RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 SRP72O76094 671 aaKnown RBP5.06□□□□□ -1.6
NUP54-215ENST00000514313 IFNW1P05000 195 aa5.06□□□□□ -1.6
NUP54-215ENST00000514313 IGHV4-34P06331 123 aa5.06□□□□□ -1.6
NUP54-215ENST00000514313 ZNF30P17039 623 aa5.06□□□□□ -1.6
NUP54-215ENST00000514313 GPX4P36969 197 aaPredicted RBP5.06□□□□□ -1.6
NUP54-215ENST00000514313 DNAJC3Q13217 504 aa5.06□□□□□ -1.6
NUP54-215ENST00000514313 GGTLC2Q14390 218 aa5.06□□□□□ -1.6
NUP54-215ENST00000514313 ZSCAN26Q16670 478 aa5.06□□□□□ -1.6
NUP54-215ENST00000514313 COA6Q5JTJ3 125 aaKnown RBP5.06□□□□□ -1.6
NUP54-215ENST00000514313 ZNF621Q6ZSS3 439 aa5.06□□□□□ -1.6
NUP54-215ENST00000514313 FAM71E2Q8N5Q1 922 aa5.06□□□□□ -1.6
NUP54-215ENST00000514313 ZFP41Q8N8Y5 198 aa5.06□□□□□ -1.6
NUP54-215ENST00000514313 FAM3DQ96BQ1 224 aa5.06□□□□□ -1.6
NUP54-215ENST00000514313 MRPL37Q9BZE1 423 aaKnown RBP5.06□□□□□ -1.6
NUP54-215ENST00000514313 DEC1Q9P2X7 70 aa5.06□□□□□ -1.6
NUP54-215ENST00000514313 PDS5BQ9NTI5 1447 aa5.06□□□□□ -1.6
NUP54-215ENST00000514313 MROH7-TTC4A0A0A0MT08 1334 aa5.05□□□□□ -1.6
NUP54-215ENST00000514313 NUPL2O15504 423 aaKnown RBP5.05□□□□□ -1.6
NUP54-215ENST00000514313 HLA-HP01893 362 aa5.05□□□□□ -1.6
NUP54-215ENST00000514313 CTRB1P17538 263 aa5.05□□□□□ -1.6
NUP54-215ENST00000514313 NUDT1P36639 197 aa5.05□□□□□ -1.6
NUP54-215ENST00000514313 BCAP31P51572 246 aa5.05□□□□□ -1.6
NUP54-215ENST00000514313 PON3Q15166 354 aa5.05□□□□□ -1.6
NUP54-215ENST00000514313 PSMD5Q16401 504 aa5.05□□□□□ -1.6
NUP54-215ENST00000514313 STUMQ69YW2 141 aa5.05□□□□□ -1.6
NUP54-215ENST00000514313 MREGQ8N565 214 aa5.05□□□□□ -1.6
NUP54-215ENST00000514313 LRRC75AQ8NAA5 344 aa5.05□□□□□ -1.6
NUP54-215ENST00000514313 OR2A1Q8NGT9 310 aa5.05□□□□□ -1.6
NUP54-215ENST00000514313 MCOLN3Q8TDD5 553 aa5.05□□□□□ -1.6
NUP54-215ENST00000514313 EEF1AKMT3Q96AZ1 226 aa5.05□□□□□ -1.6
NUP54-215ENST00000514313 ZYG11BQ9C0D3 744 aa5.05□□□□□ -1.6
NUP54-215ENST00000514313 NANOGQ9H9S0 305 aa5.05□□□□□ -1.6
NUP54-215ENST00000514313 ACP6Q9NPH0 428 aa5.05□□□□□ -1.6
NUP54-215ENST00000514313 PCYOX1Q9UHG3 505 aa5.05□□□□□ -1.6
NUP54-215ENST00000514313 TP53TG5Q9Y2B4 290 aa5.05□□□□□ -1.6
NUP54-215ENST00000514313 MRPS18BQ9Y676 258 aaKnown RBP5.05□□□□□ -1.6
NUP54-215ENST00000514313 GABRR3A8MPY1 467 aa5.04□□□□□ -1.6
NUP54-215ENST00000514313 K7EMT4 169 aa5.04□□□□□ -1.6
NUP54-215ENST00000514313 XKRYO14609 159 aa5.04□□□□□ -1.6
NUP54-215ENST00000514313 SLC9A3R1O14745 358 aaPredicted RBP5.04□□□□□ -1.6
NUP54-215ENST00000514313 ZNF861PO60384 105 aa5.04□□□□□ -1.6
NUP54-215ENST00000514313 CT45A6P0DMU7 189 aa5.04□□□□□ -1.6
NUP54-215ENST00000514313 CT45A5P0DMU8 189 aa5.04□□□□□ -1.6
NUP54-215ENST00000514313 CT45A7P0DMV0 189 aa5.04□□□□□ -1.6
NUP54-215ENST00000514313 ZNF17P17021 662 aa5.04□□□□□ -1.6
NUP54-215ENST00000514313 RCC1P18754 421 aaPredicted RBP5.04□□□□□ -1.6
NUP54-215ENST00000514313 ELK1P19419 428 aa5.04□□□□□ -1.6
NUP54-215ENST00000514313 SRMP19623 302 aa5.04□□□□□ -1.6
NUP54-215ENST00000514313 CD82P27701 267 aa5.04□□□□□ -1.6
NUP54-215ENST00000514313 MAS1LP35410 378 aa5.04□□□□□ -1.6
NUP54-215ENST00000514313 OR7A5Q15622 319 aa5.04□□□□□ -1.6
NUP54-215ENST00000514313 CT45A1Q5HYN5 189 aa5.04□□□□□ -1.6
NUP54-215ENST00000514313 HDDC2Q7Z4H3 204 aa5.04□□□□□ -1.6
NUP54-215ENST00000514313 TMEM150AQ86TG1 271 aa5.04□□□□□ -1.6
NUP54-215ENST00000514313 PROKR2Q8NFJ6 384 aa5.04□□□□□ -1.6
NUP54-215ENST00000514313 CT45A3Q8NHU0 189 aa5.04□□□□□ -1.6
NUP54-215ENST00000514313 IL22RA2Q969J5 263 aa5.04□□□□□ -1.6
NUP54-215ENST00000514313 CERS2Q96G23 380 aa5.04□□□□□ -1.6
NUP54-215ENST00000514313 JSRP1Q96MG2 331 aaPredicted RBP5.04□□□□□ -1.6
NUP54-215ENST00000514313 COL21A1Q96P44 957 aa5.04□□□□□ -1.6
NUP54-215ENST00000514313 OR2AG1Q9H205 316 aa5.04□□□□□ -1.6
NUP54-215ENST00000514313 TMEM38AQ9H6F2 299 aa5.04□□□□□ -1.6
NUP54-215ENST00000514313 SMKR1H3BMG3 65 aa5.03□□□□□ -1.6
NUP54-215ENST00000514313 TRDMT1O14717 391 aaKnown RBP5.03□□□□□ -1.6
NUP54-215ENST00000514313 KMOO15229 486 aa5.03□□□□□ -1.6
NUP54-215ENST00000514313 SUPT3HO75486 399 aa5.03□□□□□ -1.6
NUP54-215ENST00000514313 SCELO95171 688 aa5.03□□□□□ -1.6
NUP54-215ENST00000514313 PLEKP08567 350 aaPredicted RBP5.03□□□□□ -1.6
NUP54-215ENST00000514313 CLTAP09496 248 aa5.03□□□□□ -1.6
NUP54-215ENST00000514313 SMIM10L1P0DMW3 83 aa5.03□□□□□ -1.6
NUP54-215ENST00000514313 CPN2P22792 545 aa5.03□□□□□ -1.6
NUP54-215ENST00000514313 NBL1P41271 181 aa5.03□□□□□ -1.6
NUP54-215ENST00000514313 RND2P52198 227 aa5.03□□□□□ -1.6
NUP54-215ENST00000514313 SMARCB1Q12824 385 aa5.03□□□□□ -1.6
NUP54-215ENST00000514313 CCNJQ5T5M9 372 aa5.03□□□□□ -1.6
NUP54-215ENST00000514313 ANKRD22Q5VYY1 191 aa5.03□□□□□ -1.6
NUP54-215ENST00000514313 FAM122BQ7Z309 247 aa5.03□□□□□ -1.6
NUP54-215ENST00000514313 OAFQ86UD1 273 aa5.03□□□□□ -1.6
NUP54-215ENST00000514313 APRG1Q8IVJ8 170 aa5.03□□□□□ -1.6
NUP54-215ENST00000514313 SPAG16Q8N0X2 631 aa5.03□□□□□ -1.6
NUP54-215ENST00000514313 ACTRT1Q8TDG2 376 aa5.03□□□□□ -1.6
NUP54-215ENST00000514313 SMIM10Q96HG1 83 aa5.03□□□□□ -1.6
NUP54-215ENST00000514313 OPALINQ96PE5 141 aa5.03□□□□□ -1.6
NUP54-215ENST00000514313 TSSK3Q96PN8 268 aa5.03□□□□□ -1.6
NUP54-215ENST00000514313 NRTNQ99748 197 aa5.03□□□□□ -1.6
NUP54-215ENST00000514313 IL22Q9GZX6 179 aa5.03□□□□□ -1.6
NUP54-215ENST00000514313 ZNF226Q9NYT6 803 aa5.03□□□□□ -1.6
NUP54-215ENST00000514313 ZNF629Q9UEG4 869 aaPredicted RBP5.03□□□□□ -1.6
NUP54-215ENST00000514313 RCL1Q9Y2P8 373 aaKnown RBP5.03□□□□□ -1.6
NUP54-215ENST00000514313 NFASCO94856 1347 aa5.02□□□□□ -1.61
NUP54-215ENST00000514313 BCKDKO14874 412 aa5.02□□□□□ -1.61
NUP54-215ENST00000514313 OTCP00480 354 aa5.02□□□□□ -1.61
NUP54-215ENST00000514313 BGLAPP02818 100 aa5.02□□□□□ -1.61
NUP54-215ENST00000514313 ARG1P05089 322 aa5.02□□□□□ -1.61
NUP54-215ENST00000514313 PRKACAP17612 351 aa5.02□□□□□ -1.61
NUP54-215ENST00000514313 CCNE1P24864 410 aa5.02□□□□□ -1.61
NUP54-215ENST00000514313 CLDN18P56856 261 aa5.02□□□□□ -1.61
NUP54-215ENST00000514313 RPS15AP62244 130 aaKnown RBP5.02□□□□□ -1.61
NUP54-215ENST00000514313 SLC7A9P82251 487 aa5.02□□□□□ -1.61
NUP54-215ENST00000514313 TTLL9Q3SXZ7 439 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms