RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 SLC22A23A1A5C7 686 aa14.21□□□□□ -0.13
SF3A1-209ENST00000496189 ZNF503-AS2A6NEH8 195 aa14.21□□□□□ -0.13
SF3A1-209ENST00000496189 ARPC3O15145 178 aa14.21□□□□□ -0.13
SF3A1-209ENST00000496189 PPP1R3DO95685 299 aa14.21□□□□□ -0.13
SF3A1-209ENST00000496189 TXNDC12O95881 172 aa14.21□□□□□ -0.13
SF3A1-209ENST00000496189 SERPINA5P05154 406 aa14.21□□□□□ -0.13
SF3A1-209ENST00000496189 CELA3BP08861 270 aa14.21□□□□□ -0.13
SF3A1-209ENST00000496189 FXYD6P3P58550 94 aa14.21□□□□□ -0.13
SF3A1-209ENST00000496189 RAB39AQ14964 217 aa14.21□□□□□ -0.13
SF3A1-209ENST00000496189 RAB35Q15286 201 aa14.21□□□□□ -0.13
SF3A1-209ENST00000496189 SLC25A47Q6Q0C1 308 aa14.21□□□□□ -0.13
SF3A1-209ENST00000496189 B3GLCTQ6Y288 498 aa14.21□□□□□ -0.13
SF3A1-209ENST00000496189 TMEM179BQ7Z7N9 219 aa14.21□□□□□ -0.13
SF3A1-209ENST00000496189 SVOPLQ8N434 492 aa14.21□□□□□ -0.13
SF3A1-209ENST00000496189 TEX47Q8TBZ9 253 aa14.21□□□□□ -0.13
SF3A1-209ENST00000496189 IGFBPL1Q8WX77 278 aa14.21□□□□□ -0.13
SF3A1-209ENST00000496189 LRTOMTQ8WZ04 291 aa14.21□□□□□ -0.13
SF3A1-209ENST00000496189 STMN2Q93045 179 aa14.21□□□□□ -0.13
SF3A1-209ENST00000496189 FBXO17Q96EF6 278 aa14.21□□□□□ -0.13
SF3A1-209ENST00000496189 CACNG6Q9BXT2 260 aa14.21□□□□□ -0.13
SF3A1-209ENST00000496189 EGLN3Q9H6Z9 239 aa14.21□□□□□ -0.13
SF3A1-209ENST00000496189 CDH20Q9HBT6 801 aa14.21□□□□□ -0.13
SF3A1-209ENST00000496189 ROS1P08922 2347 aa14.21□□□□□ -0.13
SF3A1-209ENST00000496189 PRSS37A4D1T9 235 aa14.2□□□□□ -0.14
SF3A1-209ENST00000496189 H3BN98 237 aa14.2□□□□□ -0.14
SF3A1-209ENST00000496189 OVOL3O00110 214 aa14.2□□□□□ -0.14
SF3A1-209ENST00000496189 SOCS2O14508 198 aa14.2□□□□□ -0.14
SF3A1-209ENST00000496189 ERCC1P07992 297 aaPredicted RBP14.2□□□□□ -0.14
SF3A1-209ENST00000496189 ZNF14P17017 642 aaPredicted RBP14.2□□□□□ -0.14
SF3A1-209ENST00000496189 ZNF23P17027 643 aa14.2□□□□□ -0.14
SF3A1-209ENST00000496189 CALCRP30988 508 aa14.2□□□□□ -0.14
SF3A1-209ENST00000496189 CDAP32320 146 aa14.2□□□□□ -0.14
SF3A1-209ENST00000496189 APLNRP35414 380 aa14.2□□□□□ -0.14
SF3A1-209ENST00000496189 SERPINF1P36955 418 aa14.2□□□□□ -0.14
SF3A1-209ENST00000496189 SNTB2Q13425 540 aaKnown RBP14.2□□□□□ -0.14
SF3A1-209ENST00000496189 TBC1D28Q2M2D7 210 aa14.2□□□□□ -0.14
SF3A1-209ENST00000496189 CLEC12AQ5QGZ9 265 aa14.2□□□□□ -0.14
SF3A1-209ENST00000496189 UNQ6126/PRO20091Q6UXV3 157 aa14.2□□□□□ -0.14
SF3A1-209ENST00000496189 ALDH16A1Q8IZ83 802 aa14.2□□□□□ -0.14
SF3A1-209ENST00000496189 WFDC11Q8NEX6 87 aa14.2□□□□□ -0.14
SF3A1-209ENST00000496189 OR2T33Q8NG76 320 aa14.2□□□□□ -0.14
SF3A1-209ENST00000496189 NIPSNAP1Q9BPW8 284 aa14.2□□□□□ -0.14
SF3A1-209ENST00000496189 TSSK6Q9BXA6 273 aa14.2□□□□□ -0.14
SF3A1-209ENST00000496189 TEX12Q9BXU0 123 aa14.2□□□□□ -0.14
SF3A1-209ENST00000496189 RERGLQ9H628 205 aa14.2□□□□□ -0.14
SF3A1-209ENST00000496189 ZNF442Q9H7R0 627 aa14.2□□□□□ -0.14
SF3A1-209ENST00000496189 NOX3Q9HBY0 568 aa14.2□□□□□ -0.14
SF3A1-209ENST00000496189 CADP27708 2225 aa14.19□□□□□ -0.14
SF3A1-209ENST00000496189 C12orf71A8MTZ7 269 aa14.19□□□□□ -0.14
SF3A1-209ENST00000496189 B9A039 149 aa14.19□□□□□ -0.14
SF3A1-209ENST00000496189 H7C1C5 153 aa14.19□□□□□ -0.14
SF3A1-209ENST00000496189 RENP00797 406 aa14.19□□□□□ -0.14
SF3A1-209ENST00000496189 PATE4P0C8F1 98 aa14.19□□□□□ -0.14
SF3A1-209ENST00000496189 MSR1P21757 451 aa14.19□□□□□ -0.14
SF3A1-209ENST00000496189 PRKACGP22612 351 aa14.19□□□□□ -0.14
SF3A1-209ENST00000496189 CRABP1P29762 137 aa14.19□□□□□ -0.14
SF3A1-209ENST00000496189 LCN6P62502 163 aa14.19□□□□□ -0.14
SF3A1-209ENST00000496189 MESTQ5EB52 335 aa14.19□□□□□ -0.14
SF3A1-209ENST00000496189 FAM27BQ5VT28 67 aa14.19□□□□□ -0.14
SF3A1-209ENST00000496189 KRT80Q6KB66 452 aa14.19□□□□□ -0.14
SF3A1-209ENST00000496189 AMIGO2Q86SJ2 522 aa14.19□□□□□ -0.14
SF3A1-209ENST00000496189 HS3ST5Q8IZT8 346 aa14.19□□□□□ -0.14
SF3A1-209ENST00000496189 SLC30A7Q8NEW0 376 aa14.19□□□□□ -0.14
SF3A1-209ENST00000496189 RASD2Q96D21 266 aa14.19□□□□□ -0.14
SF3A1-209ENST00000496189 MS4A3Q96HJ5 214 aa14.19□□□□□ -0.14
SF3A1-209ENST00000496189 Q96MF0 132 aa14.19□□□□□ -0.14
SF3A1-209ENST00000496189 SNX18Q96RF0 628 aa14.19□□□□□ -0.14
SF3A1-209ENST00000496189 WACQ9BTA9 647 aa14.19□□□□□ -0.14
SF3A1-209ENST00000496189 OSBPL10Q9BXB5 764 aa14.19□□□□□ -0.14
SF3A1-209ENST00000496189 ZNF224Q9NZL3 707 aa14.19□□□□□ -0.14
SF3A1-209ENST00000496189 ENOPH1Q9UHY7 261 aa14.19□□□□□ -0.14
SF3A1-209ENST00000496189 CMAHPQ9Y471 501 aa14.19□□□□□ -0.14
SF3A1-209ENST00000496189 ALPK2Q86TB3 2170 aa14.18□□□□□ -0.14
SF3A1-209ENST00000496189 SLC16A7O60669 478 aa14.18□□□□□ -0.14
SF3A1-209ENST00000496189 KHDRBS3O75525 346 aaKnown RBP14.18□□□□□ -0.14
SF3A1-209ENST00000496189 SOX14O95416 240 aa14.18□□□□□ -0.14
SF3A1-209ENST00000496189 IFNGP01579 166 aa14.18□□□□□ -0.14
SF3A1-209ENST00000496189 CD8AP01732 235 aa14.18□□□□□ -0.14
SF3A1-209ENST00000496189 CST2P09228 141 aa14.18□□□□□ -0.14
SF3A1-209ENST00000496189 OR4A8P0C604 315 aa14.18□□□□□ -0.14
SF3A1-209ENST00000496189 OSMP13725 252 aa14.18□□□□□ -0.14
SF3A1-209ENST00000496189 FOSL1P15407 271 aa14.18□□□□□ -0.14
SF3A1-209ENST00000496189 NR4A1P22736 598 aa14.18□□□□□ -0.14
SF3A1-209ENST00000496189 CENPAP49450 140 aa14.18□□□□□ -0.14
SF3A1-209ENST00000496189 NUDT6P53370 316 aa14.18□□□□□ -0.14
SF3A1-209ENST00000496189 SELENOVP59797 346 aa14.18□□□□□ -0.14
SF3A1-209ENST00000496189 MYPOPQ86VE0 399 aaPredicted RBP14.18□□□□□ -0.14
SF3A1-209ENST00000496189 HTRA1Q92743 480 aa14.18□□□□□ -0.14
SF3A1-209ENST00000496189 NMD3Q96D46 503 aaKnown RBP14.18□□□□□ -0.14
SF3A1-209ENST00000496189 TMUB1Q9BVT8 246 aa14.18□□□□□ -0.14
SF3A1-209ENST00000496189 SYT4Q9H2B2 425 aa14.18□□□□□ -0.14
SF3A1-209ENST00000496189 PLK3Q9H4B4 646 aa14.18□□□□□ -0.14
SF3A1-209ENST00000496189 S100A14Q9HCY8 104 aa14.18□□□□□ -0.14
SF3A1-209ENST00000496189 PAPOLBQ9NRJ5 636 aaKnown RBP14.18□□□□□ -0.14
SF3A1-209ENST00000496189 VSX1Q9NZR4 365 aaPredicted RBP14.18□□□□□ -0.14
SF3A1-209ENST00000496189 TIMM10BQ9Y5J6 103 aa14.18□□□□□ -0.14
SF3A1-209ENST00000496189 FKBP7Q9Y680 259 aa14.18□□□□□ -0.14
SF3A1-209ENST00000496189 IGKV1D-43A0A0B4J1Z2 117 aa14.17□□□□□ -0.14
SF3A1-209ENST00000496189 H7C417 338 aa14.17□□□□□ -0.14
SF3A1-209ENST00000496189 POU1F1P28069 291 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms