RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 SLC22A7Q9Y694 548 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 WRBO00258 174 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 TO15178 435 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 ICOSLGO75144 302 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 RAB3DO95716 219 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 WNT11O96014 354 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 TACSTD2P09758 323 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 CSRP1P21291 193 aaKnown RBP12.86□□□□□ -0.35
RER1-207ENST00000488353 CAPZA1P52907 286 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 PLAURQ03405 335 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 NKAPLQ5M9Q1 402 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 SFTPA2Q8IWL1 248 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 OR1J2Q8NGS2 313 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 PATE1Q8WXA2 126 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 ZBTB8AQ96BR9 441 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 PIK3IP1Q96FE7 263 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 WDR92Q96MX6 357 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 ZNF285Q96NJ3 590 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 SMCO4Q9NRQ5 59 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 STARD5Q9NSY2 213 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 CD207Q9UJ71 328 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 ZNF705EA8MWA4 302 aaPredicted RBP12.86□□□□□ -0.35
RER1-207ENST00000488353 SMIM10L1P0DMW3 83 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 HLA-GP17693 338 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 RPS4Y1P22090 263 aaKnown RBP12.86□□□□□ -0.35
RER1-207ENST00000488353 PJVKQ0ZLH3 352 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 FHL1Q13642 323 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 SLC35D3Q5M8T2 416 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 FCRL6Q6DN72 434 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 ZCCHC12Q6PEW1 402 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 FIGLAQ6QHK4 219 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 SAMD14Q8IZD0 417 aaPredicted RBP12.86□□□□□ -0.35
RER1-207ENST00000488353 C15orf54Q8N8G6 183 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 SMRP1Q8NCR6 262 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 OR6K6Q8NGW6 343 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 ZNF417Q8TAU3 575 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 GPX8Q8TED1 209 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 TM4SF19Q96DZ7 209 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 SMIM10Q96HG1 83 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 FBRSQ9HAH7 460 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 ACKR4Q9NPB9 350 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 FLRT3Q9NZU0 649 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 RCC2Q9P258 522 aaKnown RBP12.86□□□□□ -0.35
RER1-207ENST00000488353 FBXO4Q9UKT5 387 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 IER3IP1Q9Y5U9 82 aa12.86□□□□□ -0.35
RER1-207ENST00000488353 F8VVB4 439 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 F8VWA3 439 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 SRPX2O60687 465 aaPredicted RBP12.85□□□□□ -0.35
RER1-207ENST00000488353 NGFRP08138 427 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 EFNB2P52799 333 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 NAAAQ02083 359 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 ATPAF1Q5TC12 328 aaPredicted RBP12.85□□□□□ -0.35
RER1-207ENST00000488353 TMEM200AQ86VY9 491 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 BAP18Q8IXM2 172 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 TMEM229BQ8NBD8 167 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 SLC30A7Q8NEW0 376 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 OR51D1Q8NGF3 324 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 FLVCR1-AS1Q8TAF5 88 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 ZNRF4Q8WWF5 429 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 EDARADDQ8WWZ3 215 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 RNF166Q96A37 237 aaPredicted RBP12.85□□□□□ -0.35
RER1-207ENST00000488353 NRIP2Q9BQI9 281 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 TMEM231Q9H6L2 316 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 TRBV5-5A0A0J9YX44 114 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 EFCAB7A8K855 629 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 C2CD4DB7Z1M9 353 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 OR2T1O43869 369 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 RPP14O95059 124 aaKnown RBP12.85□□□□□ -0.35
RER1-207ENST00000488353 NDUFB2O95178 105 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 HLA-AP01891 365 aaKnown RBP12.85□□□□□ -0.35
RER1-207ENST00000488353 CD74P04233 296 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 ZNF44P15621 663 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 DRD1P21728 446 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 HNRNPA2B1P22626 353 aaKnown RBP12.85□□□□□ -0.35
RER1-207ENST00000488353 EMDP50402 254 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 AIMP2Q13155 320 aaKnown RBP12.85□□□□□ -0.35
RER1-207ENST00000488353 SRSF5Q13243 272 aaKnown RBP12.85□□□□□ -0.35
RER1-207ENST00000488353 ALKBH1Q13686 389 aaKnown RBP12.85□□□□□ -0.35
RER1-207ENST00000488353 GFOD2Q3B7J2 385 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 ZNF542PQ5EBM4 170 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 ZNF684Q5T5D7 378 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 PRAMEF17Q5VTA0 474 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 FAM220AQ7Z4H9 259 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 ZNF561Q8N587 486 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 CDRT4Q8N9R6 151 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 CCDC74AQ96AQ1 378 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 RBM18Q96H35 190 aaKnown RBP12.85□□□□□ -0.35
RER1-207ENST00000488353 Q96M85 177 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 ZNF559Q9BR84 538 aa12.85□□□□□ -0.35
RER1-207ENST00000488353 METTL1Q9UBP6 276 aaKnown RBP12.85□□□□□ -0.35
RER1-207ENST00000488353 TRAV8-7A0A075B6U6 113 aa12.84□□□□□ -0.35
RER1-207ENST00000488353 A0A087WV48 116 aa12.84□□□□□ -0.35
RER1-207ENST00000488353 A0A1B0GWA3 101 aa12.84□□□□□ -0.35
RER1-207ENST00000488353 H0YGG7 62 aa12.84□□□□□ -0.35
RER1-207ENST00000488353 CCSO14618 274 aa12.84□□□□□ -0.35
RER1-207ENST00000488353 SMAD9O15198 467 aaKnown RBP12.84□□□□□ -0.35
RER1-207ENST00000488353 CDC40O60508 579 aaKnown RBP eCLIP12.84□□□□□ -0.35
RER1-207ENST00000488353 NDUFS6O75380 124 aaKnown RBP12.84□□□□□ -0.35
RER1-207ENST00000488353 FARS2O95363 451 aaKnown RBP12.84□□□□□ -0.35
RER1-207ENST00000488353 AMY2AP04746 511 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms