RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 NRMQ8IXM6 262 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 CMTM1Q8IZ96 169 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 CLIP4Q8N3C7 705 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 ZNF561Q8N587 486 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 EID2Q8N6I1 236 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 GVQW1Q8N7I0 195 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 ARL14EPQ8N8R7 260 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 TEX45Q8NA69 505 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 OR2Y1Q8NGV0 311 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 OR11L1Q8NGX0 322 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 OR4Q3Q8NH05 313 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 OR5K2Q8NHB8 316 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 C8orf46Q8TAG6 207 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 ARRDC2Q8TBH0 407 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 SLC7A13Q8TCU3 470 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 BLOC1S5Q8TDH9 187 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 SAP25Q8TEE9 199 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 WFIKKN2Q8TEU8 576 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 TMEM174Q8WUU8 243 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 SKA2Q8WVK7 121 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 GTF3AQ92664 365 aaKnown RBP3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 BADQ92934 168 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 WBP2Q969T9 261 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 RPEQ96AT9 228 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 TLCD1Q96CP7 247 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 RCN3Q96D15 328 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 MED8Q96G25 268 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 PCED1BQ96HM7 432 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 HSFY1Q96LI6 401 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 KCTD7Q96MP8 289 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 RBP7Q96R05 134 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 CPXM1Q96SM3 734 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 TSNAXQ99598 290 aaKnown RBP3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 GPR21Q99679 349 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 CABLES2Q9BTV7 478 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 ZNF717Q9BY31 904 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 MMP28Q9H239 520 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 REEP4Q9H6H4 257 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 WDR41Q9HAD4 459 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 C3orf14Q9HBI5 128 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 SPANXCQ9NY87 97 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 B3GNT2Q9NY97 397 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 COMMD9Q9P000 198 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 PAK5Q9P286 719 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 FBXL3Q9UKT7 428 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 RPL36Q9Y3U8 105 aaKnown RBP3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 LSM5Q9Y4Y9 91 aaKnown RBP3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 HSPB11Q9Y547 144 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 CEMIPQ8WUJ3 1361 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 KIAA0232Q92628 1395 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 PLEKHG1Q9ULL1 1385 aa3.11□□□□□ -1.91
HMGB3P15-201ENST00000507326 MAPKBP1O60336 1514 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 KIR2DS1A0A191URI9 304 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 A0A1W2PPV9 198 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 ASPDHA6ND91 283 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 OR5K3A6NET4 321 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 VSTM2BA6NLU5 285 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 E9PAM4 449 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 E9PQ18 207 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 CCRL2O00421 344 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 TNFSF11O14788 317 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 UBDO15205 165 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 FABP7O15540 132 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 PPIHO43447 177 aaKnown RBP3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 NDUFA2O43678 99 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 ZIC3O60481 467 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 SRPX2O60687 465 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 SHOX2O60902 331 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 ENTPD6O75354 484 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 CRYZL1O95825 349 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 TSPAN13O95857 204 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 IGSF6O95976 241 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 IGHG3P01860 377 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 GAPDHP04406 335 aaKnown RBP3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 GUSBP08236 651 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 HOXC6P09630 235 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 COX4I1P13073 169 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 MYL12AP19105 171 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 TBPP20226 339 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 FUT3P21217 361 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 SLC2A5P22732 501 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 EDNRAP25101 427 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 PSMA1P25786 263 aaKnown RBP3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 GDF1P27539 372 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 SSTR2P30874 369 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 COILP38432 576 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 LEPP41159 167 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 TSFMP43897 325 aaKnown RBP3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 RAG2P55895 527 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 TMPRSS3P57727 454 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 TCTAP57738 103 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 RAB2AP61019 212 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 HERV-K104P61576 105 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 STXBP1P61764 594 aaKnown RBP3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 RPL36AP83881 106 aaKnown RBP3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 PRKCDQ05655 676 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 BCL2L1Q07817 233 aa3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 MLLT11Q13015 90 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P15-201ENST00000507326 ASAH1Q13510 395 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms