RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	DECR2	Q9NUI1	292 aa		13.09	□□□□□ -0.31
MRPL55-231	ENST00000492170	IGHV1-69-2	A0A0G2JMI3	117 aa		13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	NPIPB13	A6NJU9	1138 aa		13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	CLDN25	C9JDP6	229 aa		13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	NPIPB4	C9JG80	1138 aa		13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	SLC2A10	O95528	541 aa		13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	PNP	P00491	289 aa		13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	IFNA14	P01570	189 aa		13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	TNFRSF1B	P20333	461 aa		13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	CCNO	P22674	350 aa		13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	CRYBB2	P43320	205 aa		13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	GSK3B	P49841	420 aa		13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	MRPS34	P82930	218 aa	Known RBP	13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	MVK	Q03426	396 aa		13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	GLO1	Q04760	184 aa		13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	CD47	Q08722	323 aa		13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	PABPC1L2A	Q5JQF8	200 aa		13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	AVPI1	Q5T686	147 aa		13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	ACSM5	Q6NUN0	579 aa		13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	FAHD2B	Q6P2I3	314 aa	Predicted RBP	13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	UNQ6126/PRO20091	Q6UXV3	157 aa		13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	C12orf54	Q6X4T0	127 aa		13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	PGAM4	Q8N0Y7	254 aa		13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	SEMA6D	Q8NFY4	1073 aa		13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	ZNF418	Q8TF45	676 aa	Predicted RBP	13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	ZFAND2B	Q8WV99	257 aa		13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	FAHD2A	Q96GK7	314 aa		13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	SAP30L	Q9HAJ7	183 aa		13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	SMURF2	Q9HAU4	748 aa		13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	C20orf141	Q9NUB4	165 aa		13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	EIF3K	Q9UBQ5	218 aa	Known RBP	13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	RIMS3	Q9UJD0	308 aa		13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	MED31	Q9Y3C7	131 aa		13.08	□□□□□ -0.32
MRPL55-231	ENST00000492170	VENTX	O95231	258 aa		13.07	□□□□□ -0.32
MRPL55-231	ENST00000492170	IGHV3-13	P01766	116 aa		13.07	□□□□□ -0.32
MRPL55-231	ENST00000492170	THRB	P10828	461 aa		13.07	□□□□□ -0.32
MRPL55-231	ENST00000492170	STOM	P27105	288 aa		13.07	□□□□□ -0.32
MRPL55-231	ENST00000492170	GCH1	P30793	250 aa		13.07	□□□□□ -0.32
MRPL55-231	ENST00000492170	CDA	P32320	146 aa		13.07	□□□□□ -0.32
MRPL55-231	ENST00000492170	ZNF81	P51508	661 aa		13.07	□□□□□ -0.32
MRPL55-231	ENST00000492170	PIN1	Q13526	163 aa	Predicted RBP	13.07	□□□□□ -0.32
MRPL55-231	ENST00000492170	ARMC4	Q5T2S8	1044 aa		13.07	□□□□□ -0.32
MRPL55-231	ENST00000492170	THSD4	Q6ZMP0	1018 aa		13.07	□□□□□ -0.32
MRPL55-231	ENST00000492170	USP51	Q70EK9	711 aa		13.07	□□□□□ -0.32
MRPL55-231	ENST00000492170	CPEB3	Q8NE35	698 aa	Known RBP	13.07	□□□□□ -0.32
MRPL55-231	ENST00000492170	MOSPD2	Q8NHP6	518 aa		13.07	□□□□□ -0.32
MRPL55-231	ENST00000492170	BCAS4	Q8TDM0	211 aa		13.07	□□□□□ -0.32
MRPL55-231	ENST00000492170	LIPH	Q8WWY8	451 aa		13.07	□□□□□ -0.32
MRPL55-231	ENST00000492170	NSMAF	Q92636	917 aa		13.07	□□□□□ -0.32
MRPL55-231	ENST00000492170	TIMD4	Q96H15	378 aa		13.07	□□□□□ -0.32
MRPL55-231	ENST00000492170	MPZL1	O95297	269 aa		13.06	□□□□□ -0.32
MRPL55-231	ENST00000492170	TSPAN19	P0C672	248 aa		13.06	□□□□□ -0.32
MRPL55-231	ENST00000492170	ZNF32	P17041	273 aa		13.06	□□□□□ -0.32
MRPL55-231	ENST00000492170	GDI2	P50395	445 aa	Known RBP	13.06	□□□□□ -0.32
MRPL55-231	ENST00000492170	FMOD	Q06828	376 aa		13.06	□□□□□ -0.32
MRPL55-231	ENST00000492170	TOP3A	Q13472	1001 aa	Predicted RBP	13.06	□□□□□ -0.32
MRPL55-231	ENST00000492170	TAF11	Q15544	211 aa		13.06	□□□□□ -0.32
MRPL55-231	ENST00000492170	SGCA	Q16586	387 aa		13.06	□□□□□ -0.32
MRPL55-231	ENST00000492170	TST	Q16762	297 aa	Known RBP	13.06	□□□□□ -0.32
MRPL55-231	ENST00000492170	HFE	Q30201	348 aa		13.06	□□□□□ -0.32
MRPL55-231	ENST00000492170	ZNF718	Q3SXZ3	478 aa		13.06	□□□□□ -0.32
MRPL55-231	ENST00000492170	LRRC23	Q53EV4	343 aa	Predicted RBP	13.06	□□□□□ -0.32
MRPL55-231	ENST00000492170	CYBRD1	Q53TN4	286 aa		13.06	□□□□□ -0.32
MRPL55-231	ENST00000492170	FAM209A	Q5JX71	171 aa		13.06	□□□□□ -0.32
MRPL55-231	ENST00000492170	GTF3A	Q92664	365 aa	Known RBP	13.06	□□□□□ -0.32
MRPL55-231	ENST00000492170	HDAC2	Q92769	488 aa	Known RBP	13.06	□□□□□ -0.32
MRPL55-231	ENST00000492170	NABP1	Q96AH0	204 aa		13.06	□□□□□ -0.32
MRPL55-231	ENST00000492170	ELMOD3	Q96FG2	381 aa		13.06	□□□□□ -0.32
MRPL55-231	ENST00000492170	KCTD14	Q9BQ13	255 aa	Predicted RBP	13.06	□□□□□ -0.32
MRPL55-231	ENST00000492170	ALG12	Q9BV10	488 aa		13.06	□□□□□ -0.32
MRPL55-231	ENST00000492170	TXNIP	Q9H3M7	391 aa		13.06	□□□□□ -0.32
MRPL55-231	ENST00000492170	G6PC2	Q9NQR9	355 aa		13.06	□□□□□ -0.32
MRPL55-231	ENST00000492170	NDE1	Q9NXR1	346 aa		13.06	□□□□□ -0.32
MRPL55-231	ENST00000492170	WIPI2	Q9Y4P8	454 aa		13.06	□□□□□ -0.32
MRPL55-231	ENST00000492170	UGT2A1	Q9Y4X1	527 aa		13.06	□□□□□ -0.32
MRPL55-231	ENST00000492170	IGKV1D-43	A0A0B4J1Z2	117 aa		13.05	□□□□□ -0.32
MRPL55-231	ENST00000492170		A0A0G2JMP0	313 aa		13.05	□□□□□ -0.32
MRPL55-231	ENST00000492170		A0A0X1KG70	313 aa		13.05	□□□□□ -0.32
MRPL55-231	ENST00000492170	PLSCR5	A0PG75	271 aa		13.05	□□□□□ -0.32
MRPL55-231	ENST00000492170	C5orf49	A4QMS7	147 aa		13.05	□□□□□ -0.32
MRPL55-231	ENST00000492170	CXCR6	O00574	342 aa		13.05	□□□□□ -0.32
MRPL55-231	ENST00000492170	IGHV2-5	P01817	119 aa		13.05	□□□□□ -0.32
MRPL55-231	ENST00000492170	HSD17B1	P14061	328 aa		13.05	□□□□□ -0.32
MRPL55-231	ENST00000492170	EPHA1	P21709	976 aa		13.05	□□□□□ -0.32
MRPL55-231	ENST00000492170	IFNA8	P32881	189 aa		13.05	□□□□□ -0.32
MRPL55-231	ENST00000492170	GUCA1A	P43080	201 aa	Predicted RBP	13.05	□□□□□ -0.32
MRPL55-231	ENST00000492170	OR1E2	P47887	323 aa		13.05	□□□□□ -0.32
MRPL55-231	ENST00000492170	MNAT1	P51948	309 aa		13.05	□□□□□ -0.32
MRPL55-231	ENST00000492170	ACTG1	P63261	375 aa		13.05	□□□□□ -0.32
MRPL55-231	ENST00000492170	SELENOW	P63302	87 aa		13.05	□□□□□ -0.32
MRPL55-231	ENST00000492170	ALG10	Q5BKT4	473 aa		13.05	□□□□□ -0.32
MRPL55-231	ENST00000492170	SPATA46	Q5T0L3	261 aa		13.05	□□□□□ -0.32
MRPL55-231	ENST00000492170	C1orf174	Q8IYL3	243 aa		13.05	□□□□□ -0.32
MRPL55-231	ENST00000492170	ZNF101	Q8IZC7	436 aa		13.05	□□□□□ -0.32
MRPL55-231	ENST00000492170	OR4M2	Q8NGB6	313 aa		13.05	□□□□□ -0.32
MRPL55-231	ENST00000492170	AKR7L	Q8NHP1	331 aa		13.05	□□□□□ -0.32
MRPL55-231	ENST00000492170	FNDC8	Q8TC99	324 aa		13.05	□□□□□ -0.32
MRPL55-231	ENST00000492170	IPCEF1	Q8WWN9	437 aa	Predicted RBP	13.05	□□□□□ -0.32
MRPL55-231	ENST00000492170	RAB1C	Q92928	201 aa		13.05	□□□□□ -0.32
MRPL55-231	ENST00000492170	NMD3	Q96D46	503 aa	Known RBP	13.05	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms