RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 PTHP01270 115 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 CRYAAP02489 173 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 ZNF14P17017 642 aaPredicted RBP11.19□□□□□ -0.62
COL6A6-203ENST00000511332 GIPRP48546 466 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 CENPAP49450 140 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 SLC25A1P53007 311 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 CDH11P55287 796 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 CDK5Q00535 292 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 HSF2Q03933 536 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 PLP2Q04941 152 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 PIGFQ07326 219 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 SPOCK1Q08629 439 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 AQP6Q13520 282 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 DAG1Q14118 895 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 CRMP1Q14194 572 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 ETFDHQ16134 617 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 C20orf204Q6ZNR8 217 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 SYT9Q86SS6 491 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 OR6V1Q8N148 313 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 CYB561A3Q8NBI2 242 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 PROKR2Q8NFJ6 384 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 IL17RDQ8NFM7 739 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 KBTBD8Q8NFY9 601 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 PLEKHA8Q96JA3 519 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 TSSK2Q96PF2 358 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 FN3KQ9H479 309 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 PLEKHF2Q9H8W4 249 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 UBTD1Q9HAC8 227 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 NOX3Q9HBY0 568 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 POU2F3Q9UKI9 436 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 B9D1Q9UPM9 204 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 COA3Q9Y2R0 106 aaPredicted RBP11.19□□□□□ -0.62
COL6A6-203ENST00000511332 POLR1DQ9Y2S0 133 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 CADP27708 2225 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 ABCA12Q86UK0 2595 aa11.19□□□□□ -0.62
COL6A6-203ENST00000511332 DSCAMO60469 2012 aa11.18□□□□□ -0.62
COL6A6-203ENST00000511332 IQCMA0A1B0GVH7 501 aa11.18□□□□□ -0.62
COL6A6-203ENST00000511332 A0A1W2PPR1 153 aa11.18□□□□□ -0.62
COL6A6-203ENST00000511332 SHISA9B4DS77 424 aa11.18□□□□□ -0.62
COL6A6-203ENST00000511332 DCTN6O00399 190 aa11.18□□□□□ -0.62
COL6A6-203ENST00000511332 EI24O14681 340 aa11.18□□□□□ -0.62
COL6A6-203ENST00000511332 HS3ST1O14792 307 aa11.18□□□□□ -0.62
COL6A6-203ENST00000511332 SURF4O15260 269 aa11.18□□□□□ -0.62
COL6A6-203ENST00000511332 BAG2O95816 211 aa11.18□□□□□ -0.62
COL6A6-203ENST00000511332 ALPLP05186 524 aa11.18□□□□□ -0.62
COL6A6-203ENST00000511332 CELA3BP08861 270 aa11.18□□□□□ -0.62
COL6A6-203ENST00000511332 MMP7P09237 267 aaPredicted RBP11.18□□□□□ -0.62
COL6A6-203ENST00000511332 GAAP10253 952 aa11.18□□□□□ -0.62
COL6A6-203ENST00000511332 ALDH3A2P51648 485 aa11.18□□□□□ -0.62
COL6A6-203ENST00000511332 RAD23AP54725 363 aa11.18□□□□□ -0.62
COL6A6-203ENST00000511332 KRTAP10-9P60411 292 aa11.18□□□□□ -0.62
COL6A6-203ENST00000511332 LSM6P62312 80 aaKnown RBP11.18□□□□□ -0.62
COL6A6-203ENST00000511332 NAAAQ02083 359 aa11.18□□□□□ -0.62
COL6A6-203ENST00000511332 SCRN3Q0VDG4 424 aa11.18□□□□□ -0.62
COL6A6-203ENST00000511332 RCN1Q15293 331 aa11.18□□□□□ -0.62
COL6A6-203ENST00000511332 KCNMB1Q16558 191 aa11.18□□□□□ -0.62
COL6A6-203ENST00000511332 ZNF672Q499Z4 452 aaPredicted RBP11.18□□□□□ -0.62
COL6A6-203ENST00000511332 PAMR1Q6UXH9 720 aa11.18□□□□□ -0.62
COL6A6-203ENST00000511332 OR10H5Q8NGA6 315 aa11.18□□□□□ -0.62
COL6A6-203ENST00000511332 FBXW5Q969U6 566 aa11.18□□□□□ -0.62
COL6A6-203ENST00000511332 EME1Q96AY2 570 aa11.18□□□□□ -0.62
COL6A6-203ENST00000511332 ZNF416Q9BWM5 594 aa11.18□□□□□ -0.62
COL6A6-203ENST00000511332 GABARAPL3Q9BY60 117 aa11.18□□□□□ -0.62
COL6A6-203ENST00000511332 SRA1Q9HD15 236 aaKnown RBP11.18□□□□□ -0.62
COL6A6-203ENST00000511332 USE1Q9NZ43 259 aa11.18□□□□□ -0.62
COL6A6-203ENST00000511332 TMEFF2Q9UIK5 374 aaPredicted RBP11.18□□□□□ -0.62
COL6A6-203ENST00000511332 PRR23D1E9PI22 279 aaPredicted RBP11.17□□□□□ -0.62
COL6A6-203ENST00000511332 ATP6V1G2-DDX39BF2Z307 99 aa11.17□□□□□ -0.62
COL6A6-203ENST00000511332 MITFO75030 526 aaPredicted RBP11.17□□□□□ -0.62
COL6A6-203ENST00000511332 PLAUP00749 431 aa11.17□□□□□ -0.62
COL6A6-203ENST00000511332 HLA-DQA2P01906 255 aa11.17□□□□□ -0.62
COL6A6-203ENST00000511332 SERPINA5P05154 406 aa11.17□□□□□ -0.62
COL6A6-203ENST00000511332 PATE4P0C8F1 98 aa11.17□□□□□ -0.62
COL6A6-203ENST00000511332 PRR23D2P0DMB1 279 aaPredicted RBP11.17□□□□□ -0.62
COL6A6-203ENST00000511332 ZNF32P17041 273 aa11.17□□□□□ -0.62
COL6A6-203ENST00000511332 SPI1P17947 270 aa11.17□□□□□ -0.62
COL6A6-203ENST00000511332 BLVRAP53004 296 aa11.17□□□□□ -0.62
COL6A6-203ENST00000511332 ENDOGQ14249 297 aaKnown RBP11.17□□□□□ -0.62
COL6A6-203ENST00000511332 RAB39AQ14964 217 aa11.17□□□□□ -0.62
COL6A6-203ENST00000511332 PTGES3Q15185 160 aaKnown RBP11.17□□□□□ -0.62
COL6A6-203ENST00000511332 TBC1D28Q2M2D7 210 aa11.17□□□□□ -0.62
COL6A6-203ENST00000511332 PABPC1L2AQ5JQF8 200 aa11.17□□□□□ -0.62
COL6A6-203ENST00000511332 ZNF362Q5T0B9 420 aaPredicted RBP11.17□□□□□ -0.62
COL6A6-203ENST00000511332 ACSM5Q6NUN0 579 aa11.17□□□□□ -0.62
COL6A6-203ENST00000511332 CDH24Q86UP0 819 aa11.17□□□□□ -0.62
COL6A6-203ENST00000511332 MYPOPQ86VE0 399 aaPredicted RBP11.17□□□□□ -0.62
COL6A6-203ENST00000511332 ALDH16A1Q8IZ83 802 aa11.17□□□□□ -0.62
COL6A6-203ENST00000511332 CBR4Q8N4T8 237 aa11.17□□□□□ -0.62
COL6A6-203ENST00000511332 SLC26A10Q8NG04 563 aa11.17□□□□□ -0.62
COL6A6-203ENST00000511332 OR4F15Q8NGB8 312 aa11.17□□□□□ -0.62
COL6A6-203ENST00000511332 OR9Q1Q8NGQ5 310 aa11.17□□□□□ -0.62
COL6A6-203ENST00000511332 OR1J2Q8NGS2 313 aa11.17□□□□□ -0.62
COL6A6-203ENST00000511332 FGFBP3Q8TAT2 258 aa11.17□□□□□ -0.62
COL6A6-203ENST00000511332 AKAP1Q92667 903 aaKnown RBP eCLIP11.17□□□□□ -0.62
COL6A6-203ENST00000511332 FBXO17Q96EF6 278 aa11.17□□□□□ -0.62
COL6A6-203ENST00000511332 ZNF75AQ96N20 296 aa11.17□□□□□ -0.62
COL6A6-203ENST00000511332 FOXN4Q96NZ1 517 aa11.17□□□□□ -0.62
COL6A6-203ENST00000511332 DDOQ99489 341 aa11.17□□□□□ -0.62
COL6A6-203ENST00000511332 NMNAT2Q9BZQ4 307 aa11.17□□□□□ -0.62
COL6A6-203ENST00000511332 RIBC2Q9H4K1 309 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms