RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 UBL3O95164 117 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 CD79AP11912 226 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 VHLP40337 213 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 BLVRAP53004 296 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 AQP4P55087 323 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 SLC36A2Q495M3 483 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 C1QTNF12Q5T7M4 302 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 SP5Q6BEB4 398 aaPredicted RBP12.73□□□□□ -0.37
BRCA1-223ENST00000494123 SKA3Q8IX90 412 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 WDR31Q8NA23 367 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 TRUB1Q8WWH5 349 aaKnown RBP12.73□□□□□ -0.37
BRCA1-223ENST00000494123 SPOCK3Q9BQ16 436 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 ADI1Q9BV57 179 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 RNF121Q9H920 327 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 EMC7Q9NPA0 242 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 CCNB1IP1Q9NPC3 277 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 NGBQ9NPG2 151 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 PLEKHB1Q9UF11 243 aaPredicted RBP12.73□□□□□ -0.37
BRCA1-223ENST00000494123 MOKQ9UQ07 419 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 POLR1DQ9Y2S0 133 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 ANKHD1Q8IWZ3 2542 aaKnown RBP12.73□□□□□ -0.37
BRCA1-223ENST00000494123 H0YJX3 145 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 MPZL1O95297 269 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 GPANK1O95872 356 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 HLA-HP01893 362 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 COX6B1P14854 86 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 ZNF823P16415 610 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 FMO3P31513 532 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 HSF2Q03933 536 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 PIGFQ07326 219 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 GSG1Q2KHT4 349 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 FAM27BQ5VT28 67 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 NXNL2Q5VZ03 156 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 IZUMO2Q6UXV1 221 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 C22orf34Q6ZV56 151 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 DPPA2Q7Z7J5 298 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 BBS1Q8NFJ9 593 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 SLC26A10Q8NG04 563 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 FAM222BQ8WU58 562 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 C11orf40Q8WZ69 217 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 MOV10Q9HCE1 1003 aaKnown RBP12.73□□□□□ -0.37
BRCA1-223ENST00000494123 SLC25A15Q9Y619 301 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 ICE1Q9Y2F5 2266 aa12.73□□□□□ -0.37
BRCA1-223ENST00000494123 TVP23AA6NH52 213 aa12.72□□□□□ -0.37
BRCA1-223ENST00000494123 C12orf71A8MTZ7 269 aa12.72□□□□□ -0.37
BRCA1-223ENST00000494123 E9PQ18 207 aa12.72□□□□□ -0.37
BRCA1-223ENST00000494123 MPZL2O60487 215 aa12.72□□□□□ -0.37
BRCA1-223ENST00000494123 GLCEO94923 617 aa12.72□□□□□ -0.37
BRCA1-223ENST00000494123 RAB36O95755 333 aa12.72□□□□□ -0.37
BRCA1-223ENST00000494123 THBDP07204 575 aa12.72□□□□□ -0.37
BRCA1-223ENST00000494123 CST2P09228 141 aa12.72□□□□□ -0.37
BRCA1-223ENST00000494123 GAAP10253 952 aa12.72□□□□□ -0.37
BRCA1-223ENST00000494123 EPXP11678 715 aa12.72□□□□□ -0.37
BRCA1-223ENST00000494123 PAX7P23759 505 aa12.72□□□□□ -0.37
BRCA1-223ENST00000494123 CAPGP40121 348 aa12.72□□□□□ -0.37
BRCA1-223ENST00000494123 EFNB1P98172 346 aa12.72□□□□□ -0.37
BRCA1-223ENST00000494123 TEKQ02763 1124 aa12.72□□□□□ -0.37
BRCA1-223ENST00000494123 APOFQ13790 326 aa12.72□□□□□ -0.37
BRCA1-223ENST00000494123 SNCBQ16143 134 aa12.72□□□□□ -0.37
BRCA1-223ENST00000494123 MEP1BQ16820 701 aa12.72□□□□□ -0.37
BRCA1-223ENST00000494123 SLC35D3Q5M8T2 416 aa12.72□□□□□ -0.37
BRCA1-223ENST00000494123 LCN1P1Q5VSP4 162 aa12.72□□□□□ -0.37
BRCA1-223ENST00000494123 TMEM53Q6P2H8 277 aa12.72□□□□□ -0.37
BRCA1-223ENST00000494123 UGT2A3Q6UWM9 527 aa12.72□□□□□ -0.37
BRCA1-223ENST00000494123 BCDIN3DQ7Z5W3 292 aaKnown RBP12.72□□□□□ -0.37
BRCA1-223ENST00000494123 GID4Q8IVV7 300 aa12.72□□□□□ -0.37
BRCA1-223ENST00000494123 SETD9Q8NE22 299 aa12.72□□□□□ -0.37
BRCA1-223ENST00000494123 ZNRF4Q8WWF5 429 aa12.72□□□□□ -0.37
BRCA1-223ENST00000494123 ZNF416Q9BWM5 594 aa12.72□□□□□ -0.37
BRCA1-223ENST00000494123 CDADC1Q9BWV3 514 aa12.72□□□□□ -0.37
BRCA1-223ENST00000494123 C1QTNF6Q9BXI9 259 aa12.72□□□□□ -0.37
BRCA1-223ENST00000494123 RASSF1Q9NS23 344 aa12.72□□□□□ -0.37
BRCA1-223ENST00000494123 UTP20O75691 2785 aaKnown RBP12.72□□□□□ -0.37
BRCA1-223ENST00000494123 H0YAE9 185 aa12.71□□□□□ -0.37
BRCA1-223ENST00000494123 HRGP04196 525 aa12.71□□□□□ -0.37
BRCA1-223ENST00000494123 SCG5P05408 212 aa12.71□□□□□ -0.37
BRCA1-223ENST00000494123 PATE4P0C8F1 98 aa12.71□□□□□ -0.37
BRCA1-223ENST00000494123 ARR3P36575 388 aa12.71□□□□□ -0.37
BRCA1-223ENST00000494123 HSPA13P48723 471 aa12.71□□□□□ -0.37
BRCA1-223ENST00000494123 ZNF83P51522 516 aa12.71□□□□□ -0.37
BRCA1-223ENST00000494123 PCBD1P61457 104 aa12.71□□□□□ -0.37
BRCA1-223ENST00000494123 LSM6P62312 80 aaKnown RBP12.71□□□□□ -0.37
BRCA1-223ENST00000494123 RAB1AP62820 205 aa12.71□□□□□ -0.37
BRCA1-223ENST00000494123 ADAM8P78325 824 aa12.71□□□□□ -0.37
BRCA1-223ENST00000494123 ADARB1P78563 741 aaKnown RBP12.71□□□□□ -0.37
BRCA1-223ENST00000494123 IL5RAQ01344 420 aa12.71□□□□□ -0.37
BRCA1-223ENST00000494123 KCNMB1Q16558 191 aa12.71□□□□□ -0.37
BRCA1-223ENST00000494123 OTPQ5XKR4 325 aa12.71□□□□□ -0.37
BRCA1-223ENST00000494123 MDP1Q86V88 176 aa12.71□□□□□ -0.37
BRCA1-223ENST00000494123 ZNF511Q8NB15 262 aa12.71□□□□□ -0.37
BRCA1-223ENST00000494123 ACBD4Q8NC06 268 aa12.71□□□□□ -0.37
BRCA1-223ENST00000494123 UBE2FQ969M7 185 aa12.71□□□□□ -0.37
BRCA1-223ENST00000494123 ZMYND19Q96E35 227 aaPredicted RBP12.71□□□□□ -0.37
BRCA1-223ENST00000494123 ZNF224Q9NZL3 707 aa12.71□□□□□ -0.37
BRCA1-223ENST00000494123 ZNF503-AS2A6NEH8 195 aa12.7□□□□□ -0.38
BRCA1-223ENST00000494123 SLC22A31A6NKX4 558 aa12.7□□□□□ -0.38
BRCA1-223ENST00000494123 M0R1B8 84 aa12.7□□□□□ -0.38
BRCA1-223ENST00000494123 CLIC3O95833 236 aa12.7□□□□□ -0.38
BRCA1-223ENST00000494123 TFP02787 698 aa12.7□□□□□ -0.38
BRCA1-223ENST00000494123 SLC2A5P22732 501 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms