RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 FAM171A2A8MVW0 826 aa18.39■□□□□ 0.53
LSM6-207ENST00000515311 ENTPD6O75354 484 aa18.39■□□□□ 0.53
LSM6-207ENST00000515311 WBP4O75554 376 aaKnown RBP18.39■□□□□ 0.53
LSM6-207ENST00000515311 SEC14L2O76054 403 aa18.39■□□□□ 0.53
LSM6-207ENST00000515311 FARS2O95363 451 aaKnown RBP18.39■□□□□ 0.53
LSM6-207ENST00000515311 HOXB1P14653 301 aaPredicted RBP18.39■□□□□ 0.53
LSM6-207ENST00000515311 HTR1FP30939 366 aa18.39■□□□□ 0.53
LSM6-207ENST00000515311 CCKARP32238 428 aa18.39■□□□□ 0.53
LSM6-207ENST00000515311 CDH11P55287 796 aa18.39■□□□□ 0.53
LSM6-207ENST00000515311 RPS7P62081 194 aaKnown RBP18.39■□□□□ 0.53
LSM6-207ENST00000515311 CCDC36Q8IYA8 594 aa18.39■□□□□ 0.53
LSM6-207ENST00000515311 MARCH7Q9H992 704 aa18.39■□□□□ 0.53
LSM6-207ENST00000515311 WARS2Q9UGM6 360 aaKnown RBP18.39■□□□□ 0.53
LSM6-207ENST00000515311 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.39■□□□□ 0.53
LSM6-207ENST00000515311 LRRK2Q5S007 2527 aa18.38■□□□□ 0.53
LSM6-207ENST00000515311 SH3D21A4FU49 640 aa18.38■□□□□ 0.53
LSM6-207ENST00000515311 OR5H1A6NKK0 313 aa18.38■□□□□ 0.53
LSM6-207ENST00000515311 HLA-DQA2P01906 255 aa18.38■□□□□ 0.53
LSM6-207ENST00000515311 TFP02787 698 aa18.38■□□□□ 0.53
LSM6-207ENST00000515311 GSTT1P30711 240 aa18.38■□□□□ 0.53
LSM6-207ENST00000515311 LSM6P62312 80 aaKnown RBP18.38■□□□□ 0.53
LSM6-207ENST00000515311 GGTLC2Q14390 218 aa18.38■□□□□ 0.53
LSM6-207ENST00000515311 TSC22D1Q15714 1073 aa18.38■□□□□ 0.53
LSM6-207ENST00000515311 SGCAQ16586 387 aa18.38■□□□□ 0.53
LSM6-207ENST00000515311 TBRG1Q3YBR2 411 aa18.38■□□□□ 0.53
LSM6-207ENST00000515311 KLHL24Q6TFL4 600 aa18.38■□□□□ 0.53
LSM6-207ENST00000515311 DPPA2Q7Z7J5 298 aa18.38■□□□□ 0.53
LSM6-207ENST00000515311 FOXN4Q96NZ1 517 aa18.38■□□□□ 0.53
LSM6-207ENST00000515311 ACTR6Q9GZN1 396 aa18.38■□□□□ 0.53
LSM6-207ENST00000515311 OBP2BQ9NPH6 170 aa18.38■□□□□ 0.53
LSM6-207ENST00000515311 SLC17A5Q9NRA2 495 aa18.38■□□□□ 0.53
LSM6-207ENST00000515311 MRPL22Q9NWU5 206 aaKnown RBP18.38■□□□□ 0.53
LSM6-207ENST00000515311 HAO2Q9NYQ3 351 aa18.38■□□□□ 0.53
LSM6-207ENST00000515311 KCNG2Q9UJ96 466 aa18.38■□□□□ 0.53
LSM6-207ENST00000515311 COMMD3-BMI1R4GMX3 469 aa18.38■□□□□ 0.53
LSM6-207ENST00000515311 A0A096LPE4 126 aa18.37■□□□□ 0.53
LSM6-207ENST00000515311 ARPC4-TTLL3A0A0A6YYG9 625 aa18.37■□□□□ 0.53
LSM6-207ENST00000515311 A0A1W2PPZ6 126 aa18.37■□□□□ 0.53
LSM6-207ENST00000515311 DENRO43583 198 aaKnown RBP18.37■□□□□ 0.53
LSM6-207ENST00000515311 MPZL1O95297 269 aa18.37■□□□□ 0.53
LSM6-207ENST00000515311 GPANK1O95872 356 aa18.37■□□□□ 0.53
LSM6-207ENST00000515311 SCG5P05408 212 aa18.37■□□□□ 0.53
LSM6-207ENST00000515311 CST2P09228 141 aa18.37■□□□□ 0.53
LSM6-207ENST00000515311 RNF224P0DH78 156 aa18.37■□□□□ 0.53
LSM6-207ENST00000515311 PPP3CBP16298 524 aa18.37■□□□□ 0.53
LSM6-207ENST00000515311 CDK5R2Q13319 367 aa18.37■□□□□ 0.53
LSM6-207ENST00000515311 HIKESHIQ53FT3 197 aa18.37■□□□□ 0.53
LSM6-207ENST00000515311 TIMM23BQ5SRD1 257 aa18.37■□□□□ 0.53
LSM6-207ENST00000515311 SSX8Q7RTT4 187 aa18.37■□□□□ 0.53
LSM6-207ENST00000515311 CNIH3Q8TBE1 160 aa18.37■□□□□ 0.53
LSM6-207ENST00000515311 C11orf40Q8WZ69 217 aa18.37■□□□□ 0.53
LSM6-207ENST00000515311 S100PBPQ96BU1 408 aa18.37■□□□□ 0.53
LSM6-207ENST00000515311 ZMYND19Q96E35 227 aaPredicted RBP18.37■□□□□ 0.53
LSM6-207ENST00000515311 WACQ9BTA9 647 aa18.37■□□□□ 0.53
LSM6-207ENST00000515311 AASSQ9UDR5 926 aa18.37■□□□□ 0.53
LSM6-207ENST00000515311 C12orf71A8MTZ7 269 aa18.36■□□□□ 0.53
LSM6-207ENST00000515311 HOXC12P31275 282 aa18.36■□□□□ 0.53
LSM6-207ENST00000515311 ENDOGQ14249 297 aaKnown RBP18.36■□□□□ 0.53
LSM6-207ENST00000515311 TEX30Q5JUR7 227 aa18.36■□□□□ 0.53
LSM6-207ENST00000515311 SKA3Q8IX90 412 aa18.36■□□□□ 0.53
LSM6-207ENST00000515311 TIGD4Q8IY51 512 aa18.36■□□□□ 0.53
LSM6-207ENST00000515311 ZNF511Q8NB15 262 aa18.36■□□□□ 0.53
LSM6-207ENST00000515311 OR10H5Q8NGA6 315 aa18.36■□□□□ 0.53
LSM6-207ENST00000515311 NANOS1Q8WY41 292 aaKnown RBP18.36■□□□□ 0.53
LSM6-207ENST00000515311 HTRA1Q92743 480 aa18.36■□□□□ 0.53
LSM6-207ENST00000515311 SH3GL3Q99963 347 aa18.36■□□□□ 0.53
LSM6-207ENST00000515311 EMC7Q9NPA0 242 aa18.36■□□□□ 0.53
LSM6-207ENST00000515311 NPDC1Q9NQX5 325 aaPredicted RBP18.36■□□□□ 0.53
LSM6-207ENST00000515311 AMDHD2Q9Y303 409 aa18.36■□□□□ 0.53
LSM6-207ENST00000515311 KLF2Q9Y5W3 355 aaPredicted RBP18.36■□□□□ 0.53
LSM6-207ENST00000515311 TVP23AA6NH52 213 aa18.35■□□□□ 0.53
LSM6-207ENST00000515311 ZNF823P16415 610 aa18.35■□□□□ 0.53
LSM6-207ENST00000515311 PAX7P23759 505 aa18.35■□□□□ 0.53
LSM6-207ENST00000515311 GRNP28799 593 aaKnown RBP18.35■□□□□ 0.53
LSM6-207ENST00000515311 PEX19P40855 299 aa18.35■□□□□ 0.53
LSM6-207ENST00000515311 MTNR1AP48039 350 aa18.35■□□□□ 0.53
LSM6-207ENST00000515311 UBE2NP61088 152 aaKnown RBP18.35■□□□□ 0.53
LSM6-207ENST00000515311 PCBD1P61457 104 aa18.35■□□□□ 0.53
LSM6-207ENST00000515311 ADAM8P78325 824 aa18.35■□□□□ 0.53
LSM6-207ENST00000515311 POU4F2Q12837 409 aa18.35■□□□□ 0.53
LSM6-207ENST00000515311 MEP1BQ16820 701 aa18.35■□□□□ 0.53
LSM6-207ENST00000515311 PCK2Q16822 640 aa18.35■□□□□ 0.53
LSM6-207ENST00000515311 SLC36A2Q495M3 483 aa18.35■□□□□ 0.53
LSM6-207ENST00000515311 UGT2A3Q6UWM9 527 aa18.35■□□□□ 0.53
LSM6-207ENST00000515311 LYPD4Q6UWN0 246 aa18.35■□□□□ 0.53
LSM6-207ENST00000515311 SLC16A14Q7RTX9 510 aa18.35■□□□□ 0.53
LSM6-207ENST00000515311 SYT9Q86SS6 491 aa18.35■□□□□ 0.53
LSM6-207ENST00000515311 LRRC18Q8N456 261 aa18.35■□□□□ 0.53
LSM6-207ENST00000515311 WDR31Q8NA23 367 aa18.35■□□□□ 0.53
LSM6-207ENST00000515311 HSD17B8Q92506 261 aa18.35■□□□□ 0.53
LSM6-207ENST00000515311 CNBD2Q96M20 576 aa18.35■□□□□ 0.53
LSM6-207ENST00000515311 INTS14Q96SY0 518 aa18.35■□□□□ 0.53
LSM6-207ENST00000515311 ZNF416Q9BWM5 594 aa18.35■□□□□ 0.53
LSM6-207ENST00000515311 KCNN2Q9H2S1 579 aa18.35■□□□□ 0.53
LSM6-207ENST00000515311 MOV10Q9HCE1 1003 aaKnown RBP18.35■□□□□ 0.53
LSM6-207ENST00000515311 ZNF224Q9NZL3 707 aa18.35■□□□□ 0.53
LSM6-207ENST00000515311 LRRC42Q9Y546 428 aa18.35■□□□□ 0.53
LSM6-207ENST00000515311 UBL3O95164 117 aa18.34■□□□□ 0.53
LSM6-207ENST00000515311 ENTPD1P49961 510 aa18.34■□□□□ 0.53
LSM6-207ENST00000515311 ZNF91Q05481 1191 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms