RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 THEM6Q8WUY1 208 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 NSMAFQ92636 917 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 MCHR2Q969V1 340 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 ABHD6Q9BV23 337 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 KCNN2Q9H2S1 579 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 ZDHHC11Q9H8X9 412 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 SLCO1C1Q9NYB5 712 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 FOXD3Q9UJU5 478 aaPredicted RBP8.38□□□□□ -1.07
SF3B1-211ENST00000487698 SSUH2Q9Y2M2 353 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 FLVCR1Q9Y5Y0 555 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 ACACAQ13085 2346 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 A0A075B6Q4 140 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 TRBV2A0A0J9YWF9 115 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 GPRIN2O60269 458 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 CYTIPO60759 359 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 CLEC2LP0C7M8 214 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 DYNC1I2Q13409 638 aaKnown RBP8.38□□□□□ -1.07
SF3B1-211ENST00000487698 EIF2B1Q14232 305 aaKnown RBP8.38□□□□□ -1.07
SF3B1-211ENST00000487698 KCNMB1Q16558 191 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 C10orf128Q5T292 105 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 PDSS1Q5T2R2 415 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 FDX2Q6P4F2 183 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.38□□□□□ -1.07
SF3B1-211ENST00000487698 ZNF679Q8IYX0 411 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 MFSD4AQ8N468 514 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 OR52N5Q8NH56 324 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 NEIL3Q8TAT5 605 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 C11orf40Q8WZ69 217 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 ZNF845Q96IR2 970 aaPredicted RBP8.38□□□□□ -1.07
SF3B1-211ENST00000487698 MAP6Q96JE9 813 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 SMAD5Q99717 465 aaKnown RBP8.38□□□□□ -1.07
SF3B1-211ENST00000487698 PPIL3Q9H2H8 161 aaKnown RBP8.38□□□□□ -1.07
SF3B1-211ENST00000487698 SNTG1Q9NSN8 517 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 GLTPQ9NZD2 209 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 IKZF2Q9UKS7 526 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 RCE1Q9Y256 329 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 UGT2A1Q9Y4X1 527 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 LIPGQ9Y5X9 500 aa8.38□□□□□ -1.07
SF3B1-211ENST00000487698 ANKRD11Q6UB99 2663 aaPredicted RBP8.37□□□□□ -1.07
SF3B1-211ENST00000487698 ACOT7O00154 380 aa8.37□□□□□ -1.07
SF3B1-211ENST00000487698 ZFPL1O95159 310 aa8.37□□□□□ -1.07
SF3B1-211ENST00000487698 ITGB2P05107 769 aa8.37□□□□□ -1.07
SF3B1-211ENST00000487698 QDPRP09417 244 aa8.37□□□□□ -1.07
SF3B1-211ENST00000487698 ZNF823P16415 610 aa8.37□□□□□ -1.07
SF3B1-211ENST00000487698 SPINK2P20155 84 aa8.37□□□□□ -1.07
SF3B1-211ENST00000487698 CSNK1A1P48729 337 aa8.37□□□□□ -1.07
SF3B1-211ENST00000487698 RORCP51449 518 aa8.37□□□□□ -1.07
SF3B1-211ENST00000487698 BCL2A1Q16548 175 aa8.37□□□□□ -1.07
SF3B1-211ENST00000487698 PHYHD1Q5SRE7 291 aa8.37□□□□□ -1.07
SF3B1-211ENST00000487698 KCTD18Q6PI47 426 aaPredicted RBP8.37□□□□□ -1.07
SF3B1-211ENST00000487698 LRRN1Q6UXK5 716 aa8.37□□□□□ -1.07
SF3B1-211ENST00000487698 FOXL2NBQ6ZUU3 175 aa8.37□□□□□ -1.07
SF3B1-211ENST00000487698 TEX19Q8NA77 164 aa8.37□□□□□ -1.07
SF3B1-211ENST00000487698 OR13C5Q8NGS8 318 aa8.37□□□□□ -1.07
SF3B1-211ENST00000487698 ROBO4Q8WZ75 1007 aa8.37□□□□□ -1.07
SF3B1-211ENST00000487698 RGP1Q92546 391 aaPredicted RBP8.37□□□□□ -1.07
SF3B1-211ENST00000487698 PDCD1LG2Q9BQ51 273 aa8.37□□□□□ -1.07
SF3B1-211ENST00000487698 SCNM1Q9BWG6 230 aa8.37□□□□□ -1.07
SF3B1-211ENST00000487698 TIGARQ9NQ88 270 aa8.37□□□□□ -1.07
SF3B1-211ENST00000487698 CYB5R1Q9UHQ9 305 aa8.37□□□□□ -1.07
SF3B1-211ENST00000487698 CFAP47Q6ZTR5 3102 aa8.37□□□□□ -1.07
SF3B1-211ENST00000487698 SPTBN4Q9H254 2564 aa8.37□□□□□ -1.07
SF3B1-211ENST00000487698 A0A087WV48 116 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 IQCMA0A1B0GVH7 501 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 A0A1W2PPL8 197 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 OR4C45A6NMZ5 311 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 KLK10O43240 276 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 RPP14O95059 124 aaKnown RBP8.36□□□□□ -1.07
SF3B1-211ENST00000487698 ACTL6AO96019 429 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 BMP4P12644 408 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 SDHBP21912 280 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 NTF4P34130 210 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 MTNR1BP49286 362 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 SELENOPP49908 381 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 MXD1Q05195 221 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 DCTN2Q13561 401 aaKnown RBP8.36□□□□□ -1.07
SF3B1-211ENST00000487698 ALKBH1Q13686 389 aaKnown RBP8.36□□□□□ -1.07
SF3B1-211ENST00000487698 ZNF829Q3KNS6 432 aaPredicted RBP8.36□□□□□ -1.07
SF3B1-211ENST00000487698 ACSM3Q53FZ2 586 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 FCRLAQ7L513 359 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 DCXRQ7Z4W1 244 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 C20orf196Q8IYI0 205 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 OR2G2Q8NGZ5 317 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 SNIP1Q8TAD8 396 aaKnown RBP8.36□□□□□ -1.07
SF3B1-211ENST00000487698 RNF128Q8TEB7 428 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 RNF133Q8WVZ7 376 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 ABTB1Q969K4 478 aaPredicted RBP8.36□□□□□ -1.07
SF3B1-211ENST00000487698 PNPLA2Q96AD5 504 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 INTS12Q96CB8 462 aaKnown RBP8.36□□□□□ -1.07
SF3B1-211ENST00000487698 MROQ9BYG7 248 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 C6orf62Q9GZU0 229 aaPredicted RBP8.36□□□□□ -1.07
SF3B1-211ENST00000487698 TPK1Q9H3S4 243 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 ELOVL3Q9HB03 270 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 FRRS1LQ9P0K9 344 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 PLEKHB1Q9UF11 243 aaPredicted RBP8.36□□□□□ -1.07
SF3B1-211ENST00000487698 LHFPL6Q9Y693 200 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 URB1O60287 2271 aaKnown RBP8.36□□□□□ -1.07
SF3B1-211ENST00000487698 FRYQ5TBA9 3013 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 IGKV3D-15A0A087WSY6 115 aa8.36□□□□□ -1.07
SF3B1-211ENST00000487698 TRAV17A0A0B4J275 112 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms