RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 NPAP1Q9NZP6 1156 aa15.34■□□□□ 0.05
MCF2L-226ENST00000486210 H7C1C5 153 aa15.33■□□□□ 0.04
MCF2L-226ENST00000486210 CASQ2O14958 399 aaPredicted RBP15.33■□□□□ 0.04
MCF2L-226ENST00000486210 AKAP8O43823 692 aaKnown RBP15.33■□□□□ 0.04
MCF2L-226ENST00000486210 SLC43A1O75387 559 aa15.33■□□□□ 0.04
MCF2L-226ENST00000486210 TXNDC12O95881 172 aa15.33■□□□□ 0.04
MCF2L-226ENST00000486210 PGA4P0DJD7 388 aa15.33■□□□□ 0.04
MCF2L-226ENST00000486210 PGA3P0DJD8 388 aa15.33■□□□□ 0.04
MCF2L-226ENST00000486210 ACADSP16219 412 aa15.33■□□□□ 0.04
MCF2L-226ENST00000486210 ZNF16P17020 682 aaPredicted RBP15.33■□□□□ 0.04
MCF2L-226ENST00000486210 PTAFRP25105 342 aa15.33■□□□□ 0.04
MCF2L-226ENST00000486210 SDHAP31040 664 aa15.33■□□□□ 0.04
MCF2L-226ENST00000486210 THBS2P35442 1172 aa15.33■□□□□ 0.04
MCF2L-226ENST00000486210 RPS6KA3P51812 740 aa15.33■□□□□ 0.04
MCF2L-226ENST00000486210 CRISP1P54107 249 aa15.33■□□□□ 0.04
MCF2L-226ENST00000486210 LCN6P62502 163 aa15.33■□□□□ 0.04
MCF2L-226ENST00000486210 RIPK1Q13546 671 aa15.33■□□□□ 0.04
MCF2L-226ENST00000486210 GINS1Q14691 196 aa15.33■□□□□ 0.04
MCF2L-226ENST00000486210 TAF11Q15544 211 aa15.33■□□□□ 0.04
MCF2L-226ENST00000486210 SLC35F1Q5T1Q4 408 aa15.33■□□□□ 0.04
MCF2L-226ENST00000486210 OGFRL1Q5TC84 451 aaPredicted RBP15.33■□□□□ 0.04
MCF2L-226ENST00000486210 TMEM236Q5W0B7 351 aa15.33■□□□□ 0.04
MCF2L-226ENST00000486210 OR7E24Q6IFN5 339 aa15.33■□□□□ 0.04
MCF2L-226ENST00000486210 ACSM5Q6NUN0 579 aa15.33■□□□□ 0.04
MCF2L-226ENST00000486210 SLC22A25Q6T423 547 aa15.33■□□□□ 0.04
MCF2L-226ENST00000486210 TEX47Q8TBZ9 253 aa15.33■□□□□ 0.04
MCF2L-226ENST00000486210 NRG4Q8WWG1 115 aa15.33■□□□□ 0.04
MCF2L-226ENST00000486210 TMEM54Q969K7 222 aa15.33■□□□□ 0.04
MCF2L-226ENST00000486210 SLC25A44Q96H78 314 aaPredicted RBP15.33■□□□□ 0.04
MCF2L-226ENST00000486210 ZNF570Q96NI8 536 aa15.33■□□□□ 0.04
MCF2L-226ENST00000486210 CACNG6Q9BXT2 260 aa15.33■□□□□ 0.04
MCF2L-226ENST00000486210 MRPL13Q9BYD1 178 aaKnown RBP15.33■□□□□ 0.04
MCF2L-226ENST00000486210 GRHPRQ9UBQ7 328 aa15.33■□□□□ 0.04
MCF2L-226ENST00000486210 UPB1Q9UBR1 384 aa15.33■□□□□ 0.04
MCF2L-226ENST00000486210 LPAR3Q9UBY5 353 aa15.33■□□□□ 0.04
MCF2L-226ENST00000486210 M0R3G1 203 aa15.32■□□□□ 0.04
MCF2L-226ENST00000486210 ARPC3O15145 178 aa15.32■□□□□ 0.04
MCF2L-226ENST00000486210 IGHV4-31P0DP07 118 aa15.32■□□□□ 0.04
MCF2L-226ENST00000486210 APEHP13798 732 aaKnown RBP15.32■□□□□ 0.04
MCF2L-226ENST00000486210 HIST1H1CP16403 213 aaKnown RBP15.32■□□□□ 0.04
MCF2L-226ENST00000486210 CDKN2AP42771 156 aaKnown RBP15.32■□□□□ 0.04
MCF2L-226ENST00000486210 CDK5Q00535 292 aa15.32■□□□□ 0.04
MCF2L-226ENST00000486210 MYBPC1Q00872 1141 aa15.32■□□□□ 0.04
MCF2L-226ENST00000486210 DBPQ10586 325 aaPredicted RBP15.32■□□□□ 0.04
MCF2L-226ENST00000486210 KRR1Q13601 381 aaKnown RBP15.32■□□□□ 0.04
MCF2L-226ENST00000486210 ZIK1Q3SY52 487 aaPredicted RBP15.32■□□□□ 0.04
MCF2L-226ENST00000486210 CLEC2AQ6UVW9 174 aa15.32■□□□□ 0.04
MCF2L-226ENST00000486210 PTCHD4Q6ZW05 846 aa15.32■□□□□ 0.04
MCF2L-226ENST00000486210 FBXL14Q8N1E6 418 aa15.32■□□□□ 0.04
MCF2L-226ENST00000486210 GALNT4Q8N4A0 578 aa15.32■□□□□ 0.04
MCF2L-226ENST00000486210 ZNF525Q8N782 197 aa15.32■□□□□ 0.04
MCF2L-226ENST00000486210 SYT14Q8NB59 555 aa15.32■□□□□ 0.04
MCF2L-226ENST00000486210 OR52N5Q8NH56 324 aa15.32■□□□□ 0.04
MCF2L-226ENST00000486210 ZNF566Q969W8 418 aa15.32■□□□□ 0.04
MCF2L-226ENST00000486210 ZNF837Q96EG3 531 aaPredicted RBP15.32■□□□□ 0.04
MCF2L-226ENST00000486210 ALKBH3Q96Q83 286 aaPredicted RBP15.32■□□□□ 0.04
MCF2L-226ENST00000486210 LINC00470Q9BZP3 86 aa15.32■□□□□ 0.04
MCF2L-226ENST00000486210 PLCE1Q9P212 2302 aa15.31■□□□□ 0.04
MCF2L-226ENST00000486210 IGKV1D-43A0A0B4J1Z2 117 aa15.31■□□□□ 0.04
MCF2L-226ENST00000486210 SLC2A10O95528 541 aa15.31■□□□□ 0.04
MCF2L-226ENST00000486210 IGHG1P01857 330 aa15.31■□□□□ 0.04
MCF2L-226ENST00000486210 GIPRP48546 466 aa15.31■□□□□ 0.04
MCF2L-226ENST00000486210 CSNK1A1P48729 337 aa15.31■□□□□ 0.04
MCF2L-226ENST00000486210 ZNF83P51522 516 aa15.31■□□□□ 0.04
MCF2L-226ENST00000486210 ESRRGP62508 458 aa15.31■□□□□ 0.04
MCF2L-226ENST00000486210 TGFBR3Q03167 851 aa15.31■□□□□ 0.04
MCF2L-226ENST00000486210 PTGES3Q15185 160 aaKnown RBP15.31■□□□□ 0.04
MCF2L-226ENST00000486210 ZNF362Q5T0B9 420 aaPredicted RBP15.31■□□□□ 0.04
MCF2L-226ENST00000486210 C9orf135Q5VTT2 229 aa15.31■□□□□ 0.04
MCF2L-226ENST00000486210 GPR139Q6DWJ6 353 aa15.31■□□□□ 0.04
MCF2L-226ENST00000486210 LNX2Q8N448 690 aa15.31■□□□□ 0.04
MCF2L-226ENST00000486210 NOXO1Q8NFA2 376 aa15.31■□□□□ 0.04
MCF2L-226ENST00000486210 OR2T33Q8NG76 320 aa15.31■□□□□ 0.04
MCF2L-226ENST00000486210 OR6N1Q8NGY5 312 aa15.31■□□□□ 0.04
MCF2L-226ENST00000486210 OR4K13Q8NH42 304 aa15.31■□□□□ 0.04
MCF2L-226ENST00000486210 NMD3Q96D46 503 aaKnown RBP15.31■□□□□ 0.04
MCF2L-226ENST00000486210 LRR1Q96L50 414 aa15.31■□□□□ 0.04
MCF2L-226ENST00000486210 MBOAT4Q96T53 435 aa15.31■□□□□ 0.04
MCF2L-226ENST00000486210 SHARPINQ9H0F6 387 aa15.31■□□□□ 0.04
MCF2L-226ENST00000486210 RIBC2Q9H4K1 309 aa15.31■□□□□ 0.04
MCF2L-226ENST00000486210 GLTPQ9NZD2 209 aa15.31■□□□□ 0.04
MCF2L-226ENST00000486210 MALT1Q9UDY8 824 aa15.31■□□□□ 0.04
MCF2L-226ENST00000486210 A6NIZ1 184 aa15.3■□□□□ 0.04
MCF2L-226ENST00000486210 E7EQL1 145 aa15.3■□□□□ 0.04
MCF2L-226ENST00000486210 M0R1B8 84 aa15.3■□□□□ 0.04
MCF2L-226ENST00000486210 DLGAP1O14490 977 aa15.3■□□□□ 0.04
MCF2L-226ENST00000486210 ITGA5P08648 1049 aa15.3■□□□□ 0.04
MCF2L-226ENST00000486210 BMP4P12644 408 aa15.3■□□□□ 0.04
MCF2L-226ENST00000486210 TTKP33981 857 aa15.3■□□□□ 0.04
MCF2L-226ENST00000486210 CLRN1P58418 232 aa15.3■□□□□ 0.04
MCF2L-226ENST00000486210 DSCR9P59020 149 aa15.3■□□□□ 0.04
MCF2L-226ENST00000486210 RAP1BP61224 184 aa15.3■□□□□ 0.04
MCF2L-226ENST00000486210 RAP1AP62834 184 aa15.3■□□□□ 0.04
MCF2L-226ENST00000486210 FMODQ06828 376 aa15.3■□□□□ 0.04
MCF2L-226ENST00000486210 NPRL3Q12980 569 aa15.3■□□□□ 0.04
MCF2L-226ENST00000486210 HIST3H3Q16695 136 aa15.3■□□□□ 0.04
MCF2L-226ENST00000486210 FAM205BPQ63HN1 556 aa15.3■□□□□ 0.04
MCF2L-226ENST00000486210 CYB5R2Q6BCY4 276 aa15.3■□□□□ 0.04
MCF2L-226ENST00000486210 LRFN4Q6PJG9 635 aa15.3■□□□□ 0.04
MCF2L-226ENST00000486210 KLHL24Q6TFL4 600 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms