000521253 BIVMQ86UB2 503 aa17.8■□□□□ 0.44
TRIM35-203ENST00000521253 AKR7LQ8NHP1 331 aa17.8■□□□□ 0.44
TRIM35-203ENST00000521253 CANT1Q8WVQ1 401 aa17.8■□□□□ 0.44
TRIM35-203ENST00000521253 IFT27Q9BW83 186 aa17.8■□□□□ 0.44
TRIM35-203ENST00000521253 ZNF416Q9BWM5 594 aa17.8■□□□□ 0.44
TRIM35-203ENST00000521253 EGLN3Q9H6Z9 239 aa17.8■□□□□ 0.44
TRIM35-203ENST00000521253 CDH20Q9HBT6 801 aa17.8■□□□□ 0.44
TRIM35-203ENST00000521253 EMC7Q9NPA0 242 aa17.8■□□□□ 0.44
TRIM35-203ENST00000521253 CMAHPQ9Y471 501 aa17.8■□□□□ 0.44
TRIM35-203ENST00000521253 ARFGEF3Q5TH69 2177 aa17.79■□□□□ 0.44
TRIM35-203ENST00000521253 ARPC3O15145 178 aa17.79■□□□□ 0.44
TRIM35-203ENST00000521253 GSC2O15499 205 aa17.79■□□□□ 0.44
TRIM35-203ENST00000521253 KHDRBS3O75525 346 aaKnown RBP17.79■□□□□ 0.44
TRIM35-203ENST00000521253 APEX1P27695 318 aaKnown RBP17.79■□□□□ 0.44
TRIM35-203ENST00000521253 EFNA4P52798 201 aa17.79■□□□□ 0.44
TRIM35-203ENST00000521253 UGT2A3Q6UWM9 527 aa17.79■□□□□ 0.44
TRIM35-203ENST00000521253 AQP11Q8NBQ7 271 aa17.79■□□□□ 0.44
TRIM35-203ENST00000521253 OR1J2Q8NGS2 313 aa17.79■□□□□ 0.44
TRIM35-203ENST00000521253 MRPL24Q96A35 216 aaKnown RBP17.79■□□□□ 0.44
TRIM35-203ENST00000521253 SORCS2Q96PQ0 1159 aa17.79■□□□□ 0.44
TRIM35-203ENST00000521253 DOK1Q99704 481 aa17.79■□□□□ 0.44
TRIM35-203ENST00000521253 CADM1Q9BY67 442 aaKnown RBP17.79■□□□□ 0.44
TRIM35-203ENST00000521253 OR2H1Q9GZK4 316 aa17.79■□□□□ 0.44
TRIM35-203ENST00000521253 NUAK2Q9H093 628 aa17.79■□□□□ 0.44
TRIM35-203ENST00000521253 RERGLQ9H628 205 aa17.79■□□□□ 0.44
TRIM35-203ENST00000521253 POMPQ9Y244 141 aa17.79■□□□□ 0.44
TRIM35-203ENST00000521253 CDH10Q9Y6N8 788 aa17.79■□□□□ 0.44
TRIM35-203ENST00000521253 NIPBLQ6KC79 2804 aaeCLIP17.78■□□□□ 0.44
TRIM35-203ENST00000521253 LY6HO94772 140 aa17.78■□□□□ 0.44
TRIM35-203ENST00000521253 SNAP29O95721 258 aa17.78■□□□□ 0.44
TRIM35-203ENST00000521253 FAM157BP0CG42 384 aa17.78■□□□□ 0.44
TRIM35-203ENST00000521253 STOMP27105 288 aa17.78■□□□□ 0.44
TRIM35-203ENST00000521253 APLNRP35414 380 aa17.78■□□□□ 0.44
TRIM35-203ENST00000521253 PPOXP50336 477 aa17.78■□□□□ 0.44
TRIM35-203ENST00000521253 PCBD1P61457 104 aa17.78■□□□□ 0.44
TRIM35-203ENST00000521253 RPS23P62266 143 aaKnown RBP17.78■□□□□ 0.44
TRIM35-203ENST00000521253 MICAQ29983 383 aa17.78■□□□□ 0.44
TRIM35-203ENST00000521253 CLEC12AQ5QGZ9 265 aa17.78■□□□□ 0.44
TRIM35-203ENST00000521253 LEG1Q6P5S2 330 aa17.78■□□□□ 0.44
TRIM35-203ENST00000521253 SPATA24Q86W54 205 aa17.78■□□□□ 0.44
TRIM35-203ENST00000521253 VRK1Q99986 396 aaPredicted RBP17.78■□□□□ 0.44
TRIM35-203ENST00000521253 MRPL37Q9BZE1 423 aaKnown RBP17.78■□□□□ 0.44
TRIM35-203ENST00000521253 WNT5BQ9H1J7 359 aa17.78■□□□□ 0.44
TRIM35-203ENST00000521253 LRMDAQ9H2I8 198 aa17.78■□□□□ 0.44
TRIM35-203ENST00000521253 OR51B6Q9H340 312 aa17.78■□□□□ 0.44
TRIM35-203ENST00000521253 FZR1Q9UM11 496 aa17.78■□□□□ 0.44
TRIM35-203ENST00000521253 COA3Q9Y2R0 106 aaPredicted RBP17.78■□□□□ 0.44
TRIM35-203ENST00000521253 TIMM10BQ9Y5J6 103 aa17.78■□□□□ 0.44
TRIM35-203ENST00000521253 C12orf71A8MTZ7 269 aa17.77■□□□□ 0.44
TRIM35-203ENST00000521253 RNF223E7ERA6 249 aa17.77■□□□□ 0.44
TRIM35-203ENST00000521253 F12P00748 615 aaPredicted RBP17.77■□□□□ 0.44
TRIM35-203ENST00000521253 CST1P01037 141 aa17.77■□□□□ 0.44
TRIM35-203ENST00000521253 HIST1H1CP16403 213 aaKnown RBP17.77■□□□□ 0.44
TRIM35-203ENST00000521253 NOS3P29474 1203 aa17.77■□□□□ 0.44
TRIM35-203ENST00000521253 OTPQ5XKR4 325 aa17.77■□□□□ 0.44
TRIM35-203ENST00000521253 RASSF6Q6ZTQ3 369 aa17.77■□□□□ 0.44
TRIM35-203ENST00000521253 JAZF1Q86VZ6 243 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms