RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 SLC22A9Q8IVM8 553 aa1.16□□□□□ -2.22
NEDD4-211ENST00000514893 FAM86B1Q8N7N1 296 aa1.16□□□□□ -2.22
NEDD4-211ENST00000514893 VN1R2Q8NFZ6 395 aa1.16□□□□□ -2.22
NEDD4-211ENST00000514893 AKR7LQ8NHP1 331 aa1.16□□□□□ -2.22
NEDD4-211ENST00000514893 TMEM54Q969K7 222 aa1.16□□□□□ -2.22
NEDD4-211ENST00000514893 PDXPQ96GD0 296 aa1.16□□□□□ -2.22
NEDD4-211ENST00000514893 SLC41A3Q96GZ6 507 aa1.16□□□□□ -2.22
NEDD4-211ENST00000514893 CNDP1Q96KN2 507 aa1.16□□□□□ -2.22
NEDD4-211ENST00000514893 COL21A1Q96P44 957 aa1.16□□□□□ -2.22
NEDD4-211ENST00000514893 SERPINB12Q96P63 405 aa1.16□□□□□ -2.22
NEDD4-211ENST00000514893 TSSK3Q96PN8 268 aa1.16□□□□□ -2.22
NEDD4-211ENST00000514893 ATP5SQ99766 215 aa1.16□□□□□ -2.22
NEDD4-211ENST00000514893 CENPKQ9BS16 269 aa1.16□□□□□ -2.22
NEDD4-211ENST00000514893 CRACR2AQ9BSW2 395 aa1.16□□□□□ -2.22
NEDD4-211ENST00000514893 FAIM2Q9BWQ8 316 aa1.16□□□□□ -2.22
NEDD4-211ENST00000514893 SLC25A2Q9BXI2 301 aa1.16□□□□□ -2.22
NEDD4-211ENST00000514893 DEFB127Q9H1M4 99 aa1.16□□□□□ -2.22
NEDD4-211ENST00000514893 EDA2RQ9HAV5 297 aa1.16□□□□□ -2.22
NEDD4-211ENST00000514893 FAM49BQ9NUQ9 324 aa1.16□□□□□ -2.22
NEDD4-211ENST00000514893 ETNK2Q9NVF9 386 aa1.16□□□□□ -2.22
NEDD4-211ENST00000514893 PTTG3PQ9NZH4 202 aa1.16□□□□□ -2.22
NEDD4-211ENST00000514893 UVRAGQ9P2Y5 699 aa1.16□□□□□ -2.22
NEDD4-211ENST00000514893 CTSFQ9UBX1 484 aa1.16□□□□□ -2.22
NEDD4-211ENST00000514893 NUP50Q9UKX7 468 aa1.16□□□□□ -2.22
NEDD4-211ENST00000514893 PEX16Q9Y5Y5 336 aa1.16□□□□□ -2.22
NEDD4-211ENST00000514893 CNTNAP1P78357 1384 aa1.16□□□□□ -2.22
NEDD4-211ENST00000514893 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.16□□□□□ -2.22
NEDD4-211ENST00000514893 CDHR2Q9BYE9 1310 aa1.15□□□□□ -2.22
NEDD4-211ENST00000514893 PHF3Q92576 2039 aaKnown RBP1.15□□□□□ -2.22
NEDD4-211ENST00000514893 ARPC4-TTLL3A0A0A6YYG9 625 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 SMCO3A2RU48 225 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 OR52A4PA6NMU1 304 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 LRRIQ3A6PVS8 624 aaPredicted RBP1.15□□□□□ -2.23
NEDD4-211ENST00000514893 L7N2F9 121 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 RRP8O43159 456 aaKnown RBP1.15□□□□□ -2.23
NEDD4-211ENST00000514893 DPM1O60762 260 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 SPAG6O75602 509 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 UPK3AO75631 287 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 CIB2O75838 187 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 VAMP5O95183 116 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 UTS2O95399 124 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 TMEM50AO95807 157 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 EIF4EP06730 217 aaKnown RBP1.15□□□□□ -2.23
NEDD4-211ENST00000514893 OR56A5P0C7T3 313 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 ZDHHC11BP0C7U3 371 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 ZNF806P0C7X5 589 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 UBTFL6P0CB48 400 aaPredicted RBP1.15□□□□□ -2.23
NEDD4-211ENST00000514893 IGHV3-43DP0DP04 118 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 MCF2P10911 925 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 FOLR1P15328 257 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 EIF2S2P20042 333 aaKnown RBP1.15□□□□□ -2.23
NEDD4-211ENST00000514893 KITLGP21583 273 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 CEACAM3P40198 252 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 RFX3P48380 749 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 CX3CR1P49238 355 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 CCNG1P51959 295 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 FBXW4P57775 412 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 VSX2P58304 361 aaPredicted RBP1.15□□□□□ -2.23
NEDD4-211ENST00000514893 MRPS22P82650 360 aaKnown RBP1.15□□□□□ -2.23
NEDD4-211ENST00000514893 ZNF92Q03936 586 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 DDX39BQ13838 428 aaKnown RBP1.15□□□□□ -2.23
NEDD4-211ENST00000514893 ZNF266Q14584 549 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 PON3Q15166 354 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 IRF4Q15306 451 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 RABL6Q3YEC7 729 aaPredicted RBP1.15□□□□□ -2.23
NEDD4-211ENST00000514893 C6orf226Q5I0X4 101 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 SOHLH1Q5JUK2 328 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 PPM1LQ5SGD2 360 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 METTL21CQ5VZV1 264 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 KRTAP5-10Q6L8G5 202 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 RNASEKQ6P5S7 137 aaKnown RBP1.15□□□□□ -2.23
NEDD4-211ENST00000514893 FAM92BQ6ZTR7 304 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 RUFY3Q7L099 469 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 H2BFWTQ7Z2G1 175 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 LGI3Q8N145 548 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 LRRC75A-AS1Q8N1F1 130 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 OR2L3Q8NG85 312 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 OR9K2Q8NGE7 335 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 OR1S2Q8NGQ3 325 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 PLPPR1Q8TBJ4 325 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 CD300LFQ8TDQ1 290 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 KIFAP3Q92845 792 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 EEF1AKMT3Q96AZ1 226 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 PIK3IP1Q96FE7 263 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 PKNOX2Q96KN3 472 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 ZNF382Q96SR6 550 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 SLC29A1Q99808 456 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 KCTD14Q9BQ13 255 aaPredicted RBP1.15□□□□□ -2.23
NEDD4-211ENST00000514893 TCHPQ9BT92 498 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 NIPAL2Q9H841 368 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 METTL7AQ9H8H3 244 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 BEX1Q9HBH7 125 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 NT5MQ9NPB1 228 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 GPATCH2LQ9NWQ4 482 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 SLC2A8Q9NY64 477 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 COX16Q9P0S2 106 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 ZNF639Q9UID6 485 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 ZNF230Q9UIE0 474 aaPredicted RBP1.15□□□□□ -2.23
NEDD4-211ENST00000514893 HPCAL4Q9UM19 191 aa1.15□□□□□ -2.23
NEDD4-211ENST00000514893 ING4Q9UNL4 249 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms