RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 LOC100130705A0A1B0GUX0 176 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 SLC22A23A1A5C7 686 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 OR6C68A6NDL8 312 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 TVP23AA6NH52 213 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 OR6C65A6NJZ3 312 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 ZAR1LA6NP61 321 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 A8MXE2 369 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 C19orf84I3L1E1 186 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 ARPC3O15145 178 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 SURF4O15260 269 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 IDH3BO43837 385 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 PRKYO43930 277 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 KHDRBS3O75525 346 aaKnown RBP4.94□□□□□ -1.62
COPS3-208ENST00000486032 MPZL1O95297 269 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 TXNDC12O95881 172 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 ITGA5P08648 1049 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 PATE4P0C8F1 98 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 CD79AP11912 226 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 APEHP13798 732 aaKnown RBP4.94□□□□□ -1.62
COPS3-208ENST00000486032 B4GALT1P15291 398 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 CTLA4P16410 223 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 ZNF3P17036 446 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 EPHA1P21709 976 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 PAICSP22234 425 aaKnown RBP4.94□□□□□ -1.62
COPS3-208ENST00000486032 MPGP29372 298 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 HOXC12P31275 282 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 CD79BP40259 229 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 VHLP40337 213 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 GUCA1AP43080 201 aaPredicted RBP4.94□□□□□ -1.62
COPS3-208ENST00000486032 CDC42P60953 191 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 PIGFQ07326 219 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 HIKESHIQ53FT3 197 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 SFRP5Q5T4F7 317 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 C6orf52Q5T4I8 152 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 SLX4IPQ5VYV7 408 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 FAM205BPQ63HN1 556 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 C12orf73Q69YU5 71 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 CDPF1Q6NVV7 123 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 LRFN4Q6PJG9 635 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 DNM1P34Q6PK57 102 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 KLHL24Q6TFL4 600 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 IZUMO2Q6UXV1 221 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 B3GLCTQ6Y288 498 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 STAC2Q6ZMT1 411 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 CXXC5Q7LFL8 322 aaKnown RBP4.94□□□□□ -1.62
COPS3-208ENST00000486032 BHLHA15Q7RTS1 189 aaPredicted RBP4.94□□□□□ -1.62
COPS3-208ENST00000486032 ADCK1Q86TW2 530 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 CPOQ8IVL8 374 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 LNX2Q8N448 690 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 LRRC18Q8N456 261 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 PACRGLQ8N7B6 248 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 PROKR2Q8NFJ6 384 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 BBS1Q8NFJ9 593 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 OR1K1Q8NGR3 316 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 OR6K6Q8NGW6 343 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 OR52N5Q8NH56 324 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 LINC01560Q8TB33 94 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 RNASE6Q93091 150 aaKnown RBP4.94□□□□□ -1.62
COPS3-208ENST00000486032 S100PBPQ96BU1 408 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 FOXB1Q99853 325 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 SH3GL3Q99963 347 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 ALG12Q9BV10 488 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 HCAR1Q9BXC0 346 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 GABARAPL3Q9BY60 117 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 MRPL13Q9BYD1 178 aaKnown RBP4.94□□□□□ -1.62
COPS3-208ENST00000486032 PRRG3Q9BZD7 231 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 LINC00470Q9BZP3 86 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 RNF121Q9H920 327 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 EMC7Q9NPA0 242 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 HINT3Q9NQE9 182 aaKnown RBP4.94□□□□□ -1.62
COPS3-208ENST00000486032 CMC2Q9NRP2 79 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 FAM118AQ9NWS6 357 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 DNAJC27Q9NZQ0 273 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 H2AFY2Q9P0M6 372 aaPredicted RBP4.94□□□□□ -1.62
COPS3-208ENST00000486032 FOXD3Q9UJU5 478 aaPredicted RBP4.94□□□□□ -1.62
COPS3-208ENST00000486032 B9D1Q9UPM9 204 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 COA3Q9Y2R0 106 aaPredicted RBP4.94□□□□□ -1.62
COPS3-208ENST00000486032 POLR1DQ9Y2S0 133 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 POLEQ07864 2286 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 CSMD1Q96PZ7 3565 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 ALPK2Q86TB3 2170 aa4.94□□□□□ -1.62
COPS3-208ENST00000486032 NCOA6Q14686 2063 aaPredicted RBP4.93□□□□□ -1.62
COPS3-208ENST00000486032 USP9YO00507 2555 aaPredicted RBP4.93□□□□□ -1.62
COPS3-208ENST00000486032 NPIPB13A6NJU9 1138 aa4.93□□□□□ -1.62
COPS3-208ENST00000486032 ZNF99A8MXY4 864 aaPredicted RBP4.93□□□□□ -1.62
COPS3-208ENST00000486032 NPIPB4C9JG80 1138 aa4.93□□□□□ -1.62
COPS3-208ENST00000486032 NPIPB6E9PJ23 425 aa4.93□□□□□ -1.62
COPS3-208ENST00000486032 C16orf97H3BN30 126 aa4.93□□□□□ -1.62
COPS3-208ENST00000486032 DCTN6O00399 190 aa4.93□□□□□ -1.62
COPS3-208ENST00000486032 DLGAP1O14490 977 aa4.93□□□□□ -1.62
COPS3-208ENST00000486032 APOL3O95236 402 aa4.93□□□□□ -1.62
COPS3-208ENST00000486032 FARS2O95363 451 aaKnown RBP4.93□□□□□ -1.62
COPS3-208ENST00000486032 SCG5P05408 212 aa4.93□□□□□ -1.62
COPS3-208ENST00000486032 MRPL3P09001 348 aaKnown RBP4.93□□□□□ -1.62
COPS3-208ENST00000486032 NR2C1P13056 603 aa4.93□□□□□ -1.62
COPS3-208ENST00000486032 SPI1P17947 270 aa4.93□□□□□ -1.62
COPS3-208ENST00000486032 LAP3P28838 519 aa4.93□□□□□ -1.62
COPS3-208ENST00000486032 CRABP1P29762 137 aa4.93□□□□□ -1.62
COPS3-208ENST00000486032 FBN2P35556 2912 aa4.93□□□□□ -1.62
COPS3-208ENST00000486032 GGT2P36268 569 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms