RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 ALDH16A1Q8IZ83 802 aa13.13□□□□□ -0.31
TPM3-219ENST00000509409 GTF3AQ92664 365 aaKnown RBP13.13□□□□□ -0.31
TPM3-219ENST00000509409 ALG12Q9BV10 488 aa13.13□□□□□ -0.31
TPM3-219ENST00000509409 FNDC11Q9BVV2 318 aa13.13□□□□□ -0.31
TPM3-219ENST00000509409 SMURF2Q9HAU4 748 aa13.13□□□□□ -0.31
TPM3-219ENST00000509409 FGFR1OP2Q9NVK5 253 aa13.13□□□□□ -0.31
TPM3-219ENST00000509409 UGT2A1Q9Y4X1 527 aa13.13□□□□□ -0.31
TPM3-219ENST00000509409 HTR3EA5X5Y0 456 aa13.12□□□□□ -0.31
TPM3-219ENST00000509409 NPIPB13A6NJU9 1138 aa13.12□□□□□ -0.31
TPM3-219ENST00000509409 NPIPB4C9JG80 1138 aa13.12□□□□□ -0.31
TPM3-219ENST00000509409 SPRY3O43610 288 aa13.12□□□□□ -0.31
TPM3-219ENST00000509409 IGHV3-13P01766 116 aa13.12□□□□□ -0.31
TPM3-219ENST00000509409 TSPAN19P0C672 248 aa13.12□□□□□ -0.31
TPM3-219ENST00000509409 H2AFXP16104 143 aaPredicted RBP13.12□□□□□ -0.31
TPM3-219ENST00000509409 PSG4Q00888 419 aa13.12□□□□□ -0.31
TPM3-219ENST00000509409 SCGB2A2Q13296 93 aa13.12□□□□□ -0.31
TPM3-219ENST00000509409 HFEQ30201 348 aa13.12□□□□□ -0.31
TPM3-219ENST00000509409 ACSM5Q6NUN0 579 aa13.12□□□□□ -0.31
TPM3-219ENST00000509409 THSD4Q6ZMP0 1018 aa13.12□□□□□ -0.31
TPM3-219ENST00000509409 MEX3DQ86XN8 651 aaKnown RBP13.12□□□□□ -0.31
TPM3-219ENST00000509409 OR51A7Q8NH64 312 aa13.12□□□□□ -0.31
TPM3-219ENST00000509409 NABP1Q96AH0 204 aa13.12□□□□□ -0.31
TPM3-219ENST00000509409 POM121L2Q96KW2 1035 aa13.12□□□□□ -0.31
TPM3-219ENST00000509409 PRRC1Q96M27 445 aa13.12□□□□□ -0.31
TPM3-219ENST00000509409 ZNF665Q9H7R5 613 aa13.12□□□□□ -0.31
TPM3-219ENST00000509409 SAP30LQ9HAJ7 183 aa13.12□□□□□ -0.31
TPM3-219ENST00000509409 RHCGQ9UBD6 479 aa13.12□□□□□ -0.31
TPM3-219ENST00000509409 A4GNTQ9UNA3 340 aa13.12□□□□□ -0.31
TPM3-219ENST00000509409 HIF3AQ9Y2N7 669 aa13.12□□□□□ -0.31
TPM3-219ENST00000509409 TIMM10BQ9Y5J6 103 aa13.12□□□□□ -0.31
TPM3-219ENST00000509409 CAPN7Q9Y6W3 813 aa13.12□□□□□ -0.31
TPM3-219ENST00000509409 LOC100509620A0A075B734 347 aa13.11□□□□□ -0.31
TPM3-219ENST00000509409 TRAV20A0A0B4J274 112 aa13.11□□□□□ -0.31
TPM3-219ENST00000509409 A0A1W2PPL8 197 aa13.11□□□□□ -0.31
TPM3-219ENST00000509409 PLSCR5A0PG75 271 aa13.11□□□□□ -0.31
TPM3-219ENST00000509409 CLDN25C9JDP6 229 aa13.11□□□□□ -0.31
TPM3-219ENST00000509409 GSTA4O15217 222 aa13.11□□□□□ -0.31
TPM3-219ENST00000509409 SASH3O75995 380 aa13.11□□□□□ -0.31
TPM3-219ENST00000509409 MAKP20794 623 aa13.11□□□□□ -0.31
TPM3-219ENST00000509409 LAP3P28838 519 aa13.11□□□□□ -0.31
TPM3-219ENST00000509409 PCBD1P61457 104 aa13.11□□□□□ -0.31
TPM3-219ENST00000509409 LCE2DQ5TA82 110 aaPredicted RBP13.11□□□□□ -0.31
TPM3-219ENST00000509409 FAM27BQ5VT28 67 aa13.11□□□□□ -0.31
TPM3-219ENST00000509409 OAFQ86UD1 273 aa13.11□□□□□ -0.31
TPM3-219ENST00000509409 CLDN22Q8N7P3 220 aa13.11□□□□□ -0.31
TPM3-219ENST00000509409 ABHD4Q8TB40 342 aa13.11□□□□□ -0.31
TPM3-219ENST00000509409 SLC25A40Q8TBP6 338 aa13.11□□□□□ -0.31
TPM3-219ENST00000509409 FNDC8Q8TC99 324 aa13.11□□□□□ -0.31
TPM3-219ENST00000509409 CCL17Q92583 94 aa13.11□□□□□ -0.31
TPM3-219ENST00000509409 RAB1CQ92928 201 aa13.11□□□□□ -0.31
TPM3-219ENST00000509409 RCN3Q96D15 328 aa13.11□□□□□ -0.31
TPM3-219ENST00000509409 RAB39BQ96DA2 213 aa13.11□□□□□ -0.31
TPM3-219ENST00000509409 ELMOD3Q96FG2 381 aa13.11□□□□□ -0.31
TPM3-219ENST00000509409 TIMD4Q96H15 378 aa13.11□□□□□ -0.31
TPM3-219ENST00000509409 WNT5BQ9H1J7 359 aa13.11□□□□□ -0.31
TPM3-219ENST00000509409 AP3M1Q9Y2T2 418 aa13.11□□□□□ -0.31
TPM3-219ENST00000509409 ANK2Q01484 3957 aa13.11□□□□□ -0.31
TPM3-219ENST00000509409 TRAV27A0A087WT01 109 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 A6NIZ1 184 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 EFCAB9A8MZ26 197 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 J3KTA2 159 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 MPZL1O95297 269 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 ZNF682O95780 498 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 IFNW1P05000 195 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 CST2P09228 141 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 MPV17P39210 176 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 WNT5AP41221 380 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 ARHGDIAP52565 204 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 RAP1BP61224 184 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 RAP1AP62834 184 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 TRAM2Q15035 370 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 FAM205BPQ63HN1 556 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 ARL9Q6T311 187 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 ZNF730Q6ZMV8 503 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 FKBP9P1Q75LS8 142 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 RRM2BQ7LG56 351 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 VTCN1Q7Z7D3 282 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 NRMQ8IXM6 262 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 ZNF101Q8IZC7 436 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 POU5F2Q8N7G0 328 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 KLF14Q8TD94 323 aaPredicted RBP13.1□□□□□ -0.31
TPM3-219ENST00000509409 IPCEF1Q8WWN9 437 aaPredicted RBP13.1□□□□□ -0.31
TPM3-219ENST00000509409 NMD3Q96D46 503 aaKnown RBP13.1□□□□□ -0.31
TPM3-219ENST00000509409 MARS2Q96GW9 593 aaKnown RBP13.1□□□□□ -0.31
TPM3-219ENST00000509409 OR2H1Q9GZK4 316 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 OR2J1Q9GZK6 312 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 EGLN1Q9GZT9 426 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 ELOVL3Q9HB03 270 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 CMTM6Q9NX76 183 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 ARMCX1Q9P291 453 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 WIPI2Q9Y4P8 454 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 CACNG2Q9Y698 323 aa13.1□□□□□ -0.31
TPM3-219ENST00000509409 A0A0A6YYJ9 748 aa13.09□□□□□ -0.31
TPM3-219ENST00000509409 PLPP2O43688 288 aa13.09□□□□□ -0.31
TPM3-219ENST00000509409 RGS9O75916 674 aaPredicted RBP13.09□□□□□ -0.31
TPM3-219ENST00000509409 VENTXO95231 258 aa13.09□□□□□ -0.31
TPM3-219ENST00000509409 PNPP00491 289 aa13.09□□□□□ -0.31
TPM3-219ENST00000509409 IGHV1-46P01743 117 aa13.09□□□□□ -0.31
TPM3-219ENST00000509409 IGHMP01871 453 aa13.09□□□□□ -0.31
TPM3-219ENST00000509409 RPL4P36578 427 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 199.4 ms