RNA–Protein interactions for RNA: ENST00000514232.1

SMARCAD1-208, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 3

Gene SMARCAD1, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-208ENST00000514232 TRPM3Q9HCF6 1732 aaPredicted RBP1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 FRMPD3Q5JV73 1810 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 SPEF2Q9C093 1822 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 A0A087X0T9 212 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 PVALEFA0A1B0GWK0 134 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 CIB4A0PJX0 185 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 PRSS37A4D1T9 235 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 GMNCA6NCL1 334 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 BTBD17A6NE02 478 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 FAM47DPA6NHR8 397 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 GOLGA6L10A6NI86 522 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 ZNF705EA8MWA4 302 aaPredicted RBP1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 ANKRD63C9JTQ0 380 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 F8VZ95 297 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 TMX2-CTNND1H3BSU7 103 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 CETN3O15182 167 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 SLC31A2O15432 143 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 TIMM8AO60220 97 aaPredicted RBP1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 B4GALT2O60909 372 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 SNNO75324 88 aaPredicted RBP1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 LCA5LO95447 670 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 STAMBPO95630 424 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 FGFR1OPO95684 399 aaKnown RBP1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 TSPAN12O95859 305 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 IL1BP01584 269 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 IGHV3-48P01763 117 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 FGGP02679 453 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 SHBGP04278 402 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 IGKV3-11P04433 115 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 CSF3P09919 207 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 FAM228BP0C875 321 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 MMP11P24347 488 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 HNRNPH3P31942 346 aaKnown RBP1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 NUDT1P36639 197 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 HSPA9P38646 679 aaKnown RBP1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 SLCO1A2P46721 670 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 CYB561P49447 251 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 CASP4P49662 377 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 PLTPP55058 493 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 UCNP55089 124 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 DLX1P56177 255 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 RIPPLY3P57055 190 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 VSX2P58304 361 aaPredicted RBP1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 RPL23AP62750 156 aaKnown RBP1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 TNNC1P63316 161 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 IFFO1Q0D2I5 559 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 TWF1Q12792 350 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 PDIA2Q13087 525 aaKnown RBP1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 GPM6BQ13491 265 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 CLINT1Q14677 625 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 SNCBQ16143 134 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 DUSP7Q16829 419 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 TIGITQ495A1 244 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 SFT2D3Q587I9 215 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 THEM4Q5T1C6 240 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 PDZK1Q5T2W1 519 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 AGBL2Q5U5Z8 902 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 PYHIN1Q6K0P9 492 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 ZNF620Q6ZNG0 422 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 TMEM179Q6ZVK1 233 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 ABHD13Q7L211 337 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 OTUD6AQ7L8S5 288 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 TMEM135Q86UB9 458 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 ZNF546Q86UE3 836 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 C17orf82Q86X59 251 aaPredicted RBP1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 CD302Q8IX05 232 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 ENTHD1Q8IYW4 607 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 LRRC34Q8IZ02 419 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 RDH10Q8IZV5 341 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 CEND1Q8N111 149 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 LIX1Q8N485 282 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 KIF2BQ8N4N8 673 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 RNF10Q8N5U6 811 aaKnown RBP1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 ARIH2OSQ8N7S6 290 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 OR56B2PQ8NGI1 322 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 OR52H1Q8NGJ2 320 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 OR2L8Q8NGY9 312 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 RHEBL1Q8TAI7 183 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 DTX3LQ8TDB6 740 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 RNF138Q8WVD3 245 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 SCFD1Q8WVM8 642 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 FAM3CQ92520 227 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 N4BP2L2Q92802 583 aaPredicted RBP1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 FBXO32Q969P5 355 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 LRRC45Q96CN5 670 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 DNAJC19Q96DA6 116 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 ZNF799Q96GE5 643 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 ATP6V1G3Q96LB4 118 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 SLC38A2Q96QD8 506 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 MTMR9Q96QG7 549 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 MYCBPQ99417 103 aaPredicted RBP1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 SORT1Q99523 831 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 KLHDC3Q9BQ90 382 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 CENPKQ9BS16 269 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 OSBPL10Q9BXB5 764 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 SLC25A39Q9BZJ4 359 aaPredicted RBP1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 OR11A1Q9GZK7 315 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 VCXQ9H320 206 aa1.41□□□□□ -2.18
SMARCAD1-208ENST00000514232 YY1AP1Q9H869 796 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms