RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 ZMYND19Q96E35 227 aaPredicted RBP11.79□□□□□ -0.52
MSH6-208ENST00000493177 ZC3HAV1LQ96H79 300 aaKnown RBP11.79□□□□□ -0.52
MSH6-208ENST00000493177 RACGAP1Q9H0H5 632 aa11.79□□□□□ -0.52
MSH6-208ENST00000493177 MOKQ9UQ07 419 aa11.79□□□□□ -0.52
MSH6-208ENST00000493177 ALPK2Q86TB3 2170 aa11.78□□□□□ -0.52
MSH6-208ENST00000493177 IGLV1-36A0A0B4J1U3 117 aa11.78□□□□□ -0.52
MSH6-208ENST00000493177 TVP23AA6NH52 213 aa11.78□□□□□ -0.52
MSH6-208ENST00000493177 SLC22A31A6NKX4 558 aa11.78□□□□□ -0.52
MSH6-208ENST00000493177 C16orf97H3BN30 126 aa11.78□□□□□ -0.52
MSH6-208ENST00000493177 FAM20BO75063 409 aa11.78□□□□□ -0.52
MSH6-208ENST00000493177 WBP4O75554 376 aaKnown RBP11.78□□□□□ -0.52
MSH6-208ENST00000493177 SEC14L2O76054 403 aa11.78□□□□□ -0.52
MSH6-208ENST00000493177 GLCEO94923 617 aa11.78□□□□□ -0.52
MSH6-208ENST00000493177 GOSR1O95249 250 aa11.78□□□□□ -0.52
MSH6-208ENST00000493177 GPANK1O95872 356 aa11.78□□□□□ -0.52
MSH6-208ENST00000493177 CGAP01215 116 aa11.78□□□□□ -0.52
MSH6-208ENST00000493177 MPGP29372 298 aa11.78□□□□□ -0.52
MSH6-208ENST00000493177 HTR1FP30939 366 aa11.78□□□□□ -0.52
MSH6-208ENST00000493177 CDAP32320 146 aa11.78□□□□□ -0.52
MSH6-208ENST00000493177 GLO1Q04760 184 aa11.78□□□□□ -0.52
MSH6-208ENST00000493177 SGCAQ16586 387 aa11.78□□□□□ -0.52
MSH6-208ENST00000493177 SMN1Q16637 294 aaKnown RBP11.78□□□□□ -0.52
MSH6-208ENST00000493177 SLC25A30Q5SVS4 291 aa11.78□□□□□ -0.52
MSH6-208ENST00000493177 B3GLCTQ6Y288 498 aa11.78□□□□□ -0.52
MSH6-208ENST00000493177 BEND4Q6ZU67 534 aa11.78□□□□□ -0.52
MSH6-208ENST00000493177 ZBTB46Q86UZ6 589 aa11.78□□□□□ -0.52
MSH6-208ENST00000493177 GLB1L2Q8IW92 636 aa11.78□□□□□ -0.52
MSH6-208ENST00000493177 ZNF786Q8N393 782 aa11.78□□□□□ -0.52
MSH6-208ENST00000493177 BPIFB6Q8NFQ5 453 aa11.78□□□□□ -0.52
MSH6-208ENST00000493177 OR10H5Q8NGA6 315 aa11.78□□□□□ -0.52
MSH6-208ENST00000493177 ZNRF4Q8WWF5 429 aa11.78□□□□□ -0.52
MSH6-208ENST00000493177 ZNF837Q96EG3 531 aaPredicted RBP11.78□□□□□ -0.52
MSH6-208ENST00000493177 AMBNQ9NP70 447 aa11.78□□□□□ -0.52
MSH6-208ENST00000493177 MALT1Q9UDY8 824 aa11.78□□□□□ -0.52
MSH6-208ENST00000493177 WARS2Q9UGM6 360 aaKnown RBP11.78□□□□□ -0.52
MSH6-208ENST00000493177 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.78□□□□□ -0.529e-8■■■■□ 21.9
MSH6-208ENST00000493177 CREBBPQ92793 2442 aa11.78□□□□□ -0.52
MSH6-208ENST00000493177 CIB4A0PJX0 185 aa11.77□□□□□ -0.53
MSH6-208ENST00000493177 CCDC182A6NF36 153 aa11.77□□□□□ -0.53
MSH6-208ENST00000493177 RPL36A-HNRNPH2H7BZ11 118 aa11.77□□□□□ -0.53
MSH6-208ENST00000493177 CNOT4O95628 575 aaKnown RBP11.77□□□□□ -0.53
MSH6-208ENST00000493177 MRPL3P09001 348 aaKnown RBP11.77□□□□□ -0.53
MSH6-208ENST00000493177 ZNF823P16415 610 aa11.77□□□□□ -0.53
MSH6-208ENST00000493177 SLC2A5P22732 501 aa11.77□□□□□ -0.53
MSH6-208ENST00000493177 LAP3P28838 519 aa11.77□□□□□ -0.53
MSH6-208ENST00000493177 GSTT1P30711 240 aa11.77□□□□□ -0.53
MSH6-208ENST00000493177 ATP6V1E1P36543 226 aa11.77□□□□□ -0.53
MSH6-208ENST00000493177 ZNF133P52736 654 aaPredicted RBP11.77□□□□□ -0.53
MSH6-208ENST00000493177 BLVRAP53004 296 aa11.77□□□□□ -0.53
MSH6-208ENST00000493177 FOXG1P55316 489 aaPredicted RBP11.77□□□□□ -0.53
MSH6-208ENST00000493177 ARF1P84077 181 aaKnown RBP11.77□□□□□ -0.53
MSH6-208ENST00000493177 TEKQ02763 1124 aa11.77□□□□□ -0.53
MSH6-208ENST00000493177 ZNF91Q05481 1191 aa11.77□□□□□ -0.53
MSH6-208ENST00000493177 C6orf141Q5SZD1 244 aa11.77□□□□□ -0.53
MSH6-208ENST00000493177 OTPQ5XKR4 325 aa11.77□□□□□ -0.53
MSH6-208ENST00000493177 ZNF474Q6S9Z5 364 aaPredicted RBP11.77□□□□□ -0.53
MSH6-208ENST00000493177 ZNF813Q6ZN06 617 aa11.77□□□□□ -0.53
MSH6-208ENST00000493177 Q6ZT83 130 aa11.77□□□□□ -0.53
MSH6-208ENST00000493177 ZNF511Q8NB15 262 aa11.77□□□□□ -0.53
MSH6-208ENST00000493177 FBLIM1Q8WUP2 373 aa11.77□□□□□ -0.53
MSH6-208ENST00000493177 HTRA1Q92743 480 aa11.77□□□□□ -0.53
MSH6-208ENST00000493177 RNFT2Q96EX2 444 aa11.77□□□□□ -0.53
MSH6-208ENST00000493177 TEAD3Q99594 435 aa11.77□□□□□ -0.53
MSH6-208ENST00000493177 FOXB1Q99853 325 aa11.77□□□□□ -0.53
MSH6-208ENST00000493177 UBAP1Q9NZ09 502 aa11.77□□□□□ -0.53
MSH6-208ENST00000493177 PLEKHA6Q9Y2H5 1048 aa11.77□□□□□ -0.53
MSH6-208ENST00000493177 LRCH1Q9Y2L9 728 aa11.77□□□□□ -0.53
MSH6-208ENST00000493177 RPL36Q9Y3U8 105 aaKnown RBP11.77□□□□□ -0.53
MSH6-208ENST00000493177 PCDHGB5Q9Y5G0 923 aa11.77□□□□□ -0.53
MSH6-208ENST00000493177 NOTCH2Q04721 2471 aa11.77□□□□□ -0.53
MSH6-208ENST00000493177 A0A096LPE4 126 aa11.76□□□□□ -0.53
MSH6-208ENST00000493177 A0A1W2PPZ6 126 aa11.76□□□□□ -0.53
MSH6-208ENST00000493177 ZNF99A8MXY4 864 aaPredicted RBP11.76□□□□□ -0.53
MSH6-208ENST00000493177 LYZL6O75951 148 aa11.76□□□□□ -0.53
MSH6-208ENST00000493177 MPZL1O95297 269 aa11.76□□□□□ -0.53
MSH6-208ENST00000493177 ITGA5P08648 1049 aa11.76□□□□□ -0.53
MSH6-208ENST00000493177 DBTP11182 482 aaKnown RBP11.76□□□□□ -0.53
MSH6-208ENST00000493177 B4GALT1P15291 398 aa11.76□□□□□ -0.53
MSH6-208ENST00000493177 IGHV1-2P23083 117 aa11.76□□□□□ -0.53
MSH6-208ENST00000493177 UGT2B10P36537 528 aa11.76□□□□□ -0.53
MSH6-208ENST00000493177 MTNR1AP48039 350 aa11.76□□□□□ -0.53
MSH6-208ENST00000493177 TGFBR3Q03167 851 aa11.76□□□□□ -0.53
MSH6-208ENST00000493177 TMED1Q13445 227 aa11.76□□□□□ -0.53
MSH6-208ENST00000493177 STK11Q15831 433 aa11.76□□□□□ -0.53
MSH6-208ENST00000493177 MEP1BQ16820 701 aa11.76□□□□□ -0.53
MSH6-208ENST00000493177 KLHL24Q6TFL4 600 aa11.76□□□□□ -0.53
MSH6-208ENST00000493177 LYPD4Q6UWN0 246 aa11.76□□□□□ -0.53
MSH6-208ENST00000493177 CXorf67Q86X51 503 aaPredicted RBP11.76□□□□□ -0.53
MSH6-208ENST00000493177 ERI1Q8IV48 349 aaKnown RBP11.76□□□□□ -0.53
MSH6-208ENST00000493177 LRRC18Q8N456 261 aa11.76□□□□□ -0.53
MSH6-208ENST00000493177 OR51G2Q8NGK0 314 aa11.76□□□□□ -0.53
MSH6-208ENST00000493177 C11orf40Q8WZ69 217 aa11.76□□□□□ -0.53
MSH6-208ENST00000493177 NINJ1Q92982 152 aa11.76□□□□□ -0.53
MSH6-208ENST00000493177 PIK3IP1Q96FE7 263 aa11.76□□□□□ -0.53
MSH6-208ENST00000493177 WFIKKN1Q96NZ8 548 aa11.76□□□□□ -0.53
MSH6-208ENST00000493177 CNN2Q99439 309 aaKnown RBP11.76□□□□□ -0.53
MSH6-208ENST00000493177 EMC7Q9NPA0 242 aa11.76□□□□□ -0.53
MSH6-208ENST00000493177 POLE4Q9NR33 117 aa11.76□□□□□ -0.53
MSH6-208ENST00000493177 TMEM38BQ9NVV0 291 aa11.76□□□□□ -0.53
MSH6-208ENST00000493177 SCN3BQ9NY72 215 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms