RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 HTRA4P83105 476 aaPredicted RBP10.67□□□□□ -0.7
SYNPO-204ENST00000519664 CDK5Q00535 292 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 PIGTQ969N2 578 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 SORCS2Q96PQ0 1159 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 GPA33Q99795 319 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 SSX3Q99909 188 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 TMEM59Q9BXS4 323 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 HRH4Q9H3N8 390 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 OR52A1Q9UKL2 312 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 SIGLEC7Q9Y286 467 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 PCYT1BQ9Y5K3 369 aaPredicted RBP10.67□□□□□ -0.7
SYNPO-204ENST00000519664 TSPAN11A1L157 253 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 BLACEA4D250 179 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 TOR1AO14656 332 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 DIRAS3O95661 229 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 FCGR2AP12318 317 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 ADH6P28332 368 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 ZBTB37Q5TC79 503 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 TMEM81Q6P7N7 255 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 LSRQ86X29 649 aaPredicted RBP10.67□□□□□ -0.7
SYNPO-204ENST00000519664 OR4K15Q8NH41 348 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 SMIM19Q96E16 107 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 SDHAF2Q9NX18 166 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 B4GALT7Q9UBV7 327 aa10.67□□□□□ -0.7
SYNPO-204ENST00000519664 ABCA7Q8IZY2 2146 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 IFITM5A6NNB3 132 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 TXNL1O43396 289 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 MSX1P28360 303 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 MTCP1P56278 107 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 PPA1Q15181 289 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 EXOSC6Q5RKV6 272 aaKnown RBP10.66□□□□□ -0.7
SYNPO-204ENST00000519664 PGAP1Q75T13 922 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 ATF6BQ99941 703 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 TAS2R4Q9NYW5 299 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 PRELID3BQ9Y3B1 194 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 SPTY2D1-AS1A0A0U1RR47 76 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 A0A1B0GX78 115 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 A0A1W2PPC4 97 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 SHISA8B8ZZ34 492 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 CTRB1P17538 263 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 GABRB1P18505 474 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 ZNF93P35789 620 aaPredicted RBP10.66□□□□□ -0.7
SYNPO-204ENST00000519664 RPL27P61353 136 aaKnown RBP10.66□□□□□ -0.7
SYNPO-204ENST00000519664 DUSP2Q05923 314 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 HNF4GQ14541 408 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 ZNF169Q14929 603 aaPredicted RBP10.66□□□□□ -0.7
SYNPO-204ENST00000519664 AANATQ16613 207 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 CTRB2Q6GPI1 263 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 CBLN3Q6UW01 205 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 SGPP2Q8IWX5 399 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 ZNF454Q8N9F8 522 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 HAVCR2Q8TDQ0 301 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 RAB3CQ96E17 227 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 RNF32Q9H0A6 362 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 GAREM1Q9H706 876 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 ASH2LQ9UBL3 628 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 YBX2Q9Y2T7 364 aaKnown RBP10.66□□□□□ -0.7
SYNPO-204ENST00000519664 PMP2P02689 132 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 PI3P19957 117 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 SDHAP31040 664 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 RAD52P43351 418 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 CSRP3P50461 194 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 HYAL1Q12794 435 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 ARIH2OSQ8N7S6 290 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 OR10K1Q8NGX5 313 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 WDR34Q96EX3 536 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 COX14Q96I36 57 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 STEAP1Q9UHE8 339 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 EXO1Q9UQ84 846 aaKnown RBP10.66□□□□□ -0.7
SYNPO-204ENST00000519664 SIT1Q9Y3P8 196 aa10.66□□□□□ -0.7
SYNPO-204ENST00000519664 A0A0B4J2A0 478 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 FADS1O60427 444 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 GREM1O60565 184 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 ATF1P18846 271 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 THBS2P35442 1172 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 PPICP45877 212 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 MALLQ13021 153 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 KTI12Q96EK9 354 aaPredicted RBP10.65□□□□□ -0.7
SYNPO-204ENST00000519664 WFDC6Q9BQY6 131 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 PLEKHB1Q9UF11 243 aaPredicted RBP10.65□□□□□ -0.7
SYNPO-204ENST00000519664 SHPKQ9UHJ6 478 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 MRPS28Q9Y2Q9 187 aaKnown RBP10.65□□□□□ -0.7
SYNPO-204ENST00000519664 CACNA1DQ01668 2161 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 YKT6O15498 198 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 SNAPINO95295 136 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 INHBBP09529 407 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 EPXP11678 715 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 CAPZBP47756 277 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 NPY4RP50391 375 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 LAIR1Q6GTX8 287 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 GRINAQ7Z429 371 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 KIAA0907Q7Z7F0 614 aaPredicted RBP10.65□□□□□ -0.7
SYNPO-204ENST00000519664 AGBL5Q8NDL9 886 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 FOXRED1Q96CU9 486 aaPredicted RBP10.65□□□□□ -0.7
SYNPO-204ENST00000519664 NIT2Q9NQR4 276 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 TDRD15B5MCY1 1934 aaKnown RBP10.65□□□□□ -0.7
SYNPO-204ENST00000519664 A0A087WV62 115 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 CAMLGP49069 296 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 TAS2R20P59543 309 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 NR0B2Q15466 257 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms