RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 MPDZO75970 2070 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 MED12LQ86YW9 2145 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 PKDREJQ9NTG1 2253 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 APCP25054 2843 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 TRDV1A0A1B0GX56 115 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 OR6C68A6NDL8 312 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 METTL15A6NJ78 407 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 J3QLW9 94 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 ETV2O00321 342 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-216ENST00000484087 AQP7O14520 342 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 PHYHO14832 338 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 TOXO94900 526 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 SNX4O95219 450 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 SERPINA3P01011 423 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 IL1AP01583 271 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 TACSTD2P09758 323 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 GLI4P10075 376 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 ZNF19P17023 458 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 FGF9P31371 208 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-216ENST00000484087 ACVR1BP36896 505 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 OPRL1P41146 370 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 CDKN2AP42771 156 aaKnown RBP6.17□□□□□ -1.42
BRCA1-216ENST00000484087 CRYBB2P43320 205 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 DAP3P51398 398 aaKnown RBP6.17□□□□□ -1.42
BRCA1-216ENST00000484087 BMXP51813 675 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 GBX2P52951 348 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-216ENST00000484087 RPL27P61353 136 aaKnown RBP6.17□□□□□ -1.42
BRCA1-216ENST00000484087 MRPL28Q13084 256 aaKnown RBP6.17□□□□□ -1.42
BRCA1-216ENST00000484087 SELENBP1Q13228 472 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 OR7A5Q15622 319 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 PLPPR5Q32ZL2 321 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 FAM205BPQ63HN1 556 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 TIGD3Q6B0B8 471 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 DNM1P34Q6PK57 102 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 ARSKQ6UWY0 536 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 H1FNTQ75WM6 255 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-216ENST00000484087 FAM122BQ7Z309 247 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 FAM220AQ7Z4H9 259 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 ZBTB46Q86UZ6 589 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 EGFL6Q8IUX8 553 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 INTS1Q8N201 2190 aaKnown RBP6.17□□□□□ -1.42
BRCA1-216ENST00000484087 SYS1Q8N2H4 156 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 ARIH2OSQ8N7S6 290 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 TMEM99Q8N816 258 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 OR2M3Q8NG83 312 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 OR51L1Q8NGJ5 315 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 OR14L1PQ8NHC6 308 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 NEIL3Q8TAT5 605 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 AP3S1Q92572 193 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 TMEM203Q969S6 136 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 NTNG2Q96CW9 530 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 TMEM41AQ96HV5 264 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 C4orf36Q96KX1 117 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 DACH2Q96NX9 599 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 TSPAN32Q96QS1 320 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 SNX18Q96RF0 628 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 SH3GL3Q99963 347 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 PTDSS2Q9BVG9 487 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 TMED9Q9BVK6 235 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 SLIRPQ9GZT3 109 aaKnown RBP6.17□□□□□ -1.42
BRCA1-216ENST00000484087 TP63Q9H3D4 680 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-216ENST00000484087 TXNIPQ9H3M7 391 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 RERGLQ9H628 205 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 RPRD1BQ9NQG5 326 aaKnown RBP6.17□□□□□ -1.42
BRCA1-216ENST00000484087 TXNL4BQ9NX01 149 aaKnown RBP6.17□□□□□ -1.42
BRCA1-216ENST00000484087 GALNT8Q9NY28 637 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 TAS2R5Q9NYW4 299 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 B4GALT7Q9UBV7 327 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 ZNF346Q9UL40 294 aaKnown RBP6.17□□□□□ -1.42
BRCA1-216ENST00000484087 CAMK2AQ9UQM7 478 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 B3GALT5Q9Y2C3 310 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 TMA7Q9Y2S6 64 aaKnown RBP6.17□□□□□ -1.42
BRCA1-216ENST00000484087 TMEM14AQ9Y6G1 99 aa6.17□□□□□ -1.42
BRCA1-216ENST00000484087 AKAP9Q99996 3911 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 POLQO75417 2590 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 A0A0G2JNJ9 132 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 A0A1B0GVC2 190 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 A0A1W2PQL4 384 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-216ENST00000484087 CENPBD1B2RD01 187 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 E9PLN8 166 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 H3BML4 177 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 PLPP3O14495 311 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 CASKO14936 926 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 SEC14L5O43304 696 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 RGS9O75916 674 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-216ENST00000484087 CDRT1O95170 752 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 IGHMP01871 453 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 HLA-DQA2P01906 255 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 OPN1LWP04000 364 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 HPNP05981 417 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 CALRP27797 417 aaKnown RBP6.16□□□□□ -1.42
BRCA1-216ENST00000484087 CRABP1P29762 137 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 PYCR1P32322 319 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 TGFBR1P36897 503 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 NAA10P41227 235 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-216ENST00000484087 DSCR4P56555 118 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-216ENST00000484087 RPS25P62851 125 aaKnown RBP6.16□□□□□ -1.42
BRCA1-216ENST00000484087 PUDPQ08623 228 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 ZP4Q12836 540 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 MESTQ5EB52 335 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms