RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 GTPBP2Q9BX10 602 aaKnown RBP10.42□□□□□ -0.74
USP46-204ENST00000503060 OR11A1Q9GZK7 315 aa10.42□□□□□ -0.74
USP46-204ENST00000503060 ZFP57Q9NU63 452 aa10.42□□□□□ -0.74
USP46-204ENST00000503060 ADAM30Q9UKF2 790 aa10.42□□□□□ -0.74
USP46-204ENST00000503060 EXPH5Q8NEV8 1989 aa10.42□□□□□ -0.74
USP46-204ENST00000503060 TRBV2A0A0J9YWF9 115 aa10.42□□□□□ -0.74
USP46-204ENST00000503060 PRR32B1ATL7 298 aa10.42□□□□□ -0.74
USP46-204ENST00000503060 ARHGEF9O43307 516 aa10.42□□□□□ -0.74
USP46-204ENST00000503060 SSX4O60224 188 aa10.42□□□□□ -0.74
USP46-204ENST00000503060 SLC19A2O60779 497 aa10.42□□□□□ -0.74
USP46-204ENST00000503060 DXOO77932 396 aaKnown RBP10.42□□□□□ -0.74
USP46-204ENST00000503060 FABP1P07148 127 aa10.42□□□□□ -0.74
USP46-204ENST00000503060 CSF3P09919 207 aa10.42□□□□□ -0.74
USP46-204ENST00000503060 CTSSP25774 331 aa10.42□□□□□ -0.74
USP46-204ENST00000503060 SUMO3P55854 103 aaPredicted RBP10.42□□□□□ -0.74
USP46-204ENST00000503060 SCN1BQ07699 218 aa10.42□□□□□ -0.74
USP46-204ENST00000503060 SNTA1Q13424 505 aa10.42□□□□□ -0.74
USP46-204ENST00000503060 MADCAM1Q13477 382 aa10.42□□□□□ -0.74
USP46-204ENST00000503060 ATPAF1Q5TC12 328 aaPredicted RBP10.42□□□□□ -0.74
USP46-204ENST00000503060 C5orf46Q6UWT4 87 aa10.42□□□□□ -0.74
USP46-204ENST00000503060 DCXRQ7Z4W1 244 aa10.42□□□□□ -0.74
USP46-204ENST00000503060 OR6V1Q8N148 313 aa10.42□□□□□ -0.74
USP46-204ENST00000503060 BMPERQ8N8U9 685 aa10.42□□□□□ -0.74
USP46-204ENST00000503060 AKAP1Q92667 903 aaKnown RBP eCLIP10.42□□□□□ -0.74
USP46-204ENST00000503060 MARC2Q969Z3 335 aa10.42□□□□□ -0.74
USP46-204ENST00000503060 OR51B6Q9H340 312 aa10.42□□□□□ -0.74
USP46-204ENST00000503060 GALNT9Q9HCQ5 603 aa10.42□□□□□ -0.74
USP46-204ENST00000503060 PCNX3Q9H6A9 2034 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 A0A0G2JK05 382 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 TVP23AA6NH52 213 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 B4DXG7 233 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 TERTO14746 1132 aaKnown RBP10.41□□□□□ -0.74
USP46-204ENST00000503060 IGHEP01854 428 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 ZNF28P17035 718 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 APEX1P27695 318 aaKnown RBP10.41□□□□□ -0.74
USP46-204ENST00000503060 OR10A3P58181 314 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 RPS11P62280 158 aaKnown RBP eCLIP10.41□□□□□ -0.74
USP46-204ENST00000503060 SFXN4Q6P4A7 337 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 LYPD8Q6UX82 237 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.41□□□□□ -0.74
USP46-204ENST00000503060 CDC20BQ86Y33 519 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 RPS4Y2Q8TD47 263 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 KCTD12Q96CX2 325 aaKnown RBP10.41□□□□□ -0.74
USP46-204ENST00000503060 TTYH2Q9BSA4 534 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 SYT4Q9H2B2 425 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 PPP1R3EQ9H7J1 279 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 WDR54Q9H977 334 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 NUP50Q9UKX7 468 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 KLHDC2Q9Y2U9 406 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 TRAV1-2A0A0B4J238 106 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 XKRYO14609 159 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 SEC14L5O43304 696 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 OR2T1O43869 369 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 SYPP08247 313 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 THBS2P35442 1172 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 RPL27P61353 136 aaKnown RBP10.41□□□□□ -0.74
USP46-204ENST00000503060 ZFP36L1Q07352 338 aaKnown RBP10.41□□□□□ -0.74
USP46-204ENST00000503060 TAB1Q15750 504 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 ACKR1Q16570 336 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 YIF1BQ5BJH7 314 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 NRARPQ7Z6K4 114 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 NPAS1Q99742 590 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 MED11Q9P086 117 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 MYOTQ9UBF9 498 aa10.41□□□□□ -0.74
USP46-204ENST00000503060 NXT1Q9UKK6 140 aaKnown RBP10.41□□□□□ -0.74
USP46-204ENST00000503060 FTCDNL1E5RQL4 147 aa10.4□□□□□ -0.74
USP46-204ENST00000503060 PLPP3O14495 311 aa10.4□□□□□ -0.74
USP46-204ENST00000503060 GATBO75879 557 aaKnown RBP10.4□□□□□ -0.74
USP46-204ENST00000503060 OR6A2O95222 327 aa10.4□□□□□ -0.74
USP46-204ENST00000503060 APOC1P02654 83 aa10.4□□□□□ -0.74
USP46-204ENST00000503060 UCHL1P09936 223 aa10.4□□□□□ -0.74
USP46-204ENST00000503060 RFX2P48378 723 aa10.4□□□□□ -0.74
USP46-204ENST00000503060 RIDAP52758 137 aaKnown RBP10.4□□□□□ -0.74
USP46-204ENST00000503060 DLX5P56178 289 aa10.4□□□□□ -0.74
USP46-204ENST00000503060 CD300CQ08708 224 aa10.4□□□□□ -0.74
USP46-204ENST00000503060 ASAH1Q13510 395 aa10.4□□□□□ -0.74
USP46-204ENST00000503060 P2RY14Q15391 338 aa10.4□□□□□ -0.74
USP46-204ENST00000503060 PLA1AQ53H76 456 aa10.4□□□□□ -0.74
USP46-204ENST00000503060 FAM69BQ5VUD6 431 aa10.4□□□□□ -0.74
USP46-204ENST00000503060 BICRALQ6AI39 1079 aa10.4□□□□□ -0.74
USP46-204ENST00000503060 FAM199XQ6PEV8 388 aaPredicted RBP10.4□□□□□ -0.74
USP46-204ENST00000503060 C1orf162Q8NEQ5 155 aaPredicted RBP10.4□□□□□ -0.74
USP46-204ENST00000503060 ZNF417Q8TAU3 575 aa10.4□□□□□ -0.74
USP46-204ENST00000503060 ZNF519Q8TB69 540 aa10.4□□□□□ -0.74
USP46-204ENST00000503060 RNF166Q96A37 237 aaPredicted RBP10.4□□□□□ -0.74
USP46-204ENST00000503060 SNX18Q96RF0 628 aa10.4□□□□□ -0.74
USP46-204ENST00000503060 ZNF587Q96SQ5 575 aaPredicted RBP10.4□□□□□ -0.74
USP46-204ENST00000503060 PDCD1LG2Q9BQ51 273 aa10.4□□□□□ -0.74
USP46-204ENST00000503060 TXNIPQ9H3M7 391 aa10.4□□□□□ -0.74
USP46-204ENST00000503060 KLRF1Q9NZS2 232 aa10.4□□□□□ -0.74
USP46-204ENST00000503060 GPN3Q9UHW5 284 aaPredicted RBP10.4□□□□□ -0.74
USP46-204ENST00000503060 RASD1Q9Y272 281 aa10.4□□□□□ -0.74
USP46-204ENST00000503060 FAM25AB3EWG3 89 aa10.39□□□□□ -0.75
USP46-204ENST00000503060 FAM25CB3EWG5 89 aa10.39□□□□□ -0.75
USP46-204ENST00000503060 FAM25GB3EWG6 89 aa10.39□□□□□ -0.75
USP46-204ENST00000503060 ARL6IP5O75915 188 aa10.39□□□□□ -0.75
USP46-204ENST00000503060 OR2J2O76002 312 aa10.39□□□□□ -0.75
USP46-204ENST00000503060 AKR7A3O95154 331 aa10.39□□□□□ -0.75
USP46-204ENST00000503060 IGHMP01871 453 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms