RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 DIRAS2Q96HU8 199 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 BMFQ96LC9 184 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 ZNF578Q96N58 590 aaPredicted RBP3.35□□□□□ -1.87
CAST-242ENST00000515063 KCNS3Q9BQ31 491 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 PRSS27Q9BQR3 290 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 C7orf50Q9BRJ6 194 aaKnown RBP3.35□□□□□ -1.87
CAST-242ENST00000515063 PCGF1Q9BSM1 259 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 ZNF426Q9BUY5 554 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 KATNB1Q9BVA0 655 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 TRMT61BQ9BVS5 477 aaKnown RBP3.35□□□□□ -1.87
CAST-242ENST00000515063 PLA2G12AQ9BZM1 189 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 PLA2G2FQ9BZM2 168 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 CHRNA10Q9GZZ6 450 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 MIXL1Q9H2W2 232 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 OR52D1Q9H346 318 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 SRMSQ9H3Y6 488 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 XKR8Q9H6D3 395 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 C8orf33Q9H7E9 229 aaPredicted RBP3.35□□□□□ -1.87
CAST-242ENST00000515063 PPP1R3EQ9H7J1 279 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 FOLH1BQ9HBA9 442 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 TMEM27Q9HBJ8 222 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 NEK6Q9HC98 313 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 FGF22Q9HCT0 170 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 HINT3Q9NQE9 182 aaKnown RBP3.35□□□□□ -1.87
CAST-242ENST00000515063 POLE4Q9NR33 117 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 CMC2Q9NRP2 79 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 ZNF275Q9NSD4 429 aaPredicted RBP3.35□□□□□ -1.87
CAST-242ENST00000515063 RBFOX1Q9NWB1 397 aaKnown RBP3.35□□□□□ -1.87
CAST-242ENST00000515063 SPHK1Q9NYA1 384 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 MRPL39Q9NYK5 338 aaKnown RBP3.35□□□□□ -1.87
CAST-242ENST00000515063 NKIRAS2Q9NYR9 191 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 TAS2R16Q9NYV7 291 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 ZNF624Q9P2J8 865 aaPredicted RBP3.35□□□□□ -1.87
CAST-242ENST00000515063 MUTYHQ9UIF7 546 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 KLHL21Q9UJP4 597 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 PILRAQ9UKJ1 303 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 SLC35A3Q9Y2D2 325 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 MED31Q9Y3C7 131 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 KCNE3Q9Y6H6 103 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 SESN1Q9Y6P5 492 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 FANCMQ8IYD8 2048 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 MYO7AQ13402 2215 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 A0A087WYN8 130 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 TRAV1-2A0A0B4J238 106 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 A0A0G2JN53 185 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 A0A0J9YY10 115 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 A0A1W2PQ09 198 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 A0A1W2PQF6 199 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 MEIOCA2RUB1 952 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 SYNDIG1LA6NDD5 238 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 EFCAB7A8K855 629 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 CENPXA8MT69 81 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 BTN3A3O00478 584 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 GABRPO00591 440 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 BHLHE40O14503 412 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 ARPC3O15145 178 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 CTDSPLO15194 276 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 OGG1O15527 345 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 LATO43561 262 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 RNF13O43567 381 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 HCRTR2O43614 444 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 PLPP2O43688 288 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 CHP2O43745 196 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 IDH3BO43837 385 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 FCMRO60667 390 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 SRPX2O60687 465 aaPredicted RBP3.34□□□□□ -1.87
CAST-242ENST00000515063 PRKRAO75569 313 aaKnown RBP3.34□□□□□ -1.87
CAST-242ENST00000515063 SNAPC5O75971 98 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 TPPPO94811 219 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 KDM4BO94953 1096 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 CLDN14O95500 239 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 TNFP01375 233 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 IFNGP01579 166 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 IGLV3-19P01714 112 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 THY1P04216 161 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 YES1P07947 543 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 CSF3P09919 207 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 SLC35E2P0CK97 266 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 C8orf89P0DMQ9 161 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 GLULP15104 373 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 SPNP16150 400 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 UGT2B7P16662 529 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 ERP29P30040 261 aaKnown RBP3.34□□□□□ -1.87
CAST-242ENST00000515063 LCN1P31025 176 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 SLC6A6P31641 620 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 AKT2P31751 481 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 ACTR1BP42025 376 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 RAD52P43351 418 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 RABIFP47224 123 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 RFX3P48380 749 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 F2RL1P55085 397 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 RAG2P55895 527 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 CLDN20P56880 219 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 RAB38P57729 211 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 ACTR1AP61163 376 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 RPS25P62851 125 aaKnown RBP3.34□□□□□ -1.87
CAST-242ENST00000515063 UBE2IP63279 158 aaKnown RBP3.34□□□□□ -1.87
CAST-242ENST00000515063 FABP5Q01469 135 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 HSF2Q03933 536 aa3.34□□□□□ -1.87
CAST-242ENST00000515063 LGALS3BPQ08380 585 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms