RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 FMN1Q68DA7 1419 aa4.31□□□□□ -1.72
SMC2-205ENST00000493955 A0A1B0GVI7 797 aa4.31□□□□□ -1.72
SMC2-205ENST00000493955 EIF4E2O60573 245 aaKnown RBP4.31□□□□□ -1.72
SMC2-205ENST00000493955 ACSM4P0C7M7 580 aa4.31□□□□□ -1.72
SMC2-205ENST00000493955 FOLR1P15328 257 aa4.31□□□□□ -1.72
SMC2-205ENST00000493955 CDKN1BP46527 198 aa4.31□□□□□ -1.72
SMC2-205ENST00000493955 OR1G1P47890 313 aa4.31□□□□□ -1.72
SMC2-205ENST00000493955 SH3BGRP55822 239 aaPredicted RBP4.31□□□□□ -1.72
SMC2-205ENST00000493955 AQP6Q13520 282 aa4.31□□□□□ -1.72
SMC2-205ENST00000493955 IL17AQ16552 155 aa4.31□□□□□ -1.72
SMC2-205ENST00000493955 ZNF630Q2M218 657 aaPredicted RBP4.31□□□□□ -1.72
SMC2-205ENST00000493955 KLHL40Q2TBA0 621 aa4.31□□□□□ -1.72
SMC2-205ENST00000493955 AGBL2Q5U5Z8 902 aa4.31□□□□□ -1.72
SMC2-205ENST00000493955 ANGPTL8Q6UXH0 198 aa4.31□□□□□ -1.72
SMC2-205ENST00000493955 ZNF321PQ8N8H1 164 aa4.31□□□□□ -1.72
SMC2-205ENST00000493955 TTC29Q8NA56 475 aaPredicted RBP4.31□□□□□ -1.72
SMC2-205ENST00000493955 OR4F15Q8NGB8 312 aa4.31□□□□□ -1.72
SMC2-205ENST00000493955 LYPD6BQ8NI32 183 aa4.31□□□□□ -1.72
SMC2-205ENST00000493955 GPX8Q8TED1 209 aa4.31□□□□□ -1.72
SMC2-205ENST00000493955 DUS3LQ96G46 650 aaKnown RBP4.31□□□□□ -1.72
SMC2-205ENST00000493955 ECSITQ9BQ95 431 aa4.31□□□□□ -1.72
SMC2-205ENST00000493955 FANCEQ9HB96 536 aa4.31□□□□□ -1.72
SMC2-205ENST00000493955 IL17CQ9P0M4 197 aa4.31□□□□□ -1.72
SMC2-205ENST00000493955 PEF1Q9UBV8 284 aaKnown RBP4.31□□□□□ -1.72
SMC2-205ENST00000493955 LGALS13Q9UHV8 139 aa4.31□□□□□ -1.72
SMC2-205ENST00000493955 KIF25-AS1Q9Y6Z4 181 aa4.31□□□□□ -1.72
SMC2-205ENST00000493955 PTPRKQ15262 1439 aa4.31□□□□□ -1.72
SMC2-205ENST00000493955 SETD1AO15047 1707 aaKnown RBP4.31□□□□□ -1.72
SMC2-205ENST00000493955 KCNE1BA0A087WTH5 132 aa4.3□□□□□ -1.72
SMC2-205ENST00000493955 ZNF816-ZNF321PA0A0X1KG74 233 aa4.3□□□□□ -1.72
SMC2-205ENST00000493955 GJE1A6NN92 205 aa4.3□□□□□ -1.72
SMC2-205ENST00000493955 ACTL6AO96019 429 aa4.3□□□□□ -1.72
SMC2-205ENST00000493955 TDGF1P13385 188 aa4.3□□□□□ -1.72
SMC2-205ENST00000493955 KRTAP5-9P26371 169 aa4.3□□□□□ -1.72
SMC2-205ENST00000493955 TDGF1P3P51864 188 aa4.3□□□□□ -1.72
SMC2-205ENST00000493955 CRISP1P54107 249 aa4.3□□□□□ -1.72
SMC2-205ENST00000493955 FGF8P55075 233 aaPredicted RBP4.3□□□□□ -1.72
SMC2-205ENST00000493955 EIF3EP60228 445 aaKnown RBP4.3□□□□□ -1.72
SMC2-205ENST00000493955 IRF8Q02556 426 aa4.3□□□□□ -1.72
SMC2-205ENST00000493955 CLINT1Q14677 625 aa4.3□□□□□ -1.72
SMC2-205ENST00000493955 SGCAQ16586 387 aa4.3□□□□□ -1.72
SMC2-205ENST00000493955 RNF212Q495C1 297 aa4.3□□□□□ -1.72
SMC2-205ENST00000493955 HIKESHIQ53FT3 197 aa4.3□□□□□ -1.72
SMC2-205ENST00000493955 BEX5Q5H9J7 111 aa4.3□□□□□ -1.72
SMC2-205ENST00000493955 PRELID2Q8N945 189 aa4.3□□□□□ -1.72
SMC2-205ENST00000493955 OR9G4Q8NGQ1 327 aa4.3□□□□□ -1.72
SMC2-205ENST00000493955 OR5B12Q96R08 314 aa4.3□□□□□ -1.72
SMC2-205ENST00000493955 MMP26Q9NRE1 261 aa4.3□□□□□ -1.72
SMC2-205ENST00000493955 CCDC59Q9P031 241 aaKnown RBP4.3□□□□□ -1.72
SMC2-205ENST00000493955 TP53TG3Q9ULZ0 132 aa4.3□□□□□ -1.72
SMC2-205ENST00000493955 VWDEQ8N2E2 1590 aa4.3□□□□□ -1.72
SMC2-205ENST00000493955 PLA2R1Q13018 1463 aa4.3□□□□□ -1.72
SMC2-205ENST00000493955 CLIP1P30622 1438 aa4.3□□□□□ -1.72
SMC2-205ENST00000493955 CEP152O94986 1710 aa4.3□□□□□ -1.72
SMC2-205ENST00000493955 ZC3H13Q5T200 1668 aaKnown RBP4.3□□□□□ -1.72
SMC2-205ENST00000493955 TRAV39A0A0B4J263 110 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 H3BNH8 94 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 MOSP00540 346 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 IGHV3-43DP0DP04 118 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 CALM1P0DP23 149 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 CALM2P0DP24 149 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 CALM3P0DP25 149 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 ZNF250P15622 560 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 SLC26A3P40879 764 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 LYZP61626 148 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 REG3AQ06141 175 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 PGGHGQ32M88 737 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 OR52W1Q6IF63 320 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 ACP7Q6ZNF0 438 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 CMC1Q7Z7K0 106 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 SUMF2Q8NBJ7 301 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 ACER1Q8TDN7 264 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 GEMIN6Q8WXD5 167 aaKnown RBP4.29□□□□□ -1.72
SMC2-205ENST00000493955 P2RX4Q99571 388 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 BLZF1Q9H2G9 400 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 CLMPQ9H6B4 373 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 RPF2Q9H7B2 306 aaKnown RBP4.29□□□□□ -1.72
SMC2-205ENST00000493955 NTN4Q9HB63 628 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 CHRAC1Q9NRG0 131 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 GPATCH8Q9UKJ3 1502 aaKnown RBP4.29□□□□□ -1.72
SMC2-205ENST00000493955 NPATQ14207 1427 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 CASKIN1Q8WXD9 1431 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 CNTLNQ9NXG0 1405 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 ARPC4-TTLL3A0A0A6YYG9 625 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 CYSRT1A8MQ03 144 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 LYRM9A8MSI8 78 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 AIREO43918 545 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 CCNB2O95067 398 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 CD1EP15812 388 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 MGMTP16455 207 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 AK4P27144 223 aaPredicted RBP4.29□□□□□ -1.72
SMC2-205ENST00000493955 SLC11A1P49279 550 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 NUTF2P61970 127 aaKnown RBP4.29□□□□□ -1.72
SMC2-205ENST00000493955 RAB11AP62491 216 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 GNB2P62879 340 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 SLC25A11Q02978 314 aaKnown RBP4.29□□□□□ -1.72
SMC2-205ENST00000493955 TWF1Q12792 350 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 DAZ2Q13117 558 aaKnown RBP4.29□□□□□ -1.72
SMC2-205ENST00000493955 RAB11BQ15907 218 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 KCTD19Q17RG1 926 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms