RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 RAD23AP54725 363 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 RPS23P62266 143 aaKnown RBP7.96□□□□□ -1.14
NUP54-207ENST00000508583 LCN6P62502 163 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 NAAAQ02083 359 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 AQP6Q13520 282 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 TBC1D28Q2M2D7 210 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 SLC35F1Q5T1Q4 408 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 ZNF544Q6NX49 715 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 ARL9Q6T311 187 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 PTCHD4Q6ZW05 846 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 ZBTB46Q86UZ6 589 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 WDFY1Q8IWB7 410 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 SKA3Q8IX90 412 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 C1orf174Q8IYL3 243 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 HS3ST5Q8IZT8 346 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 LRRC18Q8N456 261 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 ZNF611Q8N823 705 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 NPEPL1Q8NDH3 523 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 ICA1LQ8NDH6 482 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 SDR9C7Q8NEX9 313 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 PROKR2Q8NFJ6 384 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 IPCEF1Q8WWN9 437 aaPredicted RBP7.96□□□□□ -1.14
NUP54-207ENST00000508583 AKAP1Q92667 903 aaKnown RBP eCLIP7.96□□□□□ -1.14
NUP54-207ENST00000508583 NMNAT3Q96T66 252 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 SH3GL3Q99963 347 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 C9orf16Q9BUW7 83 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 C1QTNF6Q9BXI9 259 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 PLA2G12AQ9BZM1 189 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 NUAK2Q9H093 628 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 CXorf56Q9H5V9 222 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 PLEKHF2Q9H8W4 249 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 S100A14Q9HCY8 104 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 RPRD1BQ9NQG5 326 aaKnown RBP7.96□□□□□ -1.14
NUP54-207ENST00000508583 C8orf4Q9NR00 106 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 POLE4Q9NR33 117 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 B3GNT2Q9NY97 397 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 REV1Q9UBZ9 1251 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 UGT2A1Q9Y4X1 527 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 TIMM10BQ9Y5J6 103 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 ITPR2Q14571 2701 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 ABCA12Q86UK0 2595 aa7.96□□□□□ -1.14
NUP54-207ENST00000508583 CADP27708 2225 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 CSMD2Q7Z408 3487 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 H3BNX3 289 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 ZNF823P16415 610 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 PRKACGP22612 351 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 LOXP28300 417 aaPredicted RBP7.95□□□□□ -1.14
NUP54-207ENST00000508583 CDAP32320 146 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 DAPP51397 102 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 CRISP1P54107 249 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 KRTAP10-9P60411 292 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 TUBA1BP68363 451 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 TUBA4AP68366 448 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 PIGFQ07326 219 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 GINS1Q14691 196 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 AGAP6Q5VW22 663 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 KDM4DQ6B0I6 523 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 TUBA1AQ71U36 451 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 FBXL14Q8N1E6 418 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 PQLC1Q8N2U9 271 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 SLC30A7Q8NEW0 376 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 NUP37Q8NFH4 326 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 KBTBD8Q8NFY9 601 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 OR8D4Q8NGM9 314 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 TMEM171Q8WVE6 324 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 NABP1Q96AH0 204 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 CCL19Q99731 98 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 DHRS9Q9BPW9 319 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 CDADC1Q9BWV3 514 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 SEMA6AQ9H2E6 1030 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 CDH20Q9HBT6 801 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 SLC25A19Q9HC21 320 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 CISD1Q9NZ45 108 aaKnown RBP7.95□□□□□ -1.14
NUP54-207ENST00000508583 ATPIF1Q9UII2 106 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 ST6GALNAC2Q9UJ37 374 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 NDRG4Q9ULP0 352 aaKnown RBP7.95□□□□□ -1.14
NUP54-207ENST00000508583 B9D1Q9UPM9 204 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 MOKQ9UQ07 419 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 COA3Q9Y2R0 106 aaPredicted RBP7.95□□□□□ -1.14
NUP54-207ENST00000508583 ATP23Q9Y6H3 246 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 ROS1P08922 2347 aa7.95□□□□□ -1.14
NUP54-207ENST00000508583 SPG11Q96JI7 2443 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 AKAP6Q13023 2319 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 PLCE1Q9P212 2302 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 IGLV1-36A0A0B4J1U3 117 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 IGKV1D-43A0A0B4J1Z2 117 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 IGHV2OR16-5A0A0B4J2B6 119 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 OR6C68A6NDL8 312 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 SAC3D1A6NKF1 404 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 SHISA9B4DS77 424 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 PRR23D1E9PI22 279 aaPredicted RBP7.94□□□□□ -1.14
NUP54-207ENST00000508583 SNAP29O95721 258 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 BAG2O95816 211 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 PRR23D2P0DMB1 279 aaPredicted RBP7.94□□□□□ -1.14
NUP54-207ENST00000508583 COX5BP10606 129 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 ZNF14P17017 642 aaPredicted RBP7.94□□□□□ -1.14
NUP54-207ENST00000508583 FMO3P31513 532 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 GDI2P50395 445 aaKnown RBP7.94□□□□□ -1.14
NUP54-207ENST00000508583 ALDH3A2P51648 485 aa7.94□□□□□ -1.14
NUP54-207ENST00000508583 SELENOVP59797 346 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms