RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 APH1BQ8WW43 257 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 TRUB1Q8WWH5 349 aaKnown RBP9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 IGFBPL1Q8WX77 278 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 ASB10Q8WXI3 467 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 HIST1H2ACQ93077 130 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 FBXW5Q969U6 566 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 RASD2Q96D21 266 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 NMD3Q96D46 503 aaKnown RBP9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 Q96MT0 163 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 ERMAPQ96PL5 475 aaPredicted RBP9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 HCAR1Q9BXC0 346 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 PRRG3Q9BZD7 231 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 NMNAT2Q9BZQ4 307 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 CMC2Q9NRP2 79 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 BAIAP2Q9UQB8 552 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 NOX1Q9Y5S8 564 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 MTORP42345 2549 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 DPRXA6NFQ7 191 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 OR6C65A6NJZ3 312 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 IDH3BO43837 385 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 WBP4O75554 376 aaKnown RBP9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 SERPINI2O75830 405 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 ITGA5P08648 1049 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 IFNGR1P15260 489 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 AHCYP23526 432 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 NOS3P29474 1203 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 RPL4P36578 427 aaKnown RBP9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 CDKN2AP42771 156 aaKnown RBP9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 PTH2RP49190 550 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 RPL27P61353 136 aaKnown RBP9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 CD47Q08722 323 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 KRR1Q13601 381 aaKnown RBP9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 GABRA6Q16445 453 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 ZNF672Q499Z4 452 aaPredicted RBP9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 SLC35F1Q5T1Q4 408 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 TSPO2Q5TGU0 170 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 TMEM108Q6UXF1 575 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 SLC35D2Q76EJ3 337 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 AAED1Q7RTV5 226 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 BCDIN3DQ7Z5W3 292 aaKnown RBP9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 GPAT4Q86UL3 456 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 SATL1Q86VE3 508 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 UEVLDQ8IX04 471 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 TMEM123Q8N131 208 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 ARIH2OSQ8N7S6 290 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 NPEPL1Q8NDH3 523 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 LILRB1Q8NHL6 650 aaPredicted RBP9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 RHOXF1Q8NHV9 184 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 FAM81AQ8TBF8 368 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 MYDGFQ969H8 173 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 PERPQ96FX8 193 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 RADILQ96JH8 1075 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 C18orf12Q96KH6 178 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 KCNK17Q96T54 332 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 EMC6Q9BV81 110 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 MRPL13Q9BYD1 178 aaKnown RBP9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 SLCO5A1Q9H2Y9 848 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 HINT3Q9NQE9 182 aaKnown RBP9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 SLC7A10Q9NS82 523 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 PLCXD1Q9NUJ7 323 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 ZNF701Q9NV72 531 aaPredicted RBP9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 IMPAD1Q9NX62 359 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 TVP23BQ9NYZ1 205 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 PTTG2Q9NZH5 202 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 RSL24D1Q9UHA3 163 aaKnown RBP9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 PCDHGB1Q9Y5G3 927 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 SLC25A15Q9Y619 301 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 RAI1Q7Z5J4 1906 aaPredicted RBP9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 FREM1Q5H8C1 2179 aa9.24□□□□□ -0.93
SCAMP4-208ENST00000489554 IGKV1D-43A0A0B4J1Z2 117 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 OR6C68A6NDL8 312 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 SNTNA6NMZ2 147 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 H7C1C5 153 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 OR6A2O95222 327 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 PGA4P0DJD7 388 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 PGA3P0DJD8 388 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 ZNF43P17038 809 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 SLC2A5P22732 501 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 PTAFRP25105 342 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 MPGP29372 298 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 BIDP55957 195 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 SNRPGP62308 76 aaKnown RBP9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 LCN6P62502 163 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 CRMP1Q14194 572 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 MAD2L1BPQ15013 274 aaPredicted RBP9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 HIST3H3Q16695 136 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 PHYHD1Q5SRE7 291 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 SLC25A30Q5SVS4 291 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 AADACL4Q5VUY2 407 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 GPR139Q6DWJ6 353 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 KCTD8Q6ZWB6 473 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 BIVMQ86UB2 503 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 SLC37A3Q8NCC5 494 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 SDR9C7Q8NEX9 313 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 BBS1Q8NFJ9 593 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 KBTBD8Q8NFY9 601 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 OR4K13Q8NH42 304 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 OR52N5Q8NH56 324 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 OR6X1Q8NH79 312 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms