RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 FBXO17Q96EF6 278 aa16.17■□□□□ 0.18
PTCD3-217ENST00000488801 MS4A3Q96HJ5 214 aa16.17■□□□□ 0.18
PTCD3-217ENST00000488801 TSSK2Q96PF2 358 aa16.17■□□□□ 0.18
PTCD3-217ENST00000488801 RAB3IPQ96QF0 476 aaPredicted RBP16.17■□□□□ 0.18
PTCD3-217ENST00000488801 RBM4Q9BWF3 364 aaKnown RBP16.17■□□□□ 0.18
PTCD3-217ENST00000488801 MOKQ9UQ07 419 aa16.17■□□□□ 0.18
PTCD3-217ENST00000488801 FKBP7Q9Y680 259 aa16.17■□□□□ 0.18
PTCD3-217ENST00000488801 SLC16A7O60669 478 aa16.16■□□□□ 0.18
PTCD3-217ENST00000488801 TMCC2O75069 709 aa16.16■□□□□ 0.18
PTCD3-217ENST00000488801 KHDRBS3O75525 346 aaKnown RBP16.16■□□□□ 0.18
PTCD3-217ENST00000488801 RAB36O95755 333 aa16.16■□□□□ 0.18
PTCD3-217ENST00000488801 SERPINA5P05154 406 aa16.16■□□□□ 0.18
PTCD3-217ENST00000488801 ZNF35P13682 527 aa16.16■□□□□ 0.18
PTCD3-217ENST00000488801 OSMP13725 252 aa16.16■□□□□ 0.18
PTCD3-217ENST00000488801 LAP3P28838 519 aa16.16■□□□□ 0.18
PTCD3-217ENST00000488801 NOS3P29474 1203 aa16.16■□□□□ 0.18
PTCD3-217ENST00000488801 CRABP1P29762 137 aa16.16■□□□□ 0.18
PTCD3-217ENST00000488801 NKX6-1P78426 367 aaPredicted RBP16.16■□□□□ 0.18
PTCD3-217ENST00000488801 NPRL3Q12980 569 aa16.16■□□□□ 0.18
PTCD3-217ENST00000488801 SLC22A25Q6T423 547 aa16.16■□□□□ 0.18
PTCD3-217ENST00000488801 AMIGO2Q86SJ2 522 aa16.16■□□□□ 0.18
PTCD3-217ENST00000488801 JAZF1Q86VZ6 243 aa16.16■□□□□ 0.18
PTCD3-217ENST00000488801 HIPK1Q86Z02 1210 aa16.16■□□□□ 0.18
PTCD3-217ENST00000488801 OR6V1Q8N148 313 aa16.16■□□□□ 0.18
PTCD3-217ENST00000488801 SVOPLQ8N434 492 aa16.16■□□□□ 0.18
PTCD3-217ENST00000488801 LRRC18Q8N456 261 aa16.16■□□□□ 0.18
PTCD3-217ENST00000488801 NUP37Q8NFH4 326 aa16.16■□□□□ 0.18
PTCD3-217ENST00000488801 IL17RDQ8NFM7 739 aa16.16■□□□□ 0.18
PTCD3-217ENST00000488801 OR52E2Q8NGJ4 325 aa16.16■□□□□ 0.18
PTCD3-217ENST00000488801 TEX47Q8TBZ9 253 aa16.16■□□□□ 0.18
PTCD3-217ENST00000488801 CENPNQ96H22 339 aaPredicted RBP16.16■□□□□ 0.18
PTCD3-217ENST00000488801 WACQ9BTA9 647 aa16.16■□□□□ 0.18
PTCD3-217ENST00000488801 ZNF416Q9BWM5 594 aa16.16■□□□□ 0.18
PTCD3-217ENST00000488801 NMNAT2Q9BZQ4 307 aa16.16■□□□□ 0.18
PTCD3-217ENST00000488801 GRIP2Q9C0E4 1043 aa16.16■□□□□ 0.18
PTCD3-217ENST00000488801 CXXC4Q9H2H0 198 aa16.16■□□□□ 0.18
PTCD3-217ENST00000488801 CISD1Q9NZ45 108 aaKnown RBP16.16■□□□□ 0.18
PTCD3-217ENST00000488801 EDARQ9UNE0 448 aa16.16■□□□□ 0.18
PTCD3-217ENST00000488801 B9D1Q9UPM9 204 aa16.16■□□□□ 0.18
PTCD3-217ENST00000488801 FLNAP21333 2647 aaKnown RBP16.16■□□□□ 0.18
PTCD3-217ENST00000488801 A0A1W2PPL8 197 aa16.15■□□□□ 0.18
PTCD3-217ENST00000488801 RENP00797 406 aa16.15■□□□□ 0.18
PTCD3-217ENST00000488801 CRYAAP02489 173 aa16.15■□□□□ 0.18
PTCD3-217ENST00000488801 SOD3P08294 240 aa16.15■□□□□ 0.18
PTCD3-217ENST00000488801 PAX1P15863 534 aa16.15■□□□□ 0.18
PTCD3-217ENST00000488801 ZNF32P17041 273 aa16.15■□□□□ 0.18
PTCD3-217ENST00000488801 DNASE1P24855 282 aa16.15■□□□□ 0.18
PTCD3-217ENST00000488801 GRK5P34947 590 aa16.15■□□□□ 0.18
PTCD3-217ENST00000488801 ARHGDIAP52565 204 aa16.15■□□□□ 0.18
PTCD3-217ENST00000488801 HGFACQ04756 655 aa16.15■□□□□ 0.18
PTCD3-217ENST00000488801 RAB39AQ14964 217 aa16.15■□□□□ 0.18
PTCD3-217ENST00000488801 SLC35F1Q5T1Q4 408 aa16.15■□□□□ 0.18
PTCD3-217ENST00000488801 KDM4DQ6B0I6 523 aa16.15■□□□□ 0.18
PTCD3-217ENST00000488801 C11orf71Q6IPW1 123 aa16.15■□□□□ 0.18
PTCD3-217ENST00000488801 TMEM53Q6P2H8 277 aa16.15■□□□□ 0.18
PTCD3-217ENST00000488801 DNM1P34Q6PK57 102 aa16.15■□□□□ 0.18
PTCD3-217ENST00000488801 UGT2A3Q6UWM9 527 aa16.15■□□□□ 0.18
PTCD3-217ENST00000488801 SYT9Q86SS6 491 aa16.15■□□□□ 0.18
PTCD3-217ENST00000488801 GLB1L2Q8IW92 636 aa16.15■□□□□ 0.18
PTCD3-217ENST00000488801 SLC37A3Q8NCC5 494 aa16.15■□□□□ 0.18
PTCD3-217ENST00000488801 DHRS9Q9BPW9 319 aa16.15■□□□□ 0.18
PTCD3-217ENST00000488801 FN3KQ9H479 309 aa16.15■□□□□ 0.18
PTCD3-217ENST00000488801 SLC25A19Q9HC21 320 aa16.15■□□□□ 0.18
PTCD3-217ENST00000488801 RPRD1BQ9NQG5 326 aaKnown RBP16.15■□□□□ 0.18
PTCD3-217ENST00000488801 CMC2Q9NRP2 79 aa16.15■□□□□ 0.18
PTCD3-217ENST00000488801 COA3Q9Y2R0 106 aaPredicted RBP16.15■□□□□ 0.18
PTCD3-217ENST00000488801 F8P00451 2351 aa16.15■□□□□ 0.18
PTCD3-217ENST00000488801 OVOL3O00110 214 aa16.14■□□□□ 0.17
PTCD3-217ENST00000488801 SNAP29O95721 258 aa16.14■□□□□ 0.17
PTCD3-217ENST00000488801 CD8AP01732 235 aa16.14■□□□□ 0.17
PTCD3-217ENST00000488801 LSM6P62312 80 aaKnown RBP16.14■□□□□ 0.17
PTCD3-217ENST00000488801 PPP2R2BQ00005 443 aa16.14■□□□□ 0.17
PTCD3-217ENST00000488801 CDK5Q00535 292 aa16.14■□□□□ 0.17
PTCD3-217ENST00000488801 DBPQ10586 325 aaPredicted RBP16.14■□□□□ 0.17
PTCD3-217ENST00000488801 KEAP1Q14145 624 aa16.14■□□□□ 0.17
PTCD3-217ENST00000488801 SGCAQ16586 387 aa16.14■□□□□ 0.17
PTCD3-217ENST00000488801 DEFB113Q30KQ7 82 aa16.14■□□□□ 0.17
PTCD3-217ENST00000488801 ZNF544Q6NX49 715 aa16.14■□□□□ 0.17
PTCD3-217ENST00000488801 IQCF1Q8N6M8 205 aa16.14■□□□□ 0.17
PTCD3-217ENST00000488801 ATG16L2Q8NAA4 619 aa16.14■□□□□ 0.17
PTCD3-217ENST00000488801 SLC26A10Q8NG04 563 aa16.14■□□□□ 0.17
PTCD3-217ENST00000488801 OR4F15Q8NGB8 312 aa16.14■□□□□ 0.17
PTCD3-217ENST00000488801 CCL19Q99731 98 aa16.14■□□□□ 0.17
PTCD3-217ENST00000488801 FOXC2Q99958 501 aa16.14■□□□□ 0.17
PTCD3-217ENST00000488801 TRAF4Q9BUZ4 470 aaPredicted RBP16.14■□□□□ 0.17
PTCD3-217ENST00000488801 C1orf198Q9H425 327 aa16.14■□□□□ 0.17
PTCD3-217ENST00000488801 ZNF556Q9HAH1 456 aa16.14■□□□□ 0.17
PTCD3-217ENST00000488801 EMC7Q9NPA0 242 aa16.14■□□□□ 0.17
PTCD3-217ENST00000488801 BEX4Q9NWD9 120 aaPredicted RBP16.14■□□□□ 0.17
PTCD3-217ENST00000488801 TMEFF2Q9UIK5 374 aaPredicted RBP16.14■□□□□ 0.17
PTCD3-217ENST00000488801 KLHL21Q9UJP4 597 aa16.14■□□□□ 0.17
PTCD3-217ENST00000488801 G3V2T6 193 aa16.13■□□□□ 0.17
PTCD3-217ENST00000488801 H3BN98 237 aa16.13■□□□□ 0.17
PTCD3-217ENST00000488801 ZNF23P17027 643 aa16.13■□□□□ 0.17
PTCD3-217ENST00000488801 TTKP33981 857 aa16.13■□□□□ 0.17
PTCD3-217ENST00000488801 SLC25A1P53007 311 aa16.13■□□□□ 0.17
PTCD3-217ENST00000488801 PSG4Q00888 419 aa16.13■□□□□ 0.17
PTCD3-217ENST00000488801 CRMP1Q14194 572 aa16.13■□□□□ 0.17
PTCD3-217ENST00000488801 PABPC1L2AQ5JQF8 200 aa16.13■□□□□ 0.17
PTCD3-217ENST00000488801 ACSM5Q6NUN0 579 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms