RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 RETP07949 1114 aa1.94□□□□□ -2.1
CD46-215ENST00000488596 PABPC4LP0CB38 370 aaKnown RBP1.94□□□□□ -2.1
CD46-215ENST00000488596 RPS2P15880 293 aaKnown RBP1.94□□□□□ -2.1
CD46-215ENST00000488596 AQP2P41181 271 aa1.94□□□□□ -2.1
CD46-215ENST00000488596 CSNK1A1P48729 337 aa1.94□□□□□ -2.1
CD46-215ENST00000488596 SSR4P51571 173 aa1.94□□□□□ -2.1
CD46-215ENST00000488596 MNAT1P51948 309 aa1.94□□□□□ -2.1
CD46-215ENST00000488596 RND2P52198 227 aa1.94□□□□□ -2.1
CD46-215ENST00000488596 SLC25A11Q02978 314 aaKnown RBP1.94□□□□□ -2.1
CD46-215ENST00000488596 MXD1Q05195 221 aa1.94□□□□□ -2.1
CD46-215ENST00000488596 MAB21L1Q13394 359 aa1.94□□□□□ -2.1
CD46-215ENST00000488596 GINS1Q14691 196 aa1.94□□□□□ -2.1
CD46-215ENST00000488596 RGNQ15493 299 aa1.94□□□□□ -2.1
CD46-215ENST00000488596 STK11Q15831 433 aa1.94□□□□□ -2.1
CD46-215ENST00000488596 ALKBH6Q3KRA9 238 aa1.94□□□□□ -2.1
CD46-215ENST00000488596 HSP90AB3PQ58FF7 597 aa1.94□□□□□ -2.1
CD46-215ENST00000488596 PPM1LQ5SGD2 360 aa1.94□□□□□ -2.1
CD46-215ENST00000488596 FAM92BQ6ZTR7 304 aa1.94□□□□□ -2.1
CD46-215ENST00000488596 HDDC2Q7Z4H3 204 aa1.94□□□□□ -2.1
CD46-215ENST00000488596 ZNF695Q8IW36 515 aa1.94□□□□□ -2.1
CD46-215ENST00000488596 OR4S2Q8NH73 311 aa1.94□□□□□ -2.1
CD46-215ENST00000488596 RAB3IL1Q8TBN0 382 aa1.94□□□□□ -2.1
CD46-215ENST00000488596 FOPNLQ96NB1 174 aa1.94□□□□□ -2.1
CD46-215ENST00000488596 OR2A5Q96R48 311 aa1.94□□□□□ -2.1
CD46-215ENST00000488596 CCDC77Q9BR77 488 aa1.94□□□□□ -2.1
CD46-215ENST00000488596 CHAC1Q9BUX1 264 aa1.94□□□□□ -2.1
CD46-215ENST00000488596 RACGAP1Q9H0H5 632 aa1.94□□□□□ -2.1
CD46-215ENST00000488596 NEUROG2Q9H2A3 272 aa1.94□□□□□ -2.1
CD46-215ENST00000488596 LINC00597Q9H2U6 94 aa1.94□□□□□ -2.1
CD46-215ENST00000488596 OR12D3Q9UGF7 316 aa1.94□□□□□ -2.1
CD46-215ENST00000488596 PITPNC1Q9UKF7 332 aa1.94□□□□□ -2.1
CD46-215ENST00000488596 GOLT1BQ9Y3E0 138 aa1.94□□□□□ -2.1
CD46-215ENST00000488596 TET2Q6N021 2002 aaPredicted RBP1.93□□□□□ -2.1
CD46-215ENST00000488596 IGHV3-66A0A0C4DH42 116 aa1.93□□□□□ -2.1
CD46-215ENST00000488596 GLYATL1P3A0A0U1RQE8 302 aa1.93□□□□□ -2.1
CD46-215ENST00000488596 SMCO3A2RU48 225 aa1.93□□□□□ -2.1
CD46-215ENST00000488596 EIF3HO15372 352 aaKnown RBP eCLIP1.93□□□□□ -2.1
CD46-215ENST00000488596 TROVE2P10155 538 aaKnown RBP eCLIP1.93□□□□□ -2.1
CD46-215ENST00000488596 RAP1AP62834 184 aa1.93□□□□□ -2.1
CD46-215ENST00000488596 TGM3Q08188 693 aa1.93□□□□□ -2.1
CD46-215ENST00000488596 SRSF5Q13243 272 aaKnown RBP1.93□□□□□ -2.1
CD46-215ENST00000488596 RCAN2Q14206 197 aa1.93□□□□□ -2.1
CD46-215ENST00000488596 CHRNA6Q15825 494 aa1.93□□□□□ -2.1
CD46-215ENST00000488596 SNRNP35Q16560 246 aaKnown RBP1.93□□□□□ -2.1
CD46-215ENST00000488596 ARMC12Q5T9G4 340 aa1.93□□□□□ -2.1
CD46-215ENST00000488596 DUX4L9Q6RFH8 374 aaPredicted RBP1.93□□□□□ -2.1
CD46-215ENST00000488596 PLET1Q6UQ28 207 aa1.93□□□□□ -2.1
CD46-215ENST00000488596 C15orf56Q8N910 161 aa1.93□□□□□ -2.1
CD46-215ENST00000488596 PRELID2Q8N945 189 aa1.93□□□□□ -2.1
CD46-215ENST00000488596 OR7G2Q8NG99 324 aa1.93□□□□□ -2.1
CD46-215ENST00000488596 OR10G4Q8NGN3 311 aa1.93□□□□□ -2.1
CD46-215ENST00000488596 OR10J6PQ8NGY7 276 aa1.93□□□□□ -2.1
CD46-215ENST00000488596 LKAAEAR1Q8TD35 194 aa1.93□□□□□ -2.1
CD46-215ENST00000488596 ELMO1Q92556 727 aa1.93□□□□□ -2.1
CD46-215ENST00000488596 CREB3L1Q96BA8 519 aa1.93□□□□□ -2.1
CD46-215ENST00000488596 TSNARE1Q96NA8 513 aa1.93□□□□□ -2.1
CD46-215ENST00000488596 NDFIP1Q9BT67 221 aa1.93□□□□□ -2.1
CD46-215ENST00000488596 ILKAPQ9H0C8 392 aaPredicted RBP1.93□□□□□ -2.1
CD46-215ENST00000488596 NMRK1Q9NWW6 199 aa1.93□□□□□ -2.1
CD46-215ENST00000488596 PTTG3PQ9NZH4 202 aa1.93□□□□□ -2.1
CD46-215ENST00000488596 ARID1AO14497 2285 aa1.93□□□□□ -2.1
CD46-215ENST00000488596 IGKV2-28A0A075B6P5 120 aa1.92□□□□□ -2.1
CD46-215ENST00000488596 CCDC169A6NNP5 214 aa1.92□□□□□ -2.1
CD46-215ENST00000488596 WBP4O75554 376 aaKnown RBP1.92□□□□□ -2.1
CD46-215ENST00000488596 CTDNEP1O95476 244 aa1.92□□□□□ -2.1
CD46-215ENST00000488596 IGKV2D-28P01615 120 aa1.92□□□□□ -2.1
CD46-215ENST00000488596 FTH1P02794 183 aa1.92□□□□□ -2.1
CD46-215ENST00000488596 BCHEP06276 602 aa1.92□□□□□ -2.1
CD46-215ENST00000488596 ACSM4P0C7M7 580 aa1.92□□□□□ -2.1
CD46-215ENST00000488596 IGFBP3P17936 291 aaPredicted RBP1.92□□□□□ -2.1
CD46-215ENST00000488596 ZNF138P52744 262 aa1.92□□□□□ -2.1
CD46-215ENST00000488596 PRMT2P55345 433 aa1.92□□□□□ -2.1
CD46-215ENST00000488596 BEX3Q00994 111 aa1.92□□□□□ -2.1
CD46-215ENST00000488596 LRRC74AQ0VAA2 488 aa1.92□□□□□ -2.1
CD46-215ENST00000488596 TCP10Q12799 353 aa1.92□□□□□ -2.1
CD46-215ENST00000488596 ERCC8Q13216 396 aa1.92□□□□□ -2.1
CD46-215ENST00000488596 EIF4EBP1Q13541 118 aaPredicted RBP1.92□□□□□ -2.1
CD46-215ENST00000488596 RAET1LQ5VY80 246 aa1.92□□□□□ -2.1
CD46-215ENST00000488596 REEP3Q6NUK4 255 aa1.92□□□□□ -2.1
CD46-215ENST00000488596 CEMP1Q6PRD7 247 aaPredicted RBP1.92□□□□□ -2.1
CD46-215ENST00000488596 ARL9Q6T311 187 aa1.92□□□□□ -2.1
CD46-215ENST00000488596 CMTM1Q8IZ96 169 aa1.92□□□□□ -2.1
CD46-215ENST00000488596 TTC5Q8N0Z6 440 aa1.92□□□□□ -2.1
CD46-215ENST00000488596 GTPBP8Q8N3Z3 284 aaPredicted RBP1.92□□□□□ -2.1
CD46-215ENST00000488596 RBMXL1Q96E39 390 aaKnown RBP1.92□□□□□ -2.1
CD46-215ENST00000488596 PANX1Q96RD7 426 aa1.92□□□□□ -2.1
CD46-215ENST00000488596 SLC25A2Q9BXI2 301 aa1.92□□□□□ -2.1
CD46-215ENST00000488596 FAM192AQ9GZU8 254 aa1.92□□□□□ -2.1
CD46-215ENST00000488596 C12orf10Q9HB07 376 aa1.92□□□□□ -2.1
CD46-215ENST00000488596 TMEM9BQ9NQ34 198 aa1.92□□□□□ -2.1
CD46-215ENST00000488596 NECAP2Q9NVZ3 263 aa1.92□□□□□ -2.1
CD46-215ENST00000488596 UVRAGQ9P2Y5 699 aa1.92□□□□□ -2.1
CD46-215ENST00000488596 UXTQ9UBK9 157 aaPredicted RBP1.92□□□□□ -2.1
CD46-215ENST00000488596 ZNF282Q9UDV7 671 aaPredicted RBP1.92□□□□□ -2.1
CD46-215ENST00000488596 IGSF9BQ9UPX0 1349 aa1.91□□□□□ -2.1
CD46-215ENST00000488596 AKNAQ7Z591 1439 aa1.91□□□□□ -2.1
CD46-215ENST00000488596 IGHV3-74A0A0B4J1X5 117 aa1.91□□□□□ -2.1
CD46-215ENST00000488596 CTAGE15A4D2H0 777 aa1.91□□□□□ -2.1
CD46-215ENST00000488596 NUPL2O15504 423 aaKnown RBP1.91□□□□□ -2.1
CD46-215ENST00000488596 KLHL41O60662 606 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms