RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 SERPINF1P36955 418 aa15.74■□□□□ 0.11
COL1A1-207ENST00000486572 CDKN2AP42771 156 aaKnown RBP15.74■□□□□ 0.11
COL1A1-207ENST00000486572 ERFP50548 548 aa15.74■□□□□ 0.11
COL1A1-207ENST00000486572 GALK2Q01415 458 aa15.74■□□□□ 0.11
COL1A1-207ENST00000486572 HSF2Q03933 536 aa15.74■□□□□ 0.11
COL1A1-207ENST00000486572 ETFDHQ16134 617 aa15.74■□□□□ 0.11
COL1A1-207ENST00000486572 RASSF6Q6ZTQ3 369 aa15.74■□□□□ 0.11
COL1A1-207ENST00000486572 JAZF1Q86VZ6 243 aa15.74■□□□□ 0.11
COL1A1-207ENST00000486572 SLC30A7Q8NEW0 376 aa15.74■□□□□ 0.11
COL1A1-207ENST00000486572 OR10G2Q8NGC3 310 aa15.74■□□□□ 0.11
COL1A1-207ENST00000486572 FBXO17Q96EF6 278 aa15.74■□□□□ 0.11
COL1A1-207ENST00000486572 TMUB1Q9BVT8 246 aa15.74■□□□□ 0.11
COL1A1-207ENST00000486572 DGCR6LQ9BY27 220 aa15.74■□□□□ 0.11
COL1A1-207ENST00000486572 POLE4Q9NR33 117 aa15.74■□□□□ 0.11
COL1A1-207ENST00000486572 ARRDC5A6NEK1 342 aa15.73■□□□□ 0.11
COL1A1-207ENST00000486572 VSTM5A8MXK1 200 aa15.73■□□□□ 0.11
COL1A1-207ENST00000486572 H7C417 338 aa15.73■□□□□ 0.11
COL1A1-207ENST00000486572 IDH3BO43837 385 aa15.73■□□□□ 0.11
COL1A1-207ENST00000486572 KHDRBS3O75525 346 aaKnown RBP15.73■□□□□ 0.11
COL1A1-207ENST00000486572 CD99P14209 185 aa15.73■□□□□ 0.11
COL1A1-207ENST00000486572 GSTM3P21266 225 aa15.73■□□□□ 0.11
COL1A1-207ENST00000486572 THBS4P35443 961 aa15.73■□□□□ 0.11
COL1A1-207ENST00000486572 PCBD1P61457 104 aa15.73■□□□□ 0.11
COL1A1-207ENST00000486572 SNRPD2P62316 118 aaKnown RBP15.73■□□□□ 0.11
COL1A1-207ENST00000486572 CBX1P83916 185 aa15.73■□□□□ 0.11
COL1A1-207ENST00000486572 EFNB3Q15768 340 aa15.73■□□□□ 0.11
COL1A1-207ENST00000486572 SWI5Q1ZZU3 235 aa15.73■□□□□ 0.11
COL1A1-207ENST00000486572 TBC1D28Q2M2D7 210 aa15.73■□□□□ 0.11
COL1A1-207ENST00000486572 PABPC1L2AQ5JQF8 200 aa15.73■□□□□ 0.11
COL1A1-207ENST00000486572 CLEC12AQ5QGZ9 265 aa15.73■□□□□ 0.11
COL1A1-207ENST00000486572 LEG1Q6P5S2 330 aa15.73■□□□□ 0.11
COL1A1-207ENST00000486572 DNM1P34Q6PK57 102 aa15.73■□□□□ 0.11
COL1A1-207ENST00000486572 PAPD5Q8NDF8 572 aaKnown RBP15.73■□□□□ 0.11
COL1A1-207ENST00000486572 Q96MF0 132 aa15.73■□□□□ 0.11
COL1A1-207ENST00000486572 SNX18Q96RF0 628 aa15.73■□□□□ 0.11
COL1A1-207ENST00000486572 NUAK2Q9H093 628 aa15.73■□□□□ 0.11
COL1A1-207ENST00000486572 RERGLQ9H628 205 aa15.73■□□□□ 0.11
COL1A1-207ENST00000486572 BARX1Q9HBU1 254 aaPredicted RBP15.73■□□□□ 0.11
COL1A1-207ENST00000486572 TBC1D23Q9NUY8 699 aa15.73■□□□□ 0.11
COL1A1-207ENST00000486572 IL20Q9NYY1 176 aa15.73■□□□□ 0.11
COL1A1-207ENST00000486572 FLNAP21333 2647 aaKnown RBP15.72■□□□□ 0.11
COL1A1-207ENST00000486572 C12orf71A8MTZ7 269 aa15.72■□□□□ 0.11
COL1A1-207ENST00000486572 B9A039 149 aa15.72■□□□□ 0.11
COL1A1-207ENST00000486572 SNAP29O95721 258 aa15.72■□□□□ 0.11
COL1A1-207ENST00000486572 RENP00797 406 aa15.72■□□□□ 0.11
COL1A1-207ENST00000486572 IGHV4-39P01824 125 aa15.72■□□□□ 0.11
COL1A1-207ENST00000486572 HIST1H1CP16403 213 aaKnown RBP15.72■□□□□ 0.11
COL1A1-207ENST00000486572 CRABP1P29762 137 aa15.72■□□□□ 0.11
COL1A1-207ENST00000486572 RPS23P62266 143 aaKnown RBP15.72■□□□□ 0.11
COL1A1-207ENST00000486572 ENDOGQ14249 297 aaKnown RBP15.72■□□□□ 0.11
COL1A1-207ENST00000486572 MST1LQ2TV78 715 aa15.72■□□□□ 0.11
COL1A1-207ENST00000486572 GLB1L2Q8IW92 636 aa15.72■□□□□ 0.11
COL1A1-207ENST00000486572 OR1J2Q8NGS2 313 aa15.72■□□□□ 0.11
COL1A1-207ENST00000486572 OR4K13Q8NH42 304 aa15.72■□□□□ 0.11
COL1A1-207ENST00000486572 GIPC3Q8TF64 312 aa15.72■□□□□ 0.11
COL1A1-207ENST00000486572 SLCO4A1Q96BD0 722 aa15.72■□□□□ 0.11
COL1A1-207ENST00000486572 FOXN4Q96NZ1 517 aa15.72■□□□□ 0.11
COL1A1-207ENST00000486572 NMNAT3Q96T66 252 aa15.72■□□□□ 0.11
COL1A1-207ENST00000486572 ZNF416Q9BWM5 594 aa15.72■□□□□ 0.11
COL1A1-207ENST00000486572 PLA2G12AQ9BZM1 189 aa15.72■□□□□ 0.11
COL1A1-207ENST00000486572 CDH20Q9HBT6 801 aa15.72■□□□□ 0.11
COL1A1-207ENST00000486572 EMC7Q9NPA0 242 aa15.72■□□□□ 0.11
COL1A1-207ENST00000486572 GDF2Q9UK05 429 aaPredicted RBP15.72■□□□□ 0.11
COL1A1-207ENST00000486572 TIMM10BQ9Y5J6 103 aa15.72■□□□□ 0.11
COL1A1-207ENST00000486572 PMF1-BGLAPU3KQ54 211 aa15.72■□□□□ 0.11
COL1A1-207ENST00000486572 BHLHE40O14503 412 aa15.71■□□□□ 0.11
COL1A1-207ENST00000486572 NDUFS7O75251 213 aa15.71■□□□□ 0.11
COL1A1-207ENST00000486572 E2F6O75461 281 aa15.71■□□□□ 0.11
COL1A1-207ENST00000486572 CCL2P13500 99 aa15.71■□□□□ 0.11
COL1A1-207ENST00000486572 APEX1P27695 318 aaKnown RBP15.71■□□□□ 0.11
COL1A1-207ENST00000486572 APLNRP35414 380 aa15.71■□□□□ 0.11
COL1A1-207ENST00000486572 PSG4Q00888 419 aa15.71■□□□□ 0.11
COL1A1-207ENST00000486572 C1orf146Q5VVC0 180 aa15.71■□□□□ 0.11
COL1A1-207ENST00000486572 CCDC121Q6ZUS5 278 aa15.71■□□□□ 0.11
COL1A1-207ENST00000486572 SYT9Q86SS6 491 aa15.71■□□□□ 0.11
COL1A1-207ENST00000486572 CPEB3Q8NE35 698 aaKnown RBP15.71■□□□□ 0.11
COL1A1-207ENST00000486572 OR8D4Q8NGM9 314 aa15.71■□□□□ 0.11
COL1A1-207ENST00000486572 FEVQ99581 238 aa15.71■□□□□ 0.11
COL1A1-207ENST00000486572 NIPSNAP1Q9BPW8 284 aa15.71■□□□□ 0.11
COL1A1-207ENST00000486572 WACQ9BTA9 647 aa15.71■□□□□ 0.11
COL1A1-207ENST00000486572 OR2H1Q9GZK4 316 aa15.71■□□□□ 0.11
COL1A1-207ENST00000486572 DNAJB9Q9UBS3 223 aa15.71■□□□□ 0.11
COL1A1-207ENST00000486572 COA3Q9Y2R0 106 aaPredicted RBP15.71■□□□□ 0.11
COL1A1-207ENST00000486572 TEP1Q99973 2627 aaKnown RBP15.7■□□□□ 0.1
COL1A1-207ENST00000486572 GPRIN2O60269 458 aa15.7■□□□□ 0.1
COL1A1-207ENST00000486572 SOX14O95416 240 aa15.7■□□□□ 0.1
COL1A1-207ENST00000486572 SCG5P05408 212 aa15.7■□□□□ 0.1
COL1A1-207ENST00000486572 STOMP27105 288 aa15.7■□□□□ 0.1
COL1A1-207ENST00000486572 GLRXP35754 106 aa15.7■□□□□ 0.1
COL1A1-207ENST00000486572 RAB35Q15286 201 aa15.7■□□□□ 0.1
COL1A1-207ENST00000486572 SLC35F1Q5T1Q4 408 aa15.7■□□□□ 0.1
COL1A1-207ENST00000486572 UGT2A3Q6UWM9 527 aa15.7■□□□□ 0.1
COL1A1-207ENST00000486572 CD300LDQ6UXZ3 194 aa15.7■□□□□ 0.1
COL1A1-207ENST00000486572 TMEM179BQ7Z7N9 219 aa15.7■□□□□ 0.1
COL1A1-207ENST00000486572 ALDH16A1Q8IZ83 802 aa15.7■□□□□ 0.1
COL1A1-207ENST00000486572 PAQR4Q8N4S7 273 aaPredicted RBP15.7■□□□□ 0.1
COL1A1-207ENST00000486572 SDR9C7Q8NEX9 313 aa15.7■□□□□ 0.1
COL1A1-207ENST00000486572 OR52E2Q8NGJ4 325 aa15.7■□□□□ 0.1
COL1A1-207ENST00000486572 AKR7LQ8NHP1 331 aa15.7■□□□□ 0.1
COL1A1-207ENST00000486572 TSSK2Q96PF2 358 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms