RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 NUP54Q7Z3B4 507 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 LHFPL3Q86UP9 236 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 SVBPQ8N300 66 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 ZNF565Q8N9K5 539 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 C17orf47Q8NEP4 570 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 ATP6V1C2Q8NEY4 427 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 PROKR2Q8NFJ6 384 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 DMBX1Q8NFW5 382 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 OR1J4Q8NGS1 313 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 OR10A6Q8NH74 314 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 LINC01560Q8TB33 94 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 RNF138Q8WVD3 245 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 LRRC46Q96FV0 321 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 ADOQ96SZ5 270 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 PIP5K1AQ99755 562 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 KLHDC3Q9BQ90 382 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 SAP130Q9H0E3 1048 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 METTL7AQ9H8H3 244 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 THUMPD1Q9NXG2 353 aaKnown RBP7.32□□□□□ -1.24
HDAC6-234ENST00000493923 DNAJB12Q9NXW2 375 aaKnown RBP7.32□□□□□ -1.24
HDAC6-234ENST00000493923 AHSPQ9NZD4 102 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 ING1Q9UK53 422 aaPredicted RBP7.32□□□□□ -1.24
HDAC6-234ENST00000493923 CBLCQ9ULV8 474 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 PLEKHA6Q9Y2H5 1048 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 ABCA2Q9BZC7 2435 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 NSD1Q96L73 2696 aaPredicted RBP7.32□□□□□ -1.24
HDAC6-234ENST00000493923 HEATR5AQ86XA9 2040 aa7.32□□□□□ -1.24
HDAC6-234ENST00000493923 A0A1B0GWJ7 208 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 MBD3L4A6NDZ8 208 aaPredicted RBP7.31□□□□□ -1.24
HDAC6-234ENST00000493923 MBD3L3A6NE82 208 aaPredicted RBP7.31□□□□□ -1.24
HDAC6-234ENST00000493923 ARRDC5A6NEK1 342 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 FRG2CA6NGY1 282 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 MBD3L5A6NJ08 208 aaPredicted RBP7.31□□□□□ -1.24
HDAC6-234ENST00000493923 HSPB2A8KAH6 182 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 AHRRA9YTQ3 701 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 NUPL2O15504 423 aaKnown RBP7.31□□□□□ -1.24
HDAC6-234ENST00000493923 ZIC3O60481 467 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 ULK1O75385 1050 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 CLN5O75503 358 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 REM1O75628 298 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 IGKV1D-16P01601 117 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 APOC3P02656 99 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 SEMG1P04279 462 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 NMBP08949 121 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 FOLR2P14207 255 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 GABRB1P18505 474 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 RAB3BP20337 219 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 DRD5P21918 477 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 GALP22466 123 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 TACR1P25103 407 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 TIA1P31483 386 aaKnown RBP eCLIP7.31□□□□□ -1.24
HDAC6-234ENST00000493923 CD79BP40259 229 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 CRYBB2P43320 205 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 EVX1P49640 407 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 LHX2P50458 406 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 ASCL1P50553 236 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 GFRA1P56159 465 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 NRG3P56975 720 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 RAP2BP61225 183 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 RPS7P62081 194 aaKnown RBP7.31□□□□□ -1.24
HDAC6-234ENST00000493923 TRA2BP62995 288 aaKnown RBP7.31□□□□□ -1.24
HDAC6-234ENST00000493923 ZNF155Q12901 538 aaPredicted RBP7.31□□□□□ -1.24
HDAC6-234ENST00000493923 IL18Q14116 193 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 GK2Q14410 553 aaPredicted RBP7.31□□□□□ -1.24
HDAC6-234ENST00000493923 SPHARQ15513 63 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 CEBPEQ15744 281 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 HSPB2Q16082 182 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 SSX1Q16384 188 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 FBXL19-AS1Q494R0 122 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 ZNF385BQ569K4 471 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 FREM1Q5H8C1 2179 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 LRIF1Q5T3J3 769 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 FAM71E1Q6IPT2 247 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 SLC30A6Q6NXT4 461 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 CNIH2Q6PI25 160 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 CSPG4Q6UVK1 2322 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 ADGRE4PQ86SQ3 457 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 SERPINA11Q86U17 422 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 LSRQ86X29 649 aaPredicted RBP7.31□□□□□ -1.24
HDAC6-234ENST00000493923 FTMTQ8N4E7 242 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 FAM86B1Q8N7N1 296 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 OR5M1Q8NGP8 315 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 MBD3L2Q8NHZ7 208 aaPredicted RBP7.31□□□□□ -1.24
HDAC6-234ENST00000493923 NUDT8Q8WV74 236 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 RNASE6Q93091 150 aaKnown RBP7.31□□□□□ -1.24
HDAC6-234ENST00000493923 CPNE4Q96A23 557 aaPredicted RBP7.31□□□□□ -1.24
HDAC6-234ENST00000493923 RFT1Q96AA3 541 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 MRPL48Q96GC5 212 aaKnown RBP7.31□□□□□ -1.24
HDAC6-234ENST00000493923 ITCHQ96J02 903 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 CPPED1Q9BRF8 314 aaPredicted RBP7.31□□□□□ -1.24
HDAC6-234ENST00000493923 SPATA5L1Q9BVQ7 753 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 HDHD2Q9H0R4 259 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 TUBB1Q9H4B7 451 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 PIF1Q9H611 641 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 RNF167Q9H6Y7 350 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 HHATLQ9HCP6 504 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 DLL4Q9NR61 685 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 KLRF1Q9NZS2 232 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 JKAMPQ9P055 326 aa7.31□□□□□ -1.24
HDAC6-234ENST00000493923 B4GALT7Q9UBV7 327 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms