RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 SYT4Q9H2B2 425 aa15.01□□□□□ -0.01
MDC1-206ENST00000489540 BARX1Q9HBU1 254 aaPredicted RBP15.01□□□□□ -0.01
MDC1-206ENST00000489540 POLE4Q9NR33 117 aa15.01□□□□□ -0.01
MDC1-206ENST00000489540 IL20Q9NYY1 176 aa15.01□□□□□ -0.01
MDC1-206ENST00000489540 FBXO9Q9UK97 447 aaPredicted RBP15.01□□□□□ -0.01
MDC1-206ENST00000489540 TIMM10BQ9Y5J6 103 aa15.01□□□□□ -0.01
MDC1-206ENST00000489540 CDH10Q9Y6N8 788 aa15.01□□□□□ -0.01
MDC1-206ENST00000489540 C12orf71A8MTZ7 269 aa15□□□□□ -0.01
MDC1-206ENST00000489540 B9A039 149 aa15□□□□□ -0.01
MDC1-206ENST00000489540 CTLA4P16410 223 aa15□□□□□ -0.01
MDC1-206ENST00000489540 LAP3P28838 519 aa15□□□□□ -0.01
MDC1-206ENST00000489540 CRABP1P29762 137 aa15□□□□□ -0.01
MDC1-206ENST00000489540 THBS4P35443 961 aa15□□□□□ -0.01
MDC1-206ENST00000489540 COX10Q12887 443 aa15□□□□□ -0.01
MDC1-206ENST00000489540 EFNB3Q15768 340 aa15□□□□□ -0.01
MDC1-206ENST00000489540 ADIPOQQ15848 244 aa15□□□□□ -0.01
MDC1-206ENST00000489540 SWI5Q1ZZU3 235 aa15□□□□□ -0.01
MDC1-206ENST00000489540 MST1LQ2TV78 715 aa15□□□□□ -0.01
MDC1-206ENST00000489540 DNM1P34Q6PK57 102 aa15□□□□□ -0.01
MDC1-206ENST00000489540 SYT9Q86SS6 491 aa15□□□□□ -0.01
MDC1-206ENST00000489540 JAZF1Q86VZ6 243 aa15□□□□□ -0.01
MDC1-206ENST00000489540 OR10G2Q8NGC3 310 aa15□□□□□ -0.01
MDC1-206ENST00000489540 GIPC3Q8TF64 312 aa15□□□□□ -0.01
MDC1-206ENST00000489540 FBXO17Q96EF6 278 aa15□□□□□ -0.01
MDC1-206ENST00000489540 CACNG6Q9BXT2 260 aa15□□□□□ -0.01
MDC1-206ENST00000489540 USF3Q68DE3 2245 aa15□□□□□ -0.01
MDC1-206ENST00000489540 ARRDC5A6NEK1 342 aa15□□□□□ -0.01
MDC1-206ENST00000489540 FKBP6O75344 327 aa15□□□□□ -0.01
MDC1-206ENST00000489540 RENP00797 406 aa15□□□□□ -0.01
MDC1-206ENST00000489540 HIST1H1CP16403 213 aaKnown RBP15□□□□□ -0.01
MDC1-206ENST00000489540 ZNF32P17041 273 aa15□□□□□ -0.01
MDC1-206ENST00000489540 CBX1P83916 185 aa15□□□□□ -0.01
MDC1-206ENST00000489540 SNTB2Q13425 540 aaKnown RBP15□□□□□ -0.01
MDC1-206ENST00000489540 RAB35Q15286 201 aa15□□□□□ -0.01
MDC1-206ENST00000489540 TBC1D28Q2M2D7 210 aa15□□□□□ -0.01
MDC1-206ENST00000489540 PABPC1L2AQ5JQF8 200 aa15□□□□□ -0.01
MDC1-206ENST00000489540 KRT80Q6KB66 452 aa15□□□□□ -0.01
MDC1-206ENST00000489540 CD300LDQ6UXZ3 194 aa15□□□□□ -0.01
MDC1-206ENST00000489540 PTCHD4Q6ZW05 846 aa15□□□□□ -0.01
MDC1-206ENST00000489540 GLB1L2Q8IW92 636 aa15□□□□□ -0.01
MDC1-206ENST00000489540 ALDH16A1Q8IZ83 802 aa15□□□□□ -0.01
MDC1-206ENST00000489540 NUAK2Q9H093 628 aa15□□□□□ -0.01
MDC1-206ENST00000489540 CDH20Q9HBT6 801 aa15□□□□□ -0.01
MDC1-206ENST00000489540 DNAJB9Q9UBS3 223 aa15□□□□□ -0.01
MDC1-206ENST00000489540 CMAHPQ9Y471 501 aa15□□□□□ -0.01
MDC1-206ENST00000489540 ARID1AO14497 2285 aa14.99□□□□□ -0.01
MDC1-206ENST00000489540 H7C417 338 aa14.99□□□□□ -0.01
MDC1-206ENST00000489540 FOSL1P15407 271 aa14.99□□□□□ -0.01
MDC1-206ENST00000489540 APLNRP35414 380 aa14.99□□□□□ -0.01
MDC1-206ENST00000489540 GLRXP35754 106 aa14.99□□□□□ -0.01
MDC1-206ENST00000489540 RPS23P62266 143 aaKnown RBP14.99□□□□□ -0.01
MDC1-206ENST00000489540 SNRPD2P62316 118 aaKnown RBP14.99□□□□□ -0.01
MDC1-206ENST00000489540 PSG4Q00888 419 aa14.99□□□□□ -0.01
MDC1-206ENST00000489540 CLEC12AQ5QGZ9 265 aa14.99□□□□□ -0.01
MDC1-206ENST00000489540 LEG1Q6P5S2 330 aa14.99□□□□□ -0.01
MDC1-206ENST00000489540 CCDC121Q6ZUS5 278 aa14.99□□□□□ -0.01
MDC1-206ENST00000489540 OR4K13Q8NH42 304 aa14.99□□□□□ -0.01
MDC1-206ENST00000489540 NMNAT3Q96T66 252 aa14.99□□□□□ -0.01
MDC1-206ENST00000489540 FEVQ99581 238 aa14.99□□□□□ -0.01
MDC1-206ENST00000489540 ZNF416Q9BWM5 594 aa14.99□□□□□ -0.01
MDC1-206ENST00000489540 RERGLQ9H628 205 aa14.99□□□□□ -0.01
MDC1-206ENST00000489540 EGLN3Q9H6Z9 239 aa14.99□□□□□ -0.01
MDC1-206ENST00000489540 COA3Q9Y2R0 106 aaPredicted RBP14.99□□□□□ -0.01
MDC1-206ENST00000489540 PLCE1Q9P212 2302 aa14.98□□□□□ -0.01
MDC1-206ENST00000489540 BHLHE40O14503 412 aa14.98□□□□□ -0.01
MDC1-206ENST00000489540 E2F6O75461 281 aa14.98□□□□□ -0.01
MDC1-206ENST00000489540 SNAP29O95721 258 aa14.98□□□□□ -0.01
MDC1-206ENST00000489540 SCG5P05408 212 aa14.98□□□□□ -0.01
MDC1-206ENST00000489540 STOMP27105 288 aa14.98□□□□□ -0.01
MDC1-206ENST00000489540 ARHGDIAP52565 204 aa14.98□□□□□ -0.01
MDC1-206ENST00000489540 LSM6P62312 80 aaKnown RBP14.98□□□□□ -0.01
MDC1-206ENST00000489540 GABPB1Q06547 395 aaPredicted RBP14.98□□□□□ -0.01
MDC1-206ENST00000489540 ENDOGQ14249 297 aaKnown RBP14.98□□□□□ -0.01
MDC1-206ENST00000489540 C1orf146Q5VVC0 180 aa14.98□□□□□ -0.01
MDC1-206ENST00000489540 CPEB3Q8NE35 698 aaKnown RBP14.98□□□□□ -0.01
MDC1-206ENST00000489540 SLCO4A1Q96BD0 722 aa14.98□□□□□ -0.01
MDC1-206ENST00000489540 Q96MF0 132 aa14.98□□□□□ -0.01
MDC1-206ENST00000489540 BDH2Q9BUT1 245 aa14.98□□□□□ -0.01
MDC1-206ENST00000489540 OR2H1Q9GZK4 316 aa14.98□□□□□ -0.01
MDC1-206ENST00000489540 PLK3Q9H4B4 646 aa14.98□□□□□ -0.01
MDC1-206ENST00000489540 HEATR1Q9H583 2144 aaKnown RBP14.98□□□□□ -0.01
MDC1-206ENST00000489540 PDP1Q9P0J1 537 aaPredicted RBP14.98□□□□□ -0.01
MDC1-206ENST00000489540 B9D1Q9UPM9 204 aa14.98□□□□□ -0.01
MDC1-206ENST00000489540 BAIAP2Q9UQB8 552 aa14.98□□□□□ -0.01
MDC1-206ENST00000489540 F8P00451 2351 aa14.97□□□□□ -0.01
MDC1-206ENST00000489540 IGHV4-39P01824 125 aa14.97□□□□□ -0.01
MDC1-206ENST00000489540 APEX1P27695 318 aaKnown RBP14.97□□□□□ -0.01
MDC1-206ENST00000489540 PCSK6P29122 969 aa14.97□□□□□ -0.01
MDC1-206ENST00000489540 RAD52P43351 418 aa14.97□□□□□ -0.01
MDC1-206ENST00000489540 EVX1P49640 407 aa14.97□□□□□ -0.01
MDC1-206ENST00000489540 KCNMB1Q16558 191 aa14.97□□□□□ -0.01
MDC1-206ENST00000489540 SLC35F1Q5T1Q4 408 aa14.97□□□□□ -0.01
MDC1-206ENST00000489540 UGT2A3Q6UWM9 527 aa14.97□□□□□ -0.01
MDC1-206ENST00000489540 ASRGL1Q7L266 308 aa14.97□□□□□ -0.01
MDC1-206ENST00000489540 OR6V1Q8N148 313 aa14.97□□□□□ -0.01
MDC1-206ENST00000489540 OR52E2Q8NGJ4 325 aa14.97□□□□□ -0.01
MDC1-206ENST00000489540 TSSK6Q9BXA6 273 aa14.97□□□□□ -0.01
MDC1-206ENST00000489540 PLA2G12AQ9BZM1 189 aa14.97□□□□□ -0.01
MDC1-206ENST00000489540 WNT5BQ9H1J7 359 aa14.97□□□□□ -0.01
MDC1-206ENST00000489540 SRA1Q9HD15 236 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms