RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 NEDD4LQ96PU5 975 aa15.44■□□□□ 0.06
TRAPPC11-204ENST00000505676 AMELYQ99218 206 aa15.44■□□□□ 0.06
TRAPPC11-204ENST00000505676 PIGQQ9BRB3 760 aa15.44■□□□□ 0.06
TRAPPC11-204ENST00000505676 SPRY4Q9C004 299 aa15.44■□□□□ 0.06
TRAPPC11-204ENST00000505676 B3GNT4Q9C0J1 378 aa15.44■□□□□ 0.06
TRAPPC11-204ENST00000505676 COPZ2Q9P299 210 aa15.44■□□□□ 0.06
TRAPPC11-204ENST00000505676 CKLFQ9UBR5 152 aa15.44■□□□□ 0.06
TRAPPC11-204ENST00000505676 DKKL1Q9UK85 242 aa15.44■□□□□ 0.06
TRAPPC11-204ENST00000505676 LRP12Q9Y561 859 aa15.44■□□□□ 0.06
TRAPPC11-204ENST00000505676 CCDC187A0A096LP49 1063 aa15.44■□□□□ 0.06
TRAPPC11-204ENST00000505676 MEIOCA2RUB1 952 aa15.44■□□□□ 0.06
TRAPPC11-204ENST00000505676 SULT2B1O00204 365 aa15.44■□□□□ 0.06
TRAPPC11-204ENST00000505676 TRAF3IP2O43734 574 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC11-204ENST00000505676 CD59P13987 128 aa15.44■□□□□ 0.06
TRAPPC11-204ENST00000505676 ZNF43P17038 809 aa15.44■□□□□ 0.06
TRAPPC11-204ENST00000505676 TCN2P20062 427 aa15.44■□□□□ 0.06
TRAPPC11-204ENST00000505676 ACHEP22303 614 aa15.44■□□□□ 0.06
TRAPPC11-204ENST00000505676 CAPZA1P52907 286 aa15.44■□□□□ 0.06
TRAPPC11-204ENST00000505676 JMJD6Q6NYC1 403 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC11-204ENST00000505676 KDM8Q8N371 416 aa15.44■□□□□ 0.06
TRAPPC11-204ENST00000505676 OR5H6Q8NGV6 325 aa15.44■□□□□ 0.06
TRAPPC11-204ENST00000505676 RNF133Q8WVZ7 376 aa15.44■□□□□ 0.06
TRAPPC11-204ENST00000505676 TSEN15Q8WW01 171 aaKnown RBP15.44■□□□□ 0.06
TRAPPC11-204ENST00000505676 CREB3L1Q96BA8 519 aa15.44■□□□□ 0.06
TRAPPC11-204ENST00000505676 MOB1AQ9H8S9 216 aa15.44■□□□□ 0.06
TRAPPC11-204ENST00000505676 ZNF275Q9NSD4 429 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC11-204ENST00000505676 MEGF11A6BM72 1044 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 HMX3A6NHT5 357 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 ORC5O43913 435 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 GPANK1O95872 356 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 UBCP0CG48 685 aaKnown RBP15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 PGA4P0DJD7 388 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 PGA3P0DJD8 388 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 HLA-DMAP28067 261 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 KIR2DL3P43628 341 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 CLDN20P56880 219 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 ETFDHQ16134 617 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 TMEM176BQ3YBM2 270 aaPredicted RBP15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 TMEM244Q5VVB8 128 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 LRRC69Q6ZNQ3 347 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 ZNF433Q8N7K0 673 aaPredicted RBP15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 ST7LQ8TDW4 575 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 S100A16Q96FQ6 103 aaKnown RBP15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 MOV10Q9HCE1 1003 aaKnown RBP15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 MED29Q9NX70 200 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 DHDHQ9UQ10 334 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 MRPS18CQ9Y3D5 142 aaKnown RBP15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 PCNX3Q9H6A9 2034 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 TEX51A0A1B0GUA7 166 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 LINC00854A0A1B0GVQ3 168 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 P04436 131 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 CELA2AP08217 269 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 FAM157BP0CG42 384 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 CCL3P10147 92 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 PSKH1P11801 424 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 MMP16P51512 607 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 KCNMB1Q16558 191 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 KCNE4Q8WWG9 221 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 DEDD2Q8WXF8 326 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 GFI1Q99684 422 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 MARVELD1Q9BSK0 173 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 SLC25A18Q9H1K4 315 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 C1orf198Q9H425 327 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 PLEKHA1Q9HB21 404 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 SLC17A5Q9NRA2 495 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 STEAP1Q9UHE8 339 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 HHLA2Q9UM44 414 aa15.43■□□□□ 0.06
TRAPPC11-204ENST00000505676 ZNF726A6NNF4 738 aa15.42■□□□□ 0.06
TRAPPC11-204ENST00000505676 SHISA8B8ZZ34 492 aa15.42■□□□□ 0.06
TRAPPC11-204ENST00000505676 CDK2AP1O14519 115 aa15.42■□□□□ 0.06
TRAPPC11-204ENST00000505676 SRSF10O75494 262 aaKnown RBP15.42■□□□□ 0.06
TRAPPC11-204ENST00000505676 SRD5A2P31213 254 aa15.42■□□□□ 0.06
TRAPPC11-204ENST00000505676 AP3S2P59780 193 aa15.42■□□□□ 0.06
TRAPPC11-204ENST00000505676 BTG1P62324 171 aa15.42■□□□□ 0.06
TRAPPC11-204ENST00000505676 RAC1P63000 192 aa15.42■□□□□ 0.06
TRAPPC11-204ENST00000505676 DYRK1AQ13627 763 aa15.42■□□□□ 0.06
TRAPPC11-204ENST00000505676 TOMM20Q15388 145 aa15.42■□□□□ 0.06
TRAPPC11-204ENST00000505676 SPATC1Q76KD6 591 aa15.42■□□□□ 0.06
TRAPPC11-204ENST00000505676 DCXRQ7Z4W1 244 aa15.42■□□□□ 0.06
TRAPPC11-204ENST00000505676 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.42■□□□□ 0.06
TRAPPC11-204ENST00000505676 SMIM4Q8WVI0 70 aa15.42■□□□□ 0.06
TRAPPC11-204ENST00000505676 ABHD1Q96SE0 405 aa15.42■□□□□ 0.06
TRAPPC11-204ENST00000505676 LIN7BQ9HAP6 207 aa15.42■□□□□ 0.06
TRAPPC11-204ENST00000505676 CCNKO75909 580 aa15.41■□□□□ 0.06
TRAPPC11-204ENST00000505676 ECDO95905 644 aaPredicted RBP15.41■□□□□ 0.06
TRAPPC11-204ENST00000505676 H2BFMP0C1H6 154 aa15.41■□□□□ 0.06
TRAPPC11-204ENST00000505676 ZNF806P0C7X5 589 aa15.41■□□□□ 0.06
TRAPPC11-204ENST00000505676 SLC6A1P30531 599 aa15.41■□□□□ 0.06
TRAPPC11-204ENST00000505676 OTX2P32243 289 aa15.41■□□□□ 0.06
TRAPPC11-204ENST00000505676 RPS27P42677 84 aaKnown RBP15.41■□□□□ 0.06
TRAPPC11-204ENST00000505676 SOX2P48431 317 aa15.41■□□□□ 0.06
TRAPPC11-204ENST00000505676 ART1P52961 327 aa15.41■□□□□ 0.06
TRAPPC11-204ENST00000505676 H3F3AP84243 136 aa15.41■□□□□ 0.06
TRAPPC11-204ENST00000505676 HIST3H3Q16695 136 aa15.41■□□□□ 0.06
TRAPPC11-204ENST00000505676 OR7E24Q6IFN5 339 aa15.41■□□□□ 0.06
TRAPPC11-204ENST00000505676 SLC25A47Q6Q0C1 308 aa15.41■□□□□ 0.06
TRAPPC11-204ENST00000505676 KLHL24Q6TFL4 600 aa15.41■□□□□ 0.06
TRAPPC11-204ENST00000505676 ASB18Q6ZVZ8 466 aa15.41■□□□□ 0.06
TRAPPC11-204ENST00000505676 ZBTB8BQ8NAP8 495 aaPredicted RBP15.41■□□□□ 0.06
TRAPPC11-204ENST00000505676 INTS12Q96CB8 462 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms