RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 PRKCDQ05655 676 aa15.83■□□□□ 0.12
CLK1-211ENST00000481641 TSTQ16762 297 aaKnown RBP15.83■□□□□ 0.12
CLK1-211ENST00000481641 THEM4Q5T1C6 240 aa15.83■□□□□ 0.12
CLK1-211ENST00000481641 AVPI1Q5T686 147 aa15.83■□□□□ 0.12
CLK1-211ENST00000481641 OFCC1Q8IZS5 231 aa15.83■□□□□ 0.12
CLK1-211ENST00000481641 OR13C2Q8NGS9 318 aa15.83■□□□□ 0.12
CLK1-211ENST00000481641 RP9Q8TA86 221 aaKnown RBP15.83■□□□□ 0.12
CLK1-211ENST00000481641 RBP7Q96R05 134 aa15.83■□□□□ 0.12
CLK1-211ENST00000481641 ALG12Q9BV10 488 aa15.83■□□□□ 0.12
CLK1-211ENST00000481641 WNT5BQ9H1J7 359 aa15.83■□□□□ 0.12
CLK1-211ENST00000481641 SLCO1C1Q9NYB5 712 aa15.83■□□□□ 0.12
CLK1-211ENST00000481641 GPR160Q9UJ42 338 aa15.83■□□□□ 0.12
CLK1-211ENST00000481641 A0A1W2PPL8 197 aa15.82■□□□□ 0.12
CLK1-211ENST00000481641 EFCAB9A8MZ26 197 aa15.82■□□□□ 0.12
CLK1-211ENST00000481641 H7C1C5 153 aa15.82■□□□□ 0.12
CLK1-211ENST00000481641 GSTA4O15217 222 aa15.82■□□□□ 0.12
CLK1-211ENST00000481641 SLC22A2O15244 555 aa15.82■□□□□ 0.12
CLK1-211ENST00000481641 IGHMP01871 453 aa15.82■□□□□ 0.12
CLK1-211ENST00000481641 SCG5P05408 212 aa15.82■□□□□ 0.12
CLK1-211ENST00000481641 DRD4P21917 467 aa15.82■□□□□ 0.12
CLK1-211ENST00000481641 IFNA8P32881 189 aa15.82■□□□□ 0.12
CLK1-211ENST00000481641 LMO4P61968 165 aa15.82■□□□□ 0.12
CLK1-211ENST00000481641 LCN6P62502 163 aa15.82■□□□□ 0.12
CLK1-211ENST00000481641 MRPS11P82912 194 aaKnown RBP15.82■□□□□ 0.12
CLK1-211ENST00000481641 MVKQ03426 396 aa15.82■□□□□ 0.12
CLK1-211ENST00000481641 TRAM2Q15035 370 aa15.82■□□□□ 0.12
CLK1-211ENST00000481641 TAF11Q15544 211 aa15.82■□□□□ 0.12
CLK1-211ENST00000481641 FAM27BQ5VT28 67 aa15.82■□□□□ 0.12
CLK1-211ENST00000481641 GLCCI1Q86VQ1 547 aa15.82■□□□□ 0.12
CLK1-211ENST00000481641 ZNF416Q9BWM5 594 aa15.82■□□□□ 0.12
CLK1-211ENST00000481641 OR2H1Q9GZK4 316 aa15.82■□□□□ 0.12
CLK1-211ENST00000481641 CCDC134Q9H6E4 229 aa15.82■□□□□ 0.12
CLK1-211ENST00000481641 HIF1ANQ9NWT6 349 aa15.82■□□□□ 0.12
CLK1-211ENST00000481641 CACNG2Q9Y698 323 aa15.82■□□□□ 0.12
CLK1-211ENST00000481641 A0A087WUU8 490 aa15.81■□□□□ 0.12
CLK1-211ENST00000481641 TPD52L2O43399 206 aaKnown RBP15.81■□□□□ 0.12
CLK1-211ENST00000481641 SERPINA1P01009 418 aa15.81■□□□□ 0.12
CLK1-211ENST00000481641 IGHV3-13P01766 116 aa15.81■□□□□ 0.12
CLK1-211ENST00000481641 GAAP10253 952 aa15.81■□□□□ 0.12
CLK1-211ENST00000481641 NCK1P16333 377 aa15.81■□□□□ 0.12
CLK1-211ENST00000481641 GPR4P46093 362 aa15.81■□□□□ 0.12
CLK1-211ENST00000481641 GSK3BP49841 420 aa15.81■□□□□ 0.12
CLK1-211ENST00000481641 GDI2P50395 445 aaKnown RBP15.81■□□□□ 0.12
CLK1-211ENST00000481641 IFI44LQ53G44 452 aa15.81■□□□□ 0.12
CLK1-211ENST00000481641 ZNF774Q6NX45 483 aa15.81■□□□□ 0.12
CLK1-211ENST00000481641 UGT2A3Q6UWM9 527 aa15.81■□□□□ 0.12
CLK1-211ENST00000481641 ZNF730Q6ZMV8 503 aa15.81■□□□□ 0.12
CLK1-211ENST00000481641 USP51Q70EK9 711 aa15.81■□□□□ 0.12
CLK1-211ENST00000481641 FKBP9P1Q75LS8 142 aa15.81■□□□□ 0.12
CLK1-211ENST00000481641 CBLL1Q75N03 491 aa15.81■□□□□ 0.12
CLK1-211ENST00000481641 ARPINQ7Z6K5 226 aa15.81■□□□□ 0.12
CLK1-211ENST00000481641 OAFQ86UD1 273 aa15.81■□□□□ 0.12
CLK1-211ENST00000481641 TREML1Q86YW5 311 aa15.81■□□□□ 0.12
CLK1-211ENST00000481641 SLC25A40Q8TBP6 338 aa15.81■□□□□ 0.12
CLK1-211ENST00000481641 IPCEF1Q8WWN9 437 aaPredicted RBP15.81■□□□□ 0.12
CLK1-211ENST00000481641 GEMIN6Q8WXD5 167 aaKnown RBP15.81■□□□□ 0.12
CLK1-211ENST00000481641 MARS2Q96GW9 593 aaKnown RBP15.81■□□□□ 0.12
CLK1-211ENST00000481641 HSH2DQ96JZ2 352 aa15.81■□□□□ 0.12
CLK1-211ENST00000481641 OR2J1Q9GZK6 312 aa15.81■□□□□ 0.12
CLK1-211ENST00000481641 CDC42EP2O14613 210 aa15.8■□□□□ 0.12
CLK1-211ENST00000481641 SPRY3O43610 288 aa15.8■□□□□ 0.12
CLK1-211ENST00000481641 PRSS23O95084 383 aa15.8■□□□□ 0.12
CLK1-211ENST00000481641 NGFP01138 241 aa15.8■□□□□ 0.12
CLK1-211ENST00000481641 TFP02787 698 aa15.8■□□□□ 0.12
CLK1-211ENST00000481641 CST2P09228 141 aa15.8■□□□□ 0.12
CLK1-211ENST00000481641 NR2C1P13056 603 aa15.8■□□□□ 0.12
CLK1-211ENST00000481641 ZNF26P17031 533 aaPredicted RBP15.8■□□□□ 0.12
CLK1-211ENST00000481641 CRYBB2P43320 205 aa15.8■□□□□ 0.12
CLK1-211ENST00000481641 HNRNPA0Q13151 305 aaKnown RBP15.8■□□□□ 0.12
CLK1-211ENST00000481641 ENDOGQ14249 297 aaKnown RBP15.8■□□□□ 0.12
CLK1-211ENST00000481641 PCGF3Q3KNV8 242 aa15.8■□□□□ 0.12
CLK1-211ENST00000481641 ZNF718Q3SXZ3 478 aa15.8■□□□□ 0.12
CLK1-211ENST00000481641 C8orf82Q6P1X6 216 aaPredicted RBP15.8■□□□□ 0.12
CLK1-211ENST00000481641 FOXL2NBQ6ZUU3 175 aa15.8■□□□□ 0.12
CLK1-211ENST00000481641 RFPL4BQ6ZWI9 263 aa15.8■□□□□ 0.12
CLK1-211ENST00000481641 TSEN54Q7Z6J9 526 aaKnown RBP15.8■□□□□ 0.12
CLK1-211ENST00000481641 ABHD4Q8TB40 342 aa15.8■□□□□ 0.12
CLK1-211ENST00000481641 ACOT11Q8WXI4 607 aaPredicted RBP15.8■□□□□ 0.12
CLK1-211ENST00000481641 TMEM186Q96B77 213 aa15.8■□□□□ 0.12
CLK1-211ENST00000481641 EMC7Q9NPA0 242 aa15.8■□□□□ 0.12
CLK1-211ENST00000481641 DECR2Q9NUI1 292 aa15.8■□□□□ 0.12
CLK1-211ENST00000481641 NKIRAS2Q9NYR9 191 aa15.8■□□□□ 0.12
CLK1-211ENST00000481641 EIF3KQ9UBQ5 218 aaKnown RBP15.8■□□□□ 0.12
CLK1-211ENST00000481641 AP3M1Q9Y2T2 418 aa15.8■□□□□ 0.12
CLK1-211ENST00000481641 ADAM18Q9Y3Q7 739 aa15.8■□□□□ 0.12
CLK1-211ENST00000481641 IGHV1-69-2A0A0G2JMI3 117 aa15.79■□□□□ 0.12
CLK1-211ENST00000481641 HTR3EA5X5Y0 456 aa15.79■□□□□ 0.12
CLK1-211ENST00000481641 GMNCA6NCL1 334 aa15.79■□□□□ 0.12
CLK1-211ENST00000481641 IGHV1-46P01743 117 aa15.79■□□□□ 0.12
CLK1-211ENST00000481641 MSMBP08118 114 aa15.79■□□□□ 0.12
CLK1-211ENST00000481641 GCH1P30793 250 aa15.79■□□□□ 0.12
CLK1-211ENST00000481641 ZNF81P51508 661 aa15.79■□□□□ 0.12
CLK1-211ENST00000481641 OTPQ5XKR4 325 aa15.79■□□□□ 0.12
CLK1-211ENST00000481641 MBOAT2Q6ZWT7 520 aa15.79■□□□□ 0.12
CLK1-211ENST00000481641 KLF14Q8TD94 323 aaPredicted RBP15.79■□□□□ 0.12
CLK1-211ENST00000481641 LRRC37BQ96QE4 947 aa15.79■□□□□ 0.12
CLK1-211ENST00000481641 TIMM10BQ9Y5J6 103 aa15.79■□□□□ 0.12
CLK1-211ENST00000481641 A6NIZ1 184 aa15.78■□□□□ 0.12
CLK1-211ENST00000481641 ZSCAN5BA6NJL1 495 aa15.78■□□□□ 0.12
CLK1-211ENST00000481641 TCF21O43680 179 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms