RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 POM121L2Q96KW2 1035 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 OR4F4Q96R69 305 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 PRR25Q96S07 402 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 ZNF184Q99676 751 aaPredicted RBP3.53□□□□□ -1.84
NEDD4-209ENST00000508871 DHRS9Q9BPW9 319 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 SYT15Q9BQS2 421 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 POLR2J2Q9GZM3 115 aaKnown RBP3.53□□□□□ -1.84
NEDD4-209ENST00000508871 POLR2J3Q9H1A7 115 aaKnown RBP3.53□□□□□ -1.84
NEDD4-209ENST00000508871 DUSP15Q9H1R2 295 aaPredicted RBP3.53□□□□□ -1.84
NEDD4-209ENST00000508871 SPAG4Q9NPE6 437 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 FAM49BQ9NUQ9 324 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 IL36GQ9NZH8 169 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 MMP17Q9ULZ9 603 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 TRBV4-1A0A0J9YWV2 114 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 RPS10-NUDT3A0A1W2PQS6 291 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 MPZL2O60487 215 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 HPGDSO60760 199 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 EFEMP2O95967 443 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 NUDT3O95989 172 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 HLA-HP01893 362 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 CRYAAP02489 173 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 SNRPBP14678 240 aaKnown RBP3.53□□□□□ -1.84
NEDD4-209ENST00000508871 USF1P22415 310 aaPredicted RBP3.53□□□□□ -1.84
NEDD4-209ENST00000508871 HOXA9P31269 272 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 RFC3P40938 356 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 NXPH1P58417 271 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 CDK16Q00536 496 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 MPPED2Q15777 294 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 OR2G6Q5TZ20 316 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 CYS1Q717R9 158 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 ADIPOR2Q86V24 386 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 WDFY1Q8IWB7 410 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 KIRREL3Q8IZU9 778 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 MCOLN3Q8TDD5 553 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 RNF133Q8WVZ7 376 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 TLCD1Q96CP7 247 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 OR2AG1Q9H205 316 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 SCML2Q9UQR0 700 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 TRAPPC4Q9Y296 219 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 ASB4Q9Y574 426 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 AP4S1Q9Y587 144 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 TIMM10BQ9Y5J6 103 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 A3GALT2U3KPV4 340 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 VWA8A3KMH1 1905 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 DENND4CQ5VZ89 1909 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 SCN1AP35498 2009 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 TOX3O15405 576 aaPredicted RBP3.53□□□□□ -1.84
NEDD4-209ENST00000508871 SRPX2O60687 465 aaPredicted RBP3.53□□□□□ -1.84
NEDD4-209ENST00000508871 SOX14O95416 240 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 HCKP08631 526 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 CDK4P11802 303 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 SRP9P49458 86 aaKnown RBP3.53□□□□□ -1.84
NEDD4-209ENST00000508871 SPCS3P61009 180 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 CXCR4P61073 352 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 ADARB1P78563 741 aaKnown RBP3.53□□□□□ -1.84
NEDD4-209ENST00000508871 NAAAQ02083 359 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 ADIGQ0VDE8 80 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 KLF10Q13118 480 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 TMEM44Q2T9K0 475 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 FCRLAQ7L513 359 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 MRPL21Q7Z2W9 205 aaKnown RBP3.53□□□□□ -1.84
NEDD4-209ENST00000508871 GID4Q8IVV7 300 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 LRRC75A-AS1Q8N1F1 130 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 LFNGQ8NES3 379 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 TMA16Q96EY4 203 aaKnown RBP3.53□□□□□ -1.84
NEDD4-209ENST00000508871 RNF157Q96PX1 679 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 OR51J1Q9H342 316 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 NLGN3Q9NZ94 848 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 SLC23A1Q9UHI7 598 aa3.53□□□□□ -1.84
NEDD4-209ENST00000508871 EIF3LQ9Y262 564 aaKnown RBP3.53□□□□□ -1.84
NEDD4-209ENST00000508871 MEIOCA2RUB1 952 aa3.53□□□□□ -1.85
NEDD4-209ENST00000508871 TARM1B6A8C7 271 aa3.53□□□□□ -1.85
NEDD4-209ENST00000508871 E5RJQ4 531 aa3.53□□□□□ -1.85
NEDD4-209ENST00000508871 E9PLN8 166 aa3.53□□□□□ -1.85
NEDD4-209ENST00000508871 IGLV3-25P01717 112 aa3.53□□□□□ -1.85
NEDD4-209ENST00000508871 IFI30P13284 250 aa3.53□□□□□ -1.85
NEDD4-209ENST00000508871 GP9P14770 177 aa3.53□□□□□ -1.85
NEDD4-209ENST00000508871 MYL9P24844 172 aa3.53□□□□□ -1.85
NEDD4-209ENST00000508871 PSMA1P25786 263 aaKnown RBP3.53□□□□□ -1.85
NEDD4-209ENST00000508871 IL12AP29459 219 aa3.53□□□□□ -1.85
NEDD4-209ENST00000508871 MIPP30301 263 aa3.53□□□□□ -1.85
NEDD4-209ENST00000508871 APOBEC3AP31941 199 aaPredicted RBP3.53□□□□□ -1.85
NEDD4-209ENST00000508871 MPIP34949 423 aa3.53□□□□□ -1.85
NEDD4-209ENST00000508871 XCR1P46094 333 aa3.53□□□□□ -1.85
NEDD4-209ENST00000508871 SULT1A1P50225 295 aa3.53□□□□□ -1.85
NEDD4-209ENST00000508871 FAM3AP98173 230 aa3.53□□□□□ -1.85
NEDD4-209ENST00000508871 EIF4EBP2Q13542 120 aaPredicted RBP3.53□□□□□ -1.85
NEDD4-209ENST00000508871 CLEC20AQ6ZU45 233 aa3.53□□□□□ -1.85
NEDD4-209ENST00000508871 IL17RELQ6ZVW7 336 aa3.53□□□□□ -1.85
NEDD4-209ENST00000508871 SLC26A11Q86WA9 606 aa3.53□□□□□ -1.85
NEDD4-209ENST00000508871 KYQ8NBH2 561 aa3.53□□□□□ -1.85
NEDD4-209ENST00000508871 OR2AP1Q8NGE2 309 aa3.53□□□□□ -1.85
NEDD4-209ENST00000508871 TERB2Q8NHR7 220 aa3.53□□□□□ -1.85
NEDD4-209ENST00000508871 SPATA22Q8NHS9 363 aa3.53□□□□□ -1.85
NEDD4-209ENST00000508871 NPRL2Q8WTW4 380 aa3.53□□□□□ -1.85
NEDD4-209ENST00000508871 RXFP2Q8WXD0 754 aa3.53□□□□□ -1.85
NEDD4-209ENST00000508871 MRGPRFQ96AM1 343 aa3.53□□□□□ -1.85
NEDD4-209ENST00000508871 SENP5Q96HI0 755 aaPredicted RBP3.53□□□□□ -1.85
NEDD4-209ENST00000508871 PGLYRP3Q96LB9 341 aa3.53□□□□□ -1.85
NEDD4-209ENST00000508871 PACRGQ96M98 296 aaPredicted RBP3.53□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms