RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 RAP1BP61224 184 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 RPL27P61353 136 aaKnown RBP12.64□□□□□ -0.39
USP11-207ENST00000478596 ESRRGP62508 458 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 RAP1AP62834 184 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 BSPH1Q075Z2 132 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 PDK3Q15120 406 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 RAB35Q15286 201 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 MS4A18Q3C1V0 323 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 C11orf71Q6IPW1 123 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 CREB3L2Q70SY1 520 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 PARP8Q8N3A8 854 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 OR8D4Q8NGM9 314 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 S100PBPQ96BU1 408 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 RASD2Q96D21 266 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 ZNF385AQ96PM9 386 aaKnown RBP12.64□□□□□ -0.39
USP11-207ENST00000478596 SLC38A2Q96QD8 506 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 TSPAN32Q96QS1 320 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 EMC6Q9BV81 110 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 TXNIPQ9H3M7 391 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 TOR3AQ9H497 397 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 BCO1Q9HAY6 547 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 GP6Q9HCN6 339 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 PARPBPQ9NWS1 579 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 IMPAD1Q9NX62 359 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 B3GAT1Q9P2W7 334 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 UPB1Q9UBR1 384 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 BAIAP2Q9UQB8 552 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 RCE1Q9Y256 329 aa12.64□□□□□ -0.39
USP11-207ENST00000478596 PRR14LQ5THK1 2151 aa12.63□□□□□ -0.39
USP11-207ENST00000478596 IGKV3D-15A0A087WSY6 115 aa12.63□□□□□ -0.39
USP11-207ENST00000478596 VWC2LB2RUY7 222 aa12.63□□□□□ -0.39
USP11-207ENST00000478596 RENP00797 406 aa12.63□□□□□ -0.39
USP11-207ENST00000478596 NR2C1P13056 603 aa12.63□□□□□ -0.39
USP11-207ENST00000478596 SDHAP31040 664 aa12.63□□□□□ -0.39
USP11-207ENST00000478596 SRP14P37108 136 aaKnown RBP12.63□□□□□ -0.39
USP11-207ENST00000478596 PTDSS1P48651 473 aaKnown RBP12.63□□□□□ -0.39
USP11-207ENST00000478596 CSNK1A1P48729 337 aa12.63□□□□□ -0.39
USP11-207ENST00000478596 CRISP1P54107 249 aa12.63□□□□□ -0.39
USP11-207ENST00000478596 ITGADQ13349 1161 aa12.63□□□□□ -0.39
USP11-207ENST00000478596 CAMK2DQ13557 499 aa12.63□□□□□ -0.39
USP11-207ENST00000478596 GINS1Q14691 196 aa12.63□□□□□ -0.39
USP11-207ENST00000478596 SLC35F1Q5T1Q4 408 aa12.63□□□□□ -0.39
USP11-207ENST00000478596 GPR139Q6DWJ6 353 aa12.63□□□□□ -0.39
USP11-207ENST00000478596 GPR137CQ8N3F9 429 aa12.63□□□□□ -0.39
USP11-207ENST00000478596 NOXO1Q8NFA2 376 aa12.63□□□□□ -0.39
USP11-207ENST00000478596 FAM216AQ8WUB2 273 aa12.63□□□□□ -0.39
USP11-207ENST00000478596 ASB10Q8WXI3 467 aa12.63□□□□□ -0.39
USP11-207ENST00000478596 ZNF566Q969W8 418 aa12.63□□□□□ -0.39
USP11-207ENST00000478596 GPX7Q96SL4 187 aaPredicted RBP12.63□□□□□ -0.39
USP11-207ENST00000478596 SLC29A1Q99808 456 aa12.63□□□□□ -0.39
USP11-207ENST00000478596 HDHD5Q9BXW7 423 aa12.63□□□□□ -0.39
USP11-207ENST00000478596 GABARAPL3Q9BY60 117 aa12.63□□□□□ -0.39
USP11-207ENST00000478596 RERGLQ9H628 205 aa12.63□□□□□ -0.39
USP11-207ENST00000478596 REV1Q9UBZ9 1251 aa12.63□□□□□ -0.39
USP11-207ENST00000478596 TMEFF2Q9UIK5 374 aaPredicted RBP12.63□□□□□ -0.39
USP11-207ENST00000478596 DPRXA6NFQ7 191 aa12.62□□□□□ -0.39
USP11-207ENST00000478596 SHISA9B4DS77 424 aa12.62□□□□□ -0.39
USP11-207ENST00000478596 H7C1C5 153 aa12.62□□□□□ -0.39
USP11-207ENST00000478596 H7C417 338 aa12.62□□□□□ -0.39
USP11-207ENST00000478596 SNAP29O95721 258 aa12.62□□□□□ -0.39
USP11-207ENST00000478596 IGHV3-9P01782 118 aa12.62□□□□□ -0.39
USP11-207ENST00000478596 IGHMP01871 453 aa12.62□□□□□ -0.39
USP11-207ENST00000478596 APEHP13798 732 aaKnown RBP12.62□□□□□ -0.39
USP11-207ENST00000478596 ZNF3P17036 446 aa12.62□□□□□ -0.39
USP11-207ENST00000478596 PAICSP22234 425 aaKnown RBP12.62□□□□□ -0.39
USP11-207ENST00000478596 GRK5P34947 590 aa12.62□□□□□ -0.39
USP11-207ENST00000478596 VHLP40337 213 aa12.62□□□□□ -0.39
USP11-207ENST00000478596 SELENOPP49908 381 aa12.62□□□□□ -0.39
USP11-207ENST00000478596 FXYD6P3P58550 94 aa12.62□□□□□ -0.39
USP11-207ENST00000478596 LCN6P62502 163 aa12.62□□□□□ -0.39
USP11-207ENST00000478596 MYBPC1Q00872 1141 aa12.62□□□□□ -0.39
USP11-207ENST00000478596 NPRL3Q12980 569 aa12.62□□□□□ -0.39
USP11-207ENST00000478596 TAB1Q15750 504 aa12.62□□□□□ -0.39
USP11-207ENST00000478596 SEZ6L2Q6UXD5 910 aa12.62□□□□□ -0.39
USP11-207ENST00000478596 IZUMO2Q6UXV1 221 aa12.62□□□□□ -0.39
USP11-207ENST00000478596 NUFIP2Q7Z417 695 aaKnown RBP12.62□□□□□ -0.39
USP11-207ENST00000478596 ADCK1Q86TW2 530 aa12.62□□□□□ -0.39
USP11-207ENST00000478596 SDR9C7Q8NEX9 313 aa12.62□□□□□ -0.39
USP11-207ENST00000478596 HSD17B8Q92506 261 aa12.62□□□□□ -0.39
USP11-207ENST00000478596 TMEM45BQ96B21 275 aa12.62□□□□□ -0.39
USP11-207ENST00000478596 TXNDC15Q96J42 360 aa12.62□□□□□ -0.39
USP11-207ENST00000478596 Q96M85 177 aa12.62□□□□□ -0.39
USP11-207ENST00000478596 RDH12Q96NR8 316 aa12.62□□□□□ -0.39
USP11-207ENST00000478596 ALKBH3Q96Q83 286 aaPredicted RBP12.62□□□□□ -0.39
USP11-207ENST00000478596 ULBP2Q9BZM5 246 aa12.62□□□□□ -0.39
USP11-207ENST00000478596 CBLN4Q9NTU7 201 aa12.62□□□□□ -0.39
USP11-207ENST00000478596 ASB6Q9NWX5 421 aa12.62□□□□□ -0.39
USP11-207ENST00000478596 IL20Q9NYY1 176 aa12.62□□□□□ -0.39
USP11-207ENST00000478596 KLHL21Q9UJP4 597 aa12.62□□□□□ -0.39
USP11-207ENST00000478596 ZNF346Q9UL40 294 aaKnown RBP12.62□□□□□ -0.39
USP11-207ENST00000478596 LOC102725191A0A1B0GVB3 256 aa12.61□□□□□ -0.39
USP11-207ENST00000478596 NPIPB13A6NJU9 1138 aa12.61□□□□□ -0.39
USP11-207ENST00000478596 OR6C65A6NJZ3 312 aa12.61□□□□□ -0.39
USP11-207ENST00000478596 NPIPB4C9JG80 1138 aa12.61□□□□□ -0.39
USP11-207ENST00000478596 ZNF587BE7ETH6 402 aa12.61□□□□□ -0.39
USP11-207ENST00000478596 M0R3G1 203 aa12.61□□□□□ -0.39
USP11-207ENST00000478596 PTP4A3O75365 173 aa12.61□□□□□ -0.39
USP11-207ENST00000478596 TSPAN19P0C672 248 aa12.61□□□□□ -0.39
USP11-207ENST00000478596 ZNF26P17031 533 aaPredicted RBP12.61□□□□□ -0.39
USP11-207ENST00000478596 CDC42P60953 191 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms